RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 SOX12O15370 315 aa21.77■■□□□ 1.08
VAMP1-205ENST00000535927 HOXC9P31274 260 aa21.77■■□□□ 1.08
VAMP1-205ENST00000535927 EMILIN1Q9Y6C2 1016 aa21.77■■□□□ 1.08
VAMP1-205ENST00000535927 UPF1Q92900 1129 aaKnown RBP eCLIP21.76■■□□□ 1.07
VAMP1-205ENST00000535927 LRP6O75581 1613 aa21.76■■□□□ 1.07
VAMP1-205ENST00000535927 COL14A1Q05707 1796 aaKnown RBP21.75■■□□□ 1.07
VAMP1-205ENST00000535927 PPM1GO15355 546 aaPredicted RBP21.75■■□□□ 1.07
VAMP1-205ENST00000535927 DIAPH1O60610 1272 aaKnown RBP21.74■■□□□ 1.07
VAMP1-205ENST00000535927 FBLN1P23142 703 aa21.74■■□□□ 1.07
VAMP1-205ENST00000535927 COL18A1P39060 1754 aa21.74■■□□□ 1.07
VAMP1-205ENST00000535927 MRS2Q9HD23 443 aa21.73■■□□□ 1.07
VAMP1-205ENST00000535927 FAM83GA6ND36 823 aa21.72■■□□□ 1.07
VAMP1-205ENST00000535927 RXRBP28702 533 aa21.72■■□□□ 1.07
VAMP1-205ENST00000535927 NUTM2BA6NNL0 878 aaPredicted RBP21.71■■□□□ 1.07
VAMP1-205ENST00000535927 NUTM2EB1AL46 878 aaPredicted RBP21.71■■□□□ 1.07
VAMP1-205ENST00000535927 HSP90AB2PQ58FF8 381 aa21.71■■□□□ 1.07
VAMP1-205ENST00000535927 NUTM2AQ8IVF1 878 aaPredicted RBP21.71■■□□□ 1.07
VAMP1-205ENST00000535927 PNNQ9H307 717 aaKnown RBP21.71■■□□□ 1.07
VAMP1-205ENST00000535927 PEAK1Q9H792 1746 aa21.7■■□□□ 1.06
VAMP1-205ENST00000535927 PLEKHG5O94827 1062 aa21.69■■□□□ 1.06
VAMP1-205ENST00000535927 IL13P35225 146 aa21.69■■□□□ 1.06
VAMP1-205ENST00000535927 LMO7Q8WWI1 1683 aa21.69■■□□□ 1.06
VAMP1-205ENST00000535927 NWD2Q9ULI1 1742 aa21.69■■□□□ 1.06
VAMP1-205ENST00000535927 FNBP4Q8N3X1 1017 aaPredicted RBP21.68■■□□□ 1.06
VAMP1-205ENST00000535927 COL3A1P02461 1466 aaPredicted RBP21.68■■□□□ 1.06
VAMP1-205ENST00000535927 FAM208AQ9UK61 1670 aaKnown RBP21.68■■□□□ 1.06
VAMP1-205ENST00000535927 ERBB3P21860 1342 aa21.67■■□□□ 1.06
VAMP1-205ENST00000535927 ADAMTS2O95450 1211 aa21.67■■□□□ 1.06
VAMP1-205ENST00000535927 EIF4A2Q14240 407 aaKnown RBP21.67■■□□□ 1.06
VAMP1-205ENST00000535927 PNISRQ8TF01 805 aaKnown RBP21.67■■□□□ 1.06
VAMP1-205ENST00000535927 AXIN2Q9Y2T1 843 aa21.67■■□□□ 1.06
VAMP1-205ENST00000535927 ZBTB7CA1YPR0 619 aa21.66■■□□□ 1.06
VAMP1-205ENST00000535927 EVA1CP58658 441 aa21.66■■□□□ 1.06
VAMP1-205ENST00000535927 WDR43Q15061 677 aaKnown RBP eCLIP21.66■■□□□ 1.06
VAMP1-205ENST00000535927 CHRNA2Q15822 529 aa21.66■■□□□ 1.06
VAMP1-205ENST00000535927 ANKRD24Q8TF21 1146 aa21.66■■□□□ 1.06
VAMP1-205ENST00000535927 NGLY1Q96IV0 654 aa21.66■■□□□ 1.06
VAMP1-205ENST00000535927 PLEKHG2Q9H7P9 1386 aa21.65■■□□□ 1.06
VAMP1-205ENST00000535927 CAMTA1Q9Y6Y1 1673 aa21.65■■□□□ 1.06
VAMP1-205ENST00000535927 SLIT2O94813 1529 aa21.65■■□□□ 1.06
VAMP1-205ENST00000535927 WDR17Q8IZU2 1322 aa21.64■■□□□ 1.05
VAMP1-205ENST00000535927 FCHSD2O94868 740 aa21.64■■□□□ 1.05
VAMP1-205ENST00000535927 BTG4Q9NY30 223 aa21.64■■□□□ 1.05
VAMP1-205ENST00000535927 RGPD5Q99666 1765 aa21.64■■□□□ 1.05
VAMP1-205ENST00000535927 COL5A2P05997 1499 aaPredicted RBP21.63■■□□□ 1.05
VAMP1-205ENST00000535927 UNC5CLQ8IV45 518 aa21.62■■□□□ 1.05
VAMP1-205ENST00000535927 AFF2P51816 1311 aa21.61■■□□□ 1.05
VAMP1-205ENST00000535927 IGSF1Q8N6C5 1336 aa21.61■■□□□ 1.05
VAMP1-205ENST00000535927 CSB-PGBD3P0DP91 1061 aa21.61■■□□□ 1.05
VAMP1-205ENST00000535927 CARD10Q9BWT7 1032 aa21.61■■□□□ 1.05
VAMP1-205ENST00000535927 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
VAMP1-205ENST00000535927 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
VAMP1-205ENST00000535927 CCDC184Q52MB2 194 aa21.6■■□□□ 1.05
VAMP1-205ENST00000535927 C8orf37Q96NL8 207 aa21.6■■□□□ 1.05
VAMP1-205ENST00000535927 PLCH1Q4KWH8 1693 aa21.6■■□□□ 1.05
VAMP1-205ENST00000535927 NCAPD2Q15021 1401 aa21.59■■□□□ 1.05
VAMP1-205ENST00000535927 EYA1Q99502 592 aa21.59■■□□□ 1.05
VAMP1-205ENST00000535927 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.59■■□□□ 1.05
VAMP1-205ENST00000535927 THRAP3Q9Y2W1 955 aaKnown RBP21.59■■□□□ 1.05
VAMP1-205ENST00000535927 KDRP35968 1356 aa21.59■■□□□ 1.05
VAMP1-205ENST00000535927 CRB1P82279 1406 aa21.58■■□□□ 1.05
VAMP1-205ENST00000535927 U2SURPO15042 1029 aaKnown RBP21.58■■□□□ 1.05
VAMP1-205ENST00000535927 NEFMP07197 916 aa21.58■■□□□ 1.05
VAMP1-205ENST00000535927 LTV1Q96GA3 475 aaPredicted RBP21.58■■□□□ 1.05
VAMP1-205ENST00000535927 RGPD1P0DJD0 1748 aa21.58■■□□□ 1.04
VAMP1-205ENST00000535927 TOM1L2Q6ZVM7 507 aa21.57■■□□□ 1.04
VAMP1-205ENST00000535927 CDCA7Q9BWT1 371 aaPredicted RBP21.57■■□□□ 1.04
VAMP1-205ENST00000535927 NLRP2Q9NX02 1062 aa21.57■■□□□ 1.04
VAMP1-205ENST00000535927 VPS72Q15906 364 aa21.56■■□□□ 1.04
VAMP1-205ENST00000535927 NBPF6Q5VWK0 638 aa21.56■■□□□ 1.04
VAMP1-205ENST00000535927 NGEFQ8N5V2 710 aa21.56■■□□□ 1.04
VAMP1-205ENST00000535927 NBPF4Q96M43 638 aa21.56■■□□□ 1.04
VAMP1-205ENST00000535927 USP21Q9UK80 565 aa21.56■■□□□ 1.04
VAMP1-205ENST00000535927 ADAMTS8Q9UP79 889 aa21.56■■□□□ 1.04
VAMP1-205ENST00000535927 NRAPQ86VF7 1730 aa21.55■■□□□ 1.04
VAMP1-205ENST00000535927 NCBP3Q53F19 620 aaKnown RBP21.55■■□□□ 1.04
VAMP1-205ENST00000535927 BCL9LQ86UU0 1499 aa21.55■■□□□ 1.04
VAMP1-205ENST00000535927 RBM6P78332 1123 aaKnown RBP21.54■■□□□ 1.04
VAMP1-205ENST00000535927 QTRT2Q9H974 415 aaKnown RBP21.54■■□□□ 1.04
VAMP1-205ENST00000535927 STRN4Q9NRL3 753 aa21.54■■□□□ 1.04
VAMP1-205ENST00000535927 SULT6B1Q6IMI4 303 aa21.53■■□□□ 1.04
VAMP1-205ENST00000535927 LARP1Q6PKG0 1096 aaKnown RBP21.53■■□□□ 1.04
VAMP1-205ENST00000535927 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.53■■□□□ 1.04
VAMP1-205ENST00000535927 TRPC5Q9UL62 973 aaPredicted RBP21.53■■□□□ 1.04
VAMP1-205ENST00000535927 FAM9BQ8IZU0 186 aa21.52■■□□□ 1.04
VAMP1-205ENST00000535927 RUNDC1Q96C34 613 aa21.52■■□□□ 1.04
VAMP1-205ENST00000535927 SPATA31A5Q5VU36 1347 aa21.52■■□□□ 1.03
VAMP1-205ENST00000535927 SPATA31A7Q8IWB4 1347 aa21.52■■□□□ 1.03
VAMP1-205ENST00000535927 AMOTQ4VCS5 1084 aa21.51■■□□□ 1.03
VAMP1-205ENST00000535927 BARGINQ6ZT62 677 aa21.51■■□□□ 1.03
VAMP1-205ENST00000535927 TCP11L2Q8N4U5 519 aa21.51■■□□□ 1.03
VAMP1-205ENST00000535927 RAPGEF4Q8WZA2 1011 aa21.51■■□□□ 1.03
VAMP1-205ENST00000535927 RSPH6AQ9H0K4 717 aa21.51■■□□□ 1.03
VAMP1-205ENST00000535927 SPATA31A1Q5TZJ5 1347 aa21.5■■□□□ 1.03
VAMP1-205ENST00000535927 RGS12O14924 1447 aa21.49■■□□□ 1.03
VAMP1-205ENST00000535927 RGPD2P0DJD1 1756 aa21.48■■□□□ 1.03
VAMP1-205ENST00000535927 TATP17735 454 aaPredicted RBP21.48■■□□□ 1.03
VAMP1-205ENST00000535927 PLEKHF1Q96S99 279 aa21.48■■□□□ 1.03
VAMP1-205ENST00000535927 MAPK8IP3Q9UPT6 1336 aa21.48■■□□□ 1.03
VAMP1-205ENST00000535927 HMOX1P09601 288 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms