RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 SOX12O15370 315 aa18.56■□□□□ 0.56
TNFRSF1A-207ENST00000535958 ZNF692Q9BU19 519 aaPredicted RBP18.56■□□□□ 0.56
TNFRSF1A-207ENST00000535958 CDCA7Q9BWT1 371 aaPredicted RBP18.56■□□□□ 0.56
TNFRSF1A-207ENST00000535958 SPON1Q9HCB6 807 aa18.56■□□□□ 0.56
TNFRSF1A-207ENST00000535958 WNK3Q9BYP7 1800 aa18.56■□□□□ 0.56
TNFRSF1A-207ENST00000535958 AKAP12Q02952 1782 aa18.55■□□□□ 0.56
TNFRSF1A-207ENST00000535958 PEAK1Q9H792 1746 aa18.54■□□□□ 0.56
TNFRSF1A-207ENST00000535958 TTC21BQ7Z4L5 1316 aa18.53■□□□□ 0.56
TNFRSF1A-207ENST00000535958 TTC21AQ8NDW8 1320 aa18.53■□□□□ 0.56
TNFRSF1A-207ENST00000535958 SBF2Q86WG5 1849 aa18.52■□□□□ 0.56
TNFRSF1A-207ENST00000535958 KCNQ2O43526 872 aa18.52■□□□□ 0.56
TNFRSF1A-207ENST00000535958 BCL11BQ9C0K0 894 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1A-207ENST00000535958 KTN1Q86UP2 1357 aaKnown RBP18.52■□□□□ 0.55
TNFRSF1A-207ENST00000535958 COL18A1P39060 1754 aa18.51■□□□□ 0.55
TNFRSF1A-207ENST00000535958 PLSCR1O15162 318 aa18.51■□□□□ 0.55
TNFRSF1A-207ENST00000535958 NEUROD1Q13562 356 aa18.51■□□□□ 0.55
TNFRSF1A-207ENST00000535958 ARHGEF25Q86VW2 580 aa18.5■□□□□ 0.55
TNFRSF1A-207ENST00000535958 CARD10Q9BWT7 1032 aa18.49■□□□□ 0.55
TNFRSF1A-207ENST00000535958 AXIN2Q9Y2T1 843 aa18.49■□□□□ 0.55
TNFRSF1A-207ENST00000535958 CCDC7Q96M83 1385 aa18.49■□□□□ 0.55
TNFRSF1A-207ENST00000535958 NINLQ9Y2I6 1382 aa18.49■□□□□ 0.55
TNFRSF1A-207ENST00000535958 YY1P25490 414 aa18.48■□□□□ 0.55
TNFRSF1A-207ENST00000535958 SIN3AQ96ST3 1273 aa18.48■□□□□ 0.55
TNFRSF1A-207ENST00000535958 ABCC6O95255 1503 aa18.48■□□□□ 0.55
TNFRSF1A-207ENST00000535958 RGPD5Q99666 1765 aa18.47■□□□□ 0.55
TNFRSF1A-207ENST00000535958 EXOC5O00471 708 aa18.47■□□□□ 0.55
TNFRSF1A-207ENST00000535958 MARCH10Q8NA82 808 aaPredicted RBP18.47■□□□□ 0.55
TNFRSF1A-207ENST00000535958 STK32BQ9NY57 414 aa18.46■□□□□ 0.55
TNFRSF1A-207ENST00000535958 BCL9O00512 1426 aa18.46■□□□□ 0.55
TNFRSF1A-207ENST00000535958 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
TNFRSF1A-207ENST00000535958 NFAT5O94916 1531 aa18.45■□□□□ 0.54
TNFRSF1A-207ENST00000535958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.45■□□□□ 0.54
TNFRSF1A-207ENST00000535958 ANO8Q9HCE9 1232 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF1A-207ENST00000535958 TNS2Q63HR2 1409 aa18.45■□□□□ 0.54
TNFRSF1A-207ENST00000535958 HDGFL2Q7Z4V5 671 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF1A-207ENST00000535958 TMC1Q8TDI8 760 aa18.43■□□□□ 0.54
TNFRSF1A-207ENST00000535958 CASZ1Q86V15 1759 aa18.42■□□□□ 0.54
TNFRSF1A-207ENST00000535958 CARD11Q9BXL7 1154 aa18.42■□□□□ 0.54
TNFRSF1A-207ENST00000535958 NLRP2Q9NX02 1062 aa18.42■□□□□ 0.54
TNFRSF1A-207ENST00000535958 SBNO2Q9Y2G9 1366 aa18.42■□□□□ 0.54
TNFRSF1A-207ENST00000535958 ZBTB7AO95365 584 aa18.41■□□□□ 0.54
TNFRSF1A-207ENST00000535958 TXNRD1Q16881 649 aa18.41■□□□□ 0.54
TNFRSF1A-207ENST00000535958 PTF1AQ7RTS3 328 aa18.41■□□□□ 0.54
TNFRSF1A-207ENST00000535958 LTN1O94822 1766 aa18.4■□□□□ 0.54
TNFRSF1A-207ENST00000535958 NHSQ6T4R5 1651 aa18.39■□□□□ 0.53
TNFRSF1A-207ENST00000535958 ERBB3P21860 1342 aa18.39■□□□□ 0.53
TNFRSF1A-207ENST00000535958 USP31Q70CQ4 1352 aa18.39■□□□□ 0.53
TNFRSF1A-207ENST00000535958 USP54Q70EL1 1684 aa18.38■□□□□ 0.53
TNFRSF1A-207ENST00000535958 IL2RBP14784 551 aa18.38■□□□□ 0.53
TNFRSF1A-207ENST00000535958 ACSBG1Q96GR2 724 aa18.38■□□□□ 0.53
TNFRSF1A-207ENST00000535958 SLC15A2Q16348 729 aa18.37■□□□□ 0.53
TNFRSF1A-207ENST00000535958 NME9Q86XW9 330 aa18.37■□□□□ 0.53
TNFRSF1A-207ENST00000535958 PROM2Q8N271 834 aa18.37■□□□□ 0.53
TNFRSF1A-207ENST00000535958 TERF2IPQ9NYB0 399 aa18.37■□□□□ 0.53
TNFRSF1A-207ENST00000535958 MYOM1P52179 1685 aa18.37■□□□□ 0.53
TNFRSF1A-207ENST00000535958 EDC4Q6P2E9 1401 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1A-207ENST00000535958 TONSLQ96HA7 1378 aa18.36■□□□□ 0.53
TNFRSF1A-207ENST00000535958 ATF5Q9Y2D1 282 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF1A-207ENST00000535958 ANKRD24Q8TF21 1146 aa18.35■□□□□ 0.53
TNFRSF1A-207ENST00000535958 PDGFDQ9GZP0 370 aaPredicted RBP18.34■□□□□ 0.53
TNFRSF1A-207ENST00000535958 MTFR1LQ9H019 292 aa18.34■□□□□ 0.53
TNFRSF1A-207ENST00000535958 CD163L1Q9NR16 1453 aa18.33■□□□□ 0.53
TNFRSF1A-207ENST00000535958 A0A1W2PP64 1363 aa18.31■□□□□ 0.52
TNFRSF1A-207ENST00000535958 BTAF1O14981 1849 aa18.31■□□□□ 0.52
TNFRSF1A-207ENST00000535958 KAT6BQ8WYB5 2073 aa18.31■□□□□ 0.52
TNFRSF1A-207ENST00000535958 PTGER2P43116 358 aa18.31■□□□□ 0.52
TNFRSF1A-207ENST00000535958 SLC12A5Q9H2X9 1139 aa18.31■□□□□ 0.52
TNFRSF1A-207ENST00000535958 FAM208AQ9UK61 1670 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1A-207ENST00000535958 LTV1Q96GA3 475 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-207ENST00000535958 FHDC1Q9C0D6 1143 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1A-207ENST00000535958 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.52
TNFRSF1A-207ENST00000535958 COG3Q96JB2 828 aa18.27■□□□□ 0.52
TNFRSF1A-207ENST00000535958 SYT17Q9BSW7 474 aa18.27■□□□□ 0.52
TNFRSF1A-207ENST00000535958 PAPPAQ13219 1627 aa18.27■□□□□ 0.51
TNFRSF1A-207ENST00000535958 SLC24A1O60721 1099 aa18.26■□□□□ 0.51
TNFRSF1A-207ENST00000535958 IP6K1Q92551 441 aa18.26■□□□□ 0.51
TNFRSF1A-207ENST00000535958 SYTL4Q96C24 671 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-207ENST00000535958 PUS7Q96PZ0 661 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-207ENST00000535958 ARXQ96QS3 562 aa18.26■□□□□ 0.51
TNFRSF1A-207ENST00000535958 AMPHP49418 695 aa18.25■□□□□ 0.51
TNFRSF1A-207ENST00000535958 SLC27A3Q5K4L6 730 aa18.24■□□□□ 0.51
TNFRSF1A-207ENST00000535958 POLD1P28340 1107 aa18.23■□□□□ 0.51
TNFRSF1A-207ENST00000535958 KLHL34Q8N239 644 aa18.23■□□□□ 0.51
TNFRSF1A-207ENST00000535958 ZNF827Q17R98 1081 aa18.22■□□□□ 0.51
TNFRSF1A-207ENST00000535958 SGIP1Q9BQI5 828 aa18.21■□□□□ 0.51
TNFRSF1A-207ENST00000535958 SMG6Q86US8 1419 aaKnown RBP18.21■□□□□ 0.51
TNFRSF1A-207ENST00000535958 DOT1LQ8TEK3 1739 aa18.2■□□□□ 0.5
TNFRSF1A-207ENST00000535958 HOXC9P31274 260 aa18.2■□□□□ 0.5
TNFRSF1A-207ENST00000535958 SLC16A10Q8TF71 515 aa18.2■□□□□ 0.5
TNFRSF1A-207ENST00000535958 LRRC4BQ9NT99 713 aa18.2■□□□□ 0.5
TNFRSF1A-207ENST00000535958 TFCP2L1Q9NZI6 479 aa18.2■□□□□ 0.5
TNFRSF1A-207ENST00000535958 MAP3K19Q56UN5 1328 aa18.2■□□□□ 0.5
TNFRSF1A-207ENST00000535958 RTL1A6NKG5 1358 aa18.19■□□□□ 0.5
TNFRSF1A-207ENST00000535958 ANKRD36BQ8N2N9 1353 aa18.19■□□□□ 0.5
TNFRSF1A-207ENST00000535958 MAP3K5Q99683 1374 aa18.19■□□□□ 0.5
TNFRSF1A-207ENST00000535958 ST20-MTHFSA0A0A6YYL1 179 aa18.19■□□□□ 0.5
TNFRSF1A-207ENST00000535958 QSER1Q2KHR3 1735 aa18.19■□□□□ 0.5
TNFRSF1A-207ENST00000535958 CHD4Q14839 1912 aa18.18■□□□□ 0.5
TNFRSF1A-207ENST00000535958 GPR162Q16538 588 aa18.18■□□□□ 0.5
TNFRSF1A-207ENST00000535958 ZNF784Q8NCA9 323 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms