RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
UBB-204ENST00000535788 TNS1Q9HBL0 1735 aaKnown RBP12.99□□□□□ -0.33
UBB-204ENST00000535788 PHRF1Q9P1Y6 1649 aaKnown RBP12.99□□□□□ -0.33
UBB-204ENST00000535788 NINLQ9Y2I6 1382 aa12.98□□□□□ -0.33
UBB-204ENST00000535788 CABP1Q9NZU7 370 aa12.98□□□□□ -0.33
UBB-204ENST00000535788 USP6P35125 1406 aa12.97□□□□□ -0.33
UBB-204ENST00000535788 NUTM2GQ5VZR2 741 aa12.97□□□□□ -0.33
UBB-204ENST00000535788 USP35Q9P2H5 1018 aa12.96□□□□□ -0.33
UBB-204ENST00000535788 COL14A1Q05707 1796 aaKnown RBP12.96□□□□□ -0.34
UBB-204ENST00000535788 BRD4O60885 1362 aaPredicted RBP12.95□□□□□ -0.34
UBB-204ENST00000535788 PARD3Q8TEW0 1356 aa12.95□□□□□ -0.34
UBB-204ENST00000535788 NRKQ7Z2Y5 1582 aa12.95□□□□□ -0.34
UBB-204ENST00000535788 AKAP12Q02952 1782 aa12.95□□□□□ -0.34
UBB-204ENST00000535788 ABTB2Q8N961 1025 aa12.95□□□□□ -0.34
UBB-204ENST00000535788 CCER1Q8TC90 406 aaPredicted RBP12.95□□□□□ -0.34
UBB-204ENST00000535788 STRN4Q9NRL3 753 aa12.95□□□□□ -0.34
UBB-204ENST00000535788 NRAPQ86VF7 1730 aa12.95□□□□□ -0.34
UBB-204ENST00000535788 NEFLP07196 543 aa12.94□□□□□ -0.34
UBB-204ENST00000535788 PDE3BQ13370 1112 aa12.94□□□□□ -0.34
UBB-204ENST00000535788 CEP350Q5VT06 3117 aa12.93□□□□□ -0.34
UBB-204ENST00000535788 PRDM11Q9NQV5 511 aa12.93□□□□□ -0.34
UBB-204ENST00000535788 SSH2Q76I76 1423 aa12.93□□□□□ -0.34
UBB-204ENST00000535788 KIAA0232Q92628 1395 aa12.93□□□□□ -0.34
UBB-204ENST00000535788 USP47Q96K76 1375 aa12.93□□□□□ -0.34
UBB-204ENST00000535788 PIK3C2AO00443 1686 aa12.93□□□□□ -0.34
UBB-204ENST00000535788 USP19O94966 1318 aa12.92□□□□□ -0.34
UBB-204ENST00000535788 ST20-MTHFSA0A0A6YYL1 179 aa12.92□□□□□ -0.34
UBB-204ENST00000535788 MON2Q7Z3U7 1717 aa12.92□□□□□ -0.34
UBB-204ENST00000535788 SPATA31A1Q5TZJ5 1347 aa12.91□□□□□ -0.34
UBB-204ENST00000535788 CPSF1Q10570 1443 aaKnown RBP12.91□□□□□ -0.34
UBB-204ENST00000535788 ZBTB7CA1YPR0 619 aa12.91□□□□□ -0.34
UBB-204ENST00000535788 ZBTB7AO95365 584 aa12.91□□□□□ -0.34
UBB-204ENST00000535788 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
UBB-204ENST00000535788 NLRP13Q86W25 1043 aa12.91□□□□□ -0.34
UBB-204ENST00000535788 TESK2Q96S53 571 aa12.91□□□□□ -0.34
UBB-204ENST00000535788 PDGFDQ9GZP0 370 aaPredicted RBP12.91□□□□□ -0.34
UBB-204ENST00000535788 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
UBB-204ENST00000535788 NUP188Q5SRE5 1749 aa12.91□□□□□ -0.34
UBB-204ENST00000535788 ZC3H6P61129 1189 aaKnown RBP12.9□□□□□ -0.34
UBB-204ENST00000535788 PDE4CQ08493 712 aa12.9□□□□□ -0.34
UBB-204ENST00000535788 CHRNA2Q15822 529 aa12.9□□□□□ -0.34
UBB-204ENST00000535788 TAF7LQ5H9L4 462 aa12.9□□□□□ -0.34
UBB-204ENST00000535788 TMC1Q8TDI8 760 aa12.9□□□□□ -0.34
UBB-204ENST00000535788 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
UBB-204ENST00000535788 FOXD4L1Q9NU39 408 aa12.9□□□□□ -0.34
UBB-204ENST00000535788 KTN1Q86UP2 1357 aaKnown RBP12.9□□□□□ -0.34
UBB-204ENST00000535788 THSD7AQ9UPZ6 1657 aa12.89□□□□□ -0.35
UBB-204ENST00000535788 TTC21BQ7Z4L5 1316 aa12.89□□□□□ -0.35
UBB-204ENST00000535788 SLIT3O75094 1523 aa12.89□□□□□ -0.35
UBB-204ENST00000535788 NLRP6P59044 892 aa12.89□□□□□ -0.35
UBB-204ENST00000535788 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
UBB-204ENST00000535788 RREB1Q92766 1687 aa12.89□□□□□ -0.35
UBB-204ENST00000535788 EVA1CP58658 441 aa12.88□□□□□ -0.35
UBB-204ENST00000535788 FHDC1Q9C0D6 1143 aaPredicted RBP12.88□□□□□ -0.35
UBB-204ENST00000535788 CPDO75976 1380 aa12.88□□□□□ -0.35
UBB-204ENST00000535788 TTC21AQ8NDW8 1320 aa12.88□□□□□ -0.35
UBB-204ENST00000535788 LMO7Q8WWI1 1683 aa12.87□□□□□ -0.35
UBB-204ENST00000535788 GIGYF1O75420 1035 aaPredicted RBP12.87□□□□□ -0.35
UBB-204ENST00000535788 GCP02774 474 aa12.87□□□□□ -0.35
UBB-204ENST00000535788 PUS7Q96PZ0 661 aaKnown RBP12.87□□□□□ -0.35
UBB-204ENST00000535788 SYT17Q9BSW7 474 aa12.87□□□□□ -0.35
UBB-204ENST00000535788 SLC12A5Q9H2X9 1139 aa12.87□□□□□ -0.35
UBB-204ENST00000535788 A0A1W2PP64 1363 aa12.86□□□□□ -0.35
UBB-204ENST00000535788 HDGFL2Q7Z4V5 671 aaPredicted RBP12.86□□□□□ -0.35
UBB-204ENST00000535788 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
UBB-204ENST00000535788 PTGER2P43116 358 aa12.85□□□□□ -0.35
UBB-204ENST00000535788 TMF1P82094 1093 aa12.85□□□□□ -0.35
UBB-204ENST00000535788 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
UBB-204ENST00000535788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.85□□□□□ -0.35
UBB-204ENST00000535788 BCL11BQ9C0K0 894 aaPredicted RBP12.85□□□□□ -0.35
UBB-204ENST00000535788 TERF2IPQ9NYB0 399 aa12.85□□□□□ -0.35
UBB-204ENST00000535788 CHD4Q14839 1912 aa12.84□□□□□ -0.35
UBB-204ENST00000535788 EDC4Q6P2E9 1401 aaKnown RBP12.84□□□□□ -0.35
UBB-204ENST00000535788 USP54Q70EL1 1684 aa12.83□□□□□ -0.35
UBB-204ENST00000535788 SOX12O15370 315 aa12.83□□□□□ -0.36
UBB-204ENST00000535788 NME9Q86XW9 330 aa12.83□□□□□ -0.36
UBB-204ENST00000535788 NFAT5O94916 1531 aa12.83□□□□□ -0.36
UBB-204ENST00000535788 USP31Q70CQ4 1352 aa12.82□□□□□ -0.36
UBB-204ENST00000535788 BARGINQ6ZT62 677 aa12.82□□□□□ -0.36
UBB-204ENST00000535788 KCNH5Q8NCM2 988 aa12.82□□□□□ -0.36
UBB-204ENST00000535788 CFAP44Q96MT7 982 aa12.82□□□□□ -0.36
UBB-204ENST00000535788 COL5A2P05997 1499 aaPredicted RBP12.82□□□□□ -0.36
UBB-204ENST00000535788 AATKQ6ZMQ8 1374 aa12.81□□□□□ -0.36
UBB-204ENST00000535788 COL18A1P39060 1754 aa12.81□□□□□ -0.36
UBB-204ENST00000535788 MYOM1P52179 1685 aa12.81□□□□□ -0.36
UBB-204ENST00000535788 GPR162Q16538 588 aa12.81□□□□□ -0.36
UBB-204ENST00000535788 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
UBB-204ENST00000535788 BBXQ8WY36 941 aaPredicted RBP12.81□□□□□ -0.36
UBB-204ENST00000535788 PLSCR1O15162 318 aa12.8□□□□□ -0.36
UBB-204ENST00000535788 CDCA8Q53HL2 280 aa12.8□□□□□ -0.36
UBB-204ENST00000535788 TCP11L2Q8N4U5 519 aa12.8□□□□□ -0.36
UBB-204ENST00000535788 ANKRD36BQ8N2N9 1353 aa12.8□□□□□ -0.36
UBB-204ENST00000535788 OVOS2A0A0J9YW53 1432 aa12.79□□□□□ -0.36
UBB-204ENST00000535788 OVOS2Q6IE36 1432 aa12.79□□□□□ -0.36
UBB-204ENST00000535788 IGSF3O75054 1194 aa12.79□□□□□ -0.36
UBB-204ENST00000535788 PTF1AQ7RTS3 328 aa12.79□□□□□ -0.36
UBB-204ENST00000535788 ARHGEF25Q86VW2 580 aa12.79□□□□□ -0.36
UBB-204ENST00000535788 PROM2Q8N271 834 aa12.78□□□□□ -0.36
UBB-204ENST00000535788 STK32BQ9NY57 414 aa12.78□□□□□ -0.36
UBB-204ENST00000535788 RGPD5Q99666 1765 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms