RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 NLRP13Q86W25 1043 aa12.06□□□□□ -0.48
CD4-204ENST00000535707 USP19O94966 1318 aa12.06□□□□□ -0.48
CD4-204ENST00000535707 SLIT3O75094 1523 aa12.06□□□□□ -0.48
CD4-204ENST00000535707 CRYBG1Q9Y4K1 1723 aa12.06□□□□□ -0.48
CD4-204ENST00000535707 JCADQ9P266 1359 aa12.05□□□□□ -0.48
CD4-204ENST00000535707 ABTB2Q8N961 1025 aa12.05□□□□□ -0.48
CD4-204ENST00000535707 MARF1Q9Y4F3 1742 aaKnown RBP12.05□□□□□ -0.48
CD4-204ENST00000535707 PNPLA6Q8IY17 1366 aa12.05□□□□□ -0.48
CD4-204ENST00000535707 PAK3O75914 559 aaPredicted RBP12.04□□□□□ -0.48
CD4-204ENST00000535707 C1QBPQ07021 282 aaKnown RBP12.04□□□□□ -0.48
CD4-204ENST00000535707 KCNH5Q8NCM2 988 aa12.04□□□□□ -0.48
CD4-204ENST00000535707 ABCC6O95255 1503 aa12.03□□□□□ -0.48
CD4-204ENST00000535707 DDX17Q92841 729 aaKnown RBP12.03□□□□□ -0.48
CD4-204ENST00000535707 COG3Q96JB2 828 aa12.03□□□□□ -0.48
CD4-204ENST00000535707 SPATA31A6Q5VVP1 1343 aa12.03□□□□□ -0.48
CD4-204ENST00000535707 PHRF1Q9P1Y6 1649 aaKnown RBP12.03□□□□□ -0.48
CD4-204ENST00000535707 KIF24Q5T7B8 1368 aa12.03□□□□□ -0.48
CD4-204ENST00000535707 AATKQ6ZMQ8 1374 aa12.03□□□□□ -0.48
CD4-204ENST00000535707 ABCA3Q99758 1704 aa12.03□□□□□ -0.48
CD4-204ENST00000535707 RIOK3O14730 519 aaKnown RBP12.02□□□□□ -0.49
CD4-204ENST00000535707 NLRP6P59044 892 aa12.02□□□□□ -0.49
CD4-204ENST00000535707 XPCQ01831 940 aaPredicted RBP12.02□□□□□ -0.49
CD4-204ENST00000535707 NME9Q86XW9 330 aa12.02□□□□□ -0.49
CD4-204ENST00000535707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.02□□□□□ -0.49
CD4-204ENST00000535707 HSPA1LP34931 641 aa12.01□□□□□ -0.49
CD4-204ENST00000535707 RALBP1Q15311 655 aa12.01□□□□□ -0.49
CD4-204ENST00000535707 CPDO75976 1380 aa12.01□□□□□ -0.49
CD4-204ENST00000535707 PARD3Q8TEW0 1356 aa12.01□□□□□ -0.49
CD4-204ENST00000535707 NFAT5O94916 1531 aa12.01□□□□□ -0.49
CD4-204ENST00000535707 GCP02774 474 aa11.99□□□□□ -0.49
CD4-204ENST00000535707 HOMEZQ8IX15 550 aa11.99□□□□□ -0.49
CD4-204ENST00000535707 GGNBP2Q9H3C7 697 aa11.99□□□□□ -0.49
CD4-204ENST00000535707 SMG6Q86US8 1419 aaKnown RBP11.99□□□□□ -0.49
CD4-204ENST00000535707 RTL1A6NKG5 1358 aa11.98□□□□□ -0.49
CD4-204ENST00000535707 LMOD2Q6P5Q4 547 aa11.98□□□□□ -0.49
CD4-204ENST00000535707 MORC1Q86VD1 984 aa11.98□□□□□ -0.49
CD4-204ENST00000535707 STK25O00506 426 aa11.97□□□□□ -0.49
CD4-204ENST00000535707 PRKRIP1Q9H875 184 aaPredicted RBP11.96□□□□□ -0.49
CD4-204ENST00000535707 COL14A1Q05707 1796 aaKnown RBP11.95□□□□□ -0.5
CD4-204ENST00000535707 ANP32CO43423 234 aa11.95□□□□□ -0.5
CD4-204ENST00000535707 CC2D1BQ5T0F9 858 aaKnown RBP11.95□□□□□ -0.5
CD4-204ENST00000535707 DCAF8Q5TAQ9 597 aa11.95□□□□□ -0.5
CD4-204ENST00000535707 ARHGEF25Q86VW2 580 aa11.95□□□□□ -0.5
CD4-204ENST00000535707 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
CD4-204ENST00000535707 CDK12Q9NYV4 1490 aaPredicted RBP11.95□□□□□ -0.5
CD4-204ENST00000535707 BLMP54132 1417 aaPredicted RBP11.94□□□□□ -0.5
CD4-204ENST00000535707 INSRP06213 1382 aa11.94□□□□□ -0.5
CD4-204ENST00000535707 DIEXFQ68CQ4 756 aaKnown RBP11.94□□□□□ -0.5
CD4-204ENST00000535707 LTN1O94822 1766 aa11.94□□□□□ -0.5
CD4-204ENST00000535707 LMO7Q8WWI1 1683 aa11.94□□□□□ -0.5
CD4-204ENST00000535707 MYBBP1AQ9BQG0 1328 aaKnown RBP11.93□□□□□ -0.5
CD4-204ENST00000535707 NUTM2GQ5VZR2 741 aa11.93□□□□□ -0.5
CD4-204ENST00000535707 NWD2Q9ULI1 1742 aa11.93□□□□□ -0.5
CD4-204ENST00000535707 FLT4P35916 1363 aa11.92□□□□□ -0.5
CD4-204ENST00000535707 COL18A1P39060 1754 aa11.92□□□□□ -0.5
CD4-204ENST00000535707 NUBP1P53384 320 aa11.92□□□□□ -0.5
CD4-204ENST00000535707 POLKQ9UBT6 870 aa11.92□□□□□ -0.5
CD4-204ENST00000535707 MAP2P11137 1827 aaKnown RBP11.92□□□□□ -0.5
CD4-204ENST00000535707 KIAA0232Q92628 1395 aa11.92□□□□□ -0.5
CD4-204ENST00000535707 MAP3K19Q56UN5 1328 aa11.91□□□□□ -0.5
CD4-204ENST00000535707 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
CD4-204ENST00000535707 LRP6O75581 1613 aa11.91□□□□□ -0.5
CD4-204ENST00000535707 PPP2R1AP30153 589 aa11.91□□□□□ -0.5
CD4-204ENST00000535707 DSG3P32926 999 aa11.91□□□□□ -0.5
CD4-204ENST00000535707 CABLES1Q8TDN4 633 aa11.91□□□□□ -0.5
CD4-204ENST00000535707 IP6K1Q92551 441 aa11.91□□□□□ -0.5
CD4-204ENST00000535707 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.9□□□□□ -0.5
CD4-204ENST00000535707 SLIT2O94813 1529 aa11.9□□□□□ -0.5
CD4-204ENST00000535707 PEAK1Q9H792 1746 aa11.89□□□□□ -0.51
CD4-204ENST00000535707 FNBP4Q8N3X1 1017 aaPredicted RBP11.89□□□□□ -0.51
CD4-204ENST00000535707 CFAP53Q96M91 514 aa11.89□□□□□ -0.51
CD4-204ENST00000535707 PRDM11Q9NQV5 511 aa11.89□□□□□ -0.51
CD4-204ENST00000535707 RYDENQ9NUL5 291 aaKnown RBP11.89□□□□□ -0.51
CD4-204ENST00000535707 PLCH1Q4KWH8 1693 aa11.89□□□□□ -0.51
CD4-204ENST00000535707 HOXC9P31274 260 aa11.88□□□□□ -0.51
CD4-204ENST00000535707 AMPHP49418 695 aa11.88□□□□□ -0.51
CD4-204ENST00000535707 MTHFSP49914 203 aa11.88□□□□□ -0.51
CD4-204ENST00000535707 ZC3H6P61129 1189 aaKnown RBP11.88□□□□□ -0.51
CD4-204ENST00000535707 PLEKHG2Q9H7P9 1386 aa11.88□□□□□ -0.51
CD4-204ENST00000535707 NRAPQ86VF7 1730 aa11.87□□□□□ -0.51
CD4-204ENST00000535707 FAM83GA6ND36 823 aa11.87□□□□□ -0.51
CD4-204ENST00000535707 RRS1Q15050 365 aaKnown RBP11.87□□□□□ -0.51
CD4-204ENST00000535707 EMILIN1Q9Y6C2 1016 aa11.87□□□□□ -0.51
CD4-204ENST00000535707 COL3A1P02461 1466 aaPredicted RBP11.87□□□□□ -0.51
CD4-204ENST00000535707 COL5A2P05997 1499 aaPredicted RBP11.87□□□□□ -0.51
CD4-204ENST00000535707 CAMTA1Q9Y6Y1 1673 aa11.87□□□□□ -0.51
CD4-204ENST00000535707 NUTM2BA6NNL0 878 aaPredicted RBP11.86□□□□□ -0.51
CD4-204ENST00000535707 NUTM2EB1AL46 878 aaPredicted RBP11.86□□□□□ -0.51
CD4-204ENST00000535707 CCER2I3L3R5 266 aa11.86□□□□□ -0.51
CD4-204ENST00000535707 TNNT2P45379 298 aaPredicted RBP11.86□□□□□ -0.51
CD4-204ENST00000535707 ILDR1Q86SU0 546 aaPredicted RBP11.86□□□□□ -0.51
CD4-204ENST00000535707 NUTM2AQ8IVF1 878 aaPredicted RBP11.86□□□□□ -0.51
CD4-204ENST00000535707 ERBB3P21860 1342 aa11.86□□□□□ -0.51
CD4-204ENST00000535707 SOX12O15370 315 aa11.85□□□□□ -0.51
CD4-204ENST00000535707 ADAMTS2O95450 1211 aa11.85□□□□□ -0.51
CD4-204ENST00000535707 STK24Q9Y6E0 443 aa11.85□□□□□ -0.51
CD4-204ENST00000535707 NCAPD2Q15021 1401 aa11.85□□□□□ -0.51
CD4-204ENST00000535707 WDR17Q8IZU2 1322 aa11.85□□□□□ -0.51
CD4-204ENST00000535707 BCL9LQ86UU0 1499 aa11.84□□□□□ -0.51
CD4-204ENST00000535707 RGPD1P0DJD0 1748 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms