RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 TERF2IPQ9NYB0 399 aa13.25□□□□□ -0.29
CDCA3-204ENST00000535406 NFAT5O94916 1531 aa13.24□□□□□ -0.29
CDCA3-204ENST00000535406 SPATA31A1Q5TZJ5 1347 aa13.24□□□□□ -0.29
CDCA3-204ENST00000535406 EVA1CP58658 441 aa13.24□□□□□ -0.29
CDCA3-204ENST00000535406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDCA3-204ENST00000535406 KCNH5Q8NCM2 988 aa13.24□□□□□ -0.29
CDCA3-204ENST00000535406 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
CDCA3-204ENST00000535406 USP31Q70CQ4 1352 aa13.23□□□□□ -0.29
CDCA3-204ENST00000535406 SOX12O15370 315 aa13.23□□□□□ -0.29
CDCA3-204ENST00000535406 KRT27Q7Z3Y8 459 aa13.23□□□□□ -0.29
CDCA3-204ENST00000535406 COL18A1P39060 1754 aa13.22□□□□□ -0.29
CDCA3-204ENST00000535406 LARP1Q6PKG0 1096 aaKnown RBP13.22□□□□□ -0.29
CDCA3-204ENST00000535406 USP35Q9P2H5 1018 aa13.22□□□□□ -0.29
CDCA3-204ENST00000535406 ABCC6O95255 1503 aa13.22□□□□□ -0.29
CDCA3-204ENST00000535406 BLMP54132 1417 aaPredicted RBP13.22□□□□□ -0.29
CDCA3-204ENST00000535406 ANKRD36BQ8N2N9 1353 aa13.21□□□□□ -0.29
CDCA3-204ENST00000535406 NME9Q86XW9 330 aa13.21□□□□□ -0.29
CDCA3-204ENST00000535406 CCDC125Q86Z20 511 aa13.21□□□□□ -0.29
CDCA3-204ENST00000535406 CRB1P82279 1406 aa13.21□□□□□ -0.3
CDCA3-204ENST00000535406 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
CDCA3-204ENST00000535406 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
CDCA3-204ENST00000535406 OVOS2A0A0J9YW53 1432 aa13.2□□□□□ -0.3
CDCA3-204ENST00000535406 OVOS2Q6IE36 1432 aa13.2□□□□□ -0.3
CDCA3-204ENST00000535406 LTN1O94822 1766 aa13.2□□□□□ -0.3
CDCA3-204ENST00000535406 BARGINQ6ZT62 677 aa13.19□□□□□ -0.3
CDCA3-204ENST00000535406 ARHGEF25Q86VW2 580 aa13.19□□□□□ -0.3
CDCA3-204ENST00000535406 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
CDCA3-204ENST00000535406 MYOM1P52179 1685 aa13.19□□□□□ -0.3
CDCA3-204ENST00000535406 RGPD5Q99666 1765 aa13.19□□□□□ -0.3
CDCA3-204ENST00000535406 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
CDCA3-204ENST00000535406 PARP4Q9UKK3 1724 aaKnown RBP13.18□□□□□ -0.3
CDCA3-204ENST00000535406 WNK3Q9BYP7 1800 aa13.18□□□□□ -0.3
CDCA3-204ENST00000535406 SF3B2Q13435 895 aaKnown RBP13.17□□□□□ -0.3
CDCA3-204ENST00000535406 WDR17Q8IZU2 1322 aa13.17□□□□□ -0.3
CDCA3-204ENST00000535406 RGPD1P0DJD0 1748 aa13.17□□□□□ -0.3
CDCA3-204ENST00000535406 TOM1L2Q6ZVM7 507 aa13.16□□□□□ -0.3
CDCA3-204ENST00000535406 AXIN2Q9Y2T1 843 aa13.16□□□□□ -0.3
CDCA3-204ENST00000535406 FAM182BQ5T319 152 aa13.15□□□□□ -0.3
CDCA3-204ENST00000535406 LRRC37A3O60309 1634 aa13.15□□□□□ -0.3
CDCA3-204ENST00000535406 KIF20BQ96Q89 1820 aa13.15□□□□□ -0.3
CDCA3-204ENST00000535406 CSB-PGBD3P0DP91 1061 aa13.14□□□□□ -0.31
CDCA3-204ENST00000535406 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDCA3-204ENST00000535406 COG3Q96JB2 828 aa13.14□□□□□ -0.31
CDCA3-204ENST00000535406 PDE3BQ13370 1112 aa13.13□□□□□ -0.31
CDCA3-204ENST00000535406 TNS1Q9HBL0 1735 aaKnown RBP13.13□□□□□ -0.31
CDCA3-204ENST00000535406 ERBB3P21860 1342 aa13.12□□□□□ -0.31
CDCA3-204ENST00000535406 CCDC7Q96M83 1385 aa13.12□□□□□ -0.31
CDCA3-204ENST00000535406 HSPA5P11021 654 aaKnown RBP13.12□□□□□ -0.31
CDCA3-204ENST00000535406 FAM196AQ6ZSG2 479 aa13.12□□□□□ -0.31
CDCA3-204ENST00000535406 DEFB132Q7Z7B7 95 aa13.12□□□□□ -0.31
CDCA3-204ENST00000535406 NSD3Q9BZ95 1437 aa13.11□□□□□ -0.31
CDCA3-204ENST00000535406 BAG6P46379 1132 aa13.11□□□□□ -0.31
CDCA3-204ENST00000535406 POLR3GLQ9BT43 218 aa13.11□□□□□ -0.31
CDCA3-204ENST00000535406 CARD10Q9BWT7 1032 aa13.11□□□□□ -0.31
CDCA3-204ENST00000535406 FAM208AQ9UK61 1670 aaKnown RBP13.1□□□□□ -0.31
CDCA3-204ENST00000535406 DDB1Q16531 1140 aa13.1□□□□□ -0.31
CDCA3-204ENST00000535406 CDCA7Q9BWT1 371 aaPredicted RBP13.1□□□□□ -0.31
CDCA3-204ENST00000535406 GGNBP2Q9H3C7 697 aa13.1□□□□□ -0.31
CDCA3-204ENST00000535406 OVOS2A0A0G2JMS6 1433 aa13.1□□□□□ -0.31
CDCA3-204ENST00000535406 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
CDCA3-204ENST00000535406 FYB1O15117 783 aa13.09□□□□□ -0.31
CDCA3-204ENST00000535406 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-204ENST00000535406 ANKRD24Q8TF21 1146 aa13.09□□□□□ -0.31
CDCA3-204ENST00000535406 PEAK1Q9H792 1746 aa13.09□□□□□ -0.31
CDCA3-204ENST00000535406 MAP3K19Q56UN5 1328 aa13.08□□□□□ -0.31
CDCA3-204ENST00000535406 RTL1A6NKG5 1358 aa13.08□□□□□ -0.32
CDCA3-204ENST00000535406 TNS2Q63HR2 1409 aa13.08□□□□□ -0.32
CDCA3-204ENST00000535406 TRIM37O94972 964 aa13.08□□□□□ -0.32
CDCA3-204ENST00000535406 IP6K1Q92551 441 aa13.08□□□□□ -0.32
CDCA3-204ENST00000535406 NLRP2Q9NX02 1062 aa13.08□□□□□ -0.32
CDCA3-204ENST00000535406 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
CDCA3-204ENST00000535406 C11orf95C9JLR9 678 aaPredicted RBP13.07□□□□□ -0.32
CDCA3-204ENST00000535406 AMPHP49418 695 aa13.07□□□□□ -0.32
CDCA3-204ENST00000535406 CARD14Q9BXL6 1004 aa13.07□□□□□ -0.32
CDCA3-204ENST00000535406 HOXC9P31274 260 aa13.06□□□□□ -0.32
CDCA3-204ENST00000535406 FBLN1P23142 703 aa13.05□□□□□ -0.32
CDCA3-204ENST00000535406 EN1Q05925 392 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-204ENST00000535406 RRS1Q15050 365 aaKnown RBP13.05□□□□□ -0.32
CDCA3-204ENST00000535406 LTV1Q96GA3 475 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-204ENST00000535406 ATF5Q9Y2D1 282 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-204ENST00000535406 CGNL1Q0VF96 1302 aa13.05□□□□□ -0.32
CDCA3-204ENST00000535406 SMG6Q86US8 1419 aaKnown RBP13.04□□□□□ -0.32
CDCA3-204ENST00000535406 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
CDCA3-204ENST00000535406 IL2RBP14784 551 aa13.04□□□□□ -0.32
CDCA3-204ENST00000535406 ANKRD26Q9UPS8 1709 aa13.04□□□□□ -0.32
CDCA3-204ENST00000535406 PARD3Q8TEW0 1356 aa13.04□□□□□ -0.32
CDCA3-204ENST00000535406 EXOC5O00471 708 aa13.03□□□□□ -0.32
CDCA3-204ENST00000535406 APBA3O96018 575 aa13.03□□□□□ -0.32
CDCA3-204ENST00000535406 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
CDCA3-204ENST00000535406 FLT4P35916 1363 aa13.03□□□□□ -0.32
CDCA3-204ENST00000535406 BCL9O00512 1426 aa13.03□□□□□ -0.32
CDCA3-204ENST00000535406 RREB1Q92766 1687 aa13.02□□□□□ -0.32
CDCA3-204ENST00000535406 RGPD2P0DJD1 1756 aa13.02□□□□□ -0.32
CDCA3-204ENST00000535406 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.33
CDCA3-204ENST00000535406 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
CDCA3-204ENST00000535406 RGPD3A6NKT7 1758 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-204ENST00000535406 RGPD4Q7Z3J3 1758 aa13.01□□□□□ -0.33
CDCA3-204ENST00000535406 NUP188Q5SRE5 1749 aa13□□□□□ -0.33
CDCA3-204ENST00000535406 INSRP06213 1382 aa13□□□□□ -0.33
CDCA3-204ENST00000535406 CAMKK2Q96RR4 588 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms