RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 QPCTQ16769 361 aa7.17□□□□□ -1.26
SKA3-207ENST00000536239 TUSC1Q2TAM9 212 aa7.17□□□□□ -1.26
SKA3-207ENST00000536239 LIMD1Q9UGP4 676 aa7.17□□□□□ -1.26
SKA3-207ENST00000536239 LILRB3O75022 631 aa7.16□□□□□ -1.26
SKA3-207ENST00000536239 ZNF385CQ66K41 422 aaPredicted RBP7.16□□□□□ -1.26
SKA3-207ENST00000536239 Q6ZVU0 165 aa7.16□□□□□ -1.26
SKA3-207ENST00000536239 CCDC155Q8N6L0 562 aa7.16□□□□□ -1.26
SKA3-207ENST00000536239 SPINT1O43278 529 aa7.15□□□□□ -1.26
SKA3-207ENST00000536239 CBLBQ13191 982 aa7.15□□□□□ -1.26
SKA3-207ENST00000536239 RNFT1Q5M7Z0 435 aa7.15□□□□□ -1.26
SKA3-207ENST00000536239 PPP1R26Q5T8A7 1209 aaPredicted RBP7.15□□□□□ -1.26
SKA3-207ENST00000536239 MYSM1Q5VVJ2 828 aa7.15□□□□□ -1.26
SKA3-207ENST00000536239 PGPEP1Q9NXJ5 209 aa7.15□□□□□ -1.26
SKA3-207ENST00000536239 SLC35F4A4IF30 521 aa7.14□□□□□ -1.27
SKA3-207ENST00000536239 ERFEQ4G0M1 354 aa7.14□□□□□ -1.27
SKA3-207ENST00000536239 SVOPQ8N4V2 548 aa7.14□□□□□ -1.27
SKA3-207ENST00000536239 HELBQ8NG08 1087 aaPredicted RBP7.14□□□□□ -1.27
SKA3-207ENST00000536239 GPKOWQ92917 476 aaPredicted RBP eCLIP7.14□□□□□ -1.27
SKA3-207ENST00000536239 CARD14Q9BXL6 1004 aa7.14□□□□□ -1.27
SKA3-207ENST00000536239 SLURP2P0DP57 97 aa7.13□□□□□ -1.27
SKA3-207ENST00000536239 RTL5Q5HYW3 569 aaPredicted RBP7.13□□□□□ -1.27
SKA3-207ENST00000536239 ARHGEF15O94989 841 aa7.12□□□□□ -1.27
SKA3-207ENST00000536239 ITGA6P23229 1130 aa7.12□□□□□ -1.27
SKA3-207ENST00000536239 VWA5B2Q8N398 1253 aa7.12□□□□□ -1.27
SKA3-207ENST00000536239 WHAMMQ8TF30 809 aa7.12□□□□□ -1.27
SKA3-207ENST00000536239 AK7Q96M32 723 aa7.12□□□□□ -1.27
SKA3-207ENST00000536239 SV2AQ7L0J3 742 aa7.11□□□□□ -1.27
SKA3-207ENST00000536239 IRS1P35568 1242 aa7.1□□□□□ -1.27
SKA3-207ENST00000536239 PDXDC2PQ6P474 469 aa7.1□□□□□ -1.27
SKA3-207ENST00000536239 KCTD15Q96SI1 283 aaPredicted RBP7.1□□□□□ -1.27
SKA3-207ENST00000536239 DNMT3AQ9Y6K1 912 aaPredicted RBP7.1□□□□□ -1.27
SKA3-207ENST00000536239 CDC14CA4D256 554 aa7.09□□□□□ -1.27
SKA3-207ENST00000536239 CTSOP43234 321 aaPredicted RBP7.09□□□□□ -1.27
SKA3-207ENST00000536239 DHX9Q08211 1270 aaKnown RBP7.09□□□□□ -1.27
SKA3-207ENST00000536239 GPAT2Q6NUI2 795 aa7.09□□□□□ -1.27
SKA3-207ENST00000536239 AGBL1Q96MI9 1066 aa7.09□□□□□ -1.27
SKA3-207ENST00000536239 ARHGAP9Q9BRR9 750 aa7.09□□□□□ -1.27
SKA3-207ENST00000536239 CDV3Q9UKY7 258 aaKnown RBP7.09□□□□□ -1.27
SKA3-207ENST00000536239 IGHA1P01876 353 aa7.08□□□□□ -1.28
SKA3-207ENST00000536239 MARSP56192 900 aaKnown RBP7.08□□□□□ -1.28
SKA3-207ENST00000536239 KANK3Q6NY19 840 aa7.08□□□□□ -1.28
SKA3-207ENST00000536239 SLC10A4Q96EP9 437 aa7.08□□□□□ -1.28
SKA3-207ENST00000536239 CLK2P49760 499 aaKnown RBP7.07□□□□□ -1.28
SKA3-207ENST00000536239 RELBQ01201 579 aa7.07□□□□□ -1.28
SKA3-207ENST00000536239 CTDSPL2Q05D32 466 aa7.07□□□□□ -1.28
SKA3-207ENST00000536239 INSM2Q96T92 566 aaPredicted RBP7.07□□□□□ -1.28
SKA3-207ENST00000536239 SENP3-EIF4A1A0A087X0R7 540 aa7.06□□□□□ -1.28
SKA3-207ENST00000536239 FOXK2Q01167 660 aa7.06□□□□□ -1.28
SKA3-207ENST00000536239 PDE4DQ08499 809 aa7.06□□□□□ -1.28
SKA3-207ENST00000536239 ZBTB33Q86T24 672 aa7.06□□□□□ -1.28
SKA3-207ENST00000536239 SCARF2Q96GP6 870 aaPredicted RBP7.06□□□□□ -1.28
SKA3-207ENST00000536239 FKBPLQ9UIM3 349 aa7.06□□□□□ -1.28
SKA3-207ENST00000536239 ADAMTS2O95450 1211 aa7.05□□□□□ -1.28
SKA3-207ENST00000536239 INTS6LQ5JSJ4 861 aaKnown RBP7.05□□□□□ -1.28
SKA3-207ENST00000536239 RNF217Q8TC41 542 aa7.05□□□□□ -1.28
SKA3-207ENST00000536239 ZNF395Q9H8N7 513 aaPredicted RBP7.05□□□□□ -1.28
SKA3-207ENST00000536239 POLMQ9NP87 494 aaPredicted RBP7.05□□□□□ -1.28
SKA3-207ENST00000536239 LYPD4Q6UWN0 246 aa7.04□□□□□ -1.28
SKA3-207ENST00000536239 POLR3EQ9NVU0 708 aa7.04□□□□□ -1.28
SKA3-207ENST00000536239 SRSF11Q05519 484 aaKnown RBP7.03□□□□□ -1.28
SKA3-207ENST00000536239 LRRN4Q8WUT4 740 aa7.03□□□□□ -1.28
SKA3-207ENST00000536239 OCSTAMPQ9BR26 566 aa7.03□□□□□ -1.28
SKA3-207ENST00000536239 RSPH6AQ9H0K4 717 aa7.03□□□□□ -1.28
SKA3-207ENST00000536239 ZC3H4Q9UPT8 1303 aaKnown RBP7.02□□□□□ -1.28
SKA3-207ENST00000536239 TMPRSS4Q9NRS4 437 aa7.02□□□□□ -1.29
SKA3-207ENST00000536239 CELA2BP08218 269 aaPredicted RBP7.01□□□□□ -1.29
SKA3-207ENST00000536239 MAP3K10Q02779 954 aa7.01□□□□□ -1.29
SKA3-207ENST00000536239 PTK2Q05397 1052 aa7.01□□□□□ -1.29
SKA3-207ENST00000536239 NR6A1Q15406 480 aa7.01□□□□□ -1.29
SKA3-207ENST00000536239 FOXD4L5Q5VV16 416 aaPredicted RBP7.01□□□□□ -1.29
SKA3-207ENST00000536239 ADH1AP07327 375 aa7□□□□□ -1.29
SKA3-207ENST00000536239 ADD1P35611 737 aaKnown RBP7□□□□□ -1.29
SKA3-207ENST00000536239 PTGIRP43119 386 aa7□□□□□ -1.29
SKA3-207ENST00000536239 GAS6Q14393 721 aa7□□□□□ -1.29
SKA3-207ENST00000536239 ZNF784Q8NCA9 323 aaPredicted RBP7□□□□□ -1.29
SKA3-207ENST00000536239 ADAM32Q8TC27 787 aa7□□□□□ -1.29
SKA3-207ENST00000536239 CUEDC1Q9NWM3 386 aaPredicted RBP7□□□□□ -1.29
SKA3-207ENST00000536239 GPSM3Q9Y4H4 160 aa7□□□□□ -1.29
SKA3-207ENST00000536239 LILRA1O75019 489 aa6.99□□□□□ -1.29
SKA3-207ENST00000536239 LYSMD3Q7Z3D4 306 aa6.99□□□□□ -1.29
SKA3-207ENST00000536239 KDF1Q8NAX2 398 aaPredicted RBP6.99□□□□□ -1.29
SKA3-207ENST00000536239 ENAMQ9NRM1 1142 aa6.99□□□□□ -1.29
SKA3-207ENST00000536239 NBPF20Q3BBV1 942 aa6.98□□□□□ -1.29
SKA3-207ENST00000536239 ERVH48-1M5A8F1 160 aa6.97□□□□□ -1.29
SKA3-207ENST00000536239 RAB15P59190 212 aa6.97□□□□□ -1.29
SKA3-207ENST00000536239 CNTNAP5Q8WYK1 1306 aa6.97□□□□□ -1.29
SKA3-207ENST00000536239 FBXO31Q5XUX0 539 aaPredicted RBP6.96□□□□□ -1.3
SKA3-207ENST00000536239 PRICKLE2Q7Z3G6 844 aa6.96□□□□□ -1.3
SKA3-207ENST00000536239 GMCL1Q96IK5 515 aa6.96□□□□□ -1.3
SKA3-207ENST00000536239 SLC24A3Q9HC58 644 aa6.96□□□□□ -1.3
SKA3-207ENST00000536239 MBIPQ9NS73 344 aa6.96□□□□□ -1.3
SKA3-207ENST00000536239 PHF20L1A8MW92 1017 aa6.95□□□□□ -1.3
SKA3-207ENST00000536239 MSTNO14793 375 aa6.95□□□□□ -1.3
SKA3-207ENST00000536239 RNF144AP50876 292 aaPredicted RBP6.95□□□□□ -1.3
SKA3-207ENST00000536239 PLA2G4EQ3MJ16 856 aa6.95□□□□□ -1.3
SKA3-207ENST00000536239 DZIP3Q86Y13 1208 aaKnown RBP6.95□□□□□ -1.3
SKA3-207ENST00000536239 DCAF5Q96JK2 942 aa6.95□□□□□ -1.3
SKA3-207ENST00000536239 ESPNB1AK53 854 aa6.94□□□□□ -1.3
SKA3-207ENST00000536239 ADAM23O75077 832 aa6.94□□□□□ -1.3
SKA3-207ENST00000536239 RHOQP17081 205 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms