RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 STRN4Q9NRL3 753 aa17.92■□□□□ 0.46
TMEM258-202ENST00000535042 EMILIN1Q9Y6C2 1016 aa17.92■□□□□ 0.46
TMEM258-202ENST00000535042 IP6K1Q92551 441 aa17.91■□□□□ 0.46
TMEM258-202ENST00000535042 POLKQ9UBT6 870 aa17.91■□□□□ 0.46
TMEM258-202ENST00000535042 TRPC5Q9UL62 973 aaPredicted RBP17.91■□□□□ 0.46
TMEM258-202ENST00000535042 ANKRD26Q9UPS8 1709 aa17.91■□□□□ 0.46
TMEM258-202ENST00000535042 NRAPQ86VF7 1730 aa17.9■□□□□ 0.46
TMEM258-202ENST00000535042 NWD2Q9ULI1 1742 aa17.9■□□□□ 0.46
TMEM258-202ENST00000535042 HOXC9P31274 260 aa17.9■□□□□ 0.46
TMEM258-202ENST00000535042 AMPHP49418 695 aa17.9■□□□□ 0.46
TMEM258-202ENST00000535042 VPS72Q15906 364 aa17.9■□□□□ 0.46
TMEM258-202ENST00000535042 COL5A2P05997 1499 aaPredicted RBP17.89■□□□□ 0.45
TMEM258-202ENST00000535042 EVA1CP58658 441 aa17.89■□□□□ 0.45
TMEM258-202ENST00000535042 LARP1Q6PKG0 1096 aaKnown RBP17.89■□□□□ 0.45
TMEM258-202ENST00000535042 LTN1O94822 1766 aa17.88■□□□□ 0.45
TMEM258-202ENST00000535042 ABCC6O95255 1503 aa17.88■□□□□ 0.45
TMEM258-202ENST00000535042 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.87■□□□□ 0.45
TMEM258-202ENST00000535042 PEAK1Q9H792 1746 aa17.87■□□□□ 0.45
TMEM258-202ENST00000535042 HSP90AB2PQ58FF8 381 aa17.87■□□□□ 0.45
TMEM258-202ENST00000535042 GJD4Q96KN9 370 aaPredicted RBP17.87■□□□□ 0.45
TMEM258-202ENST00000535042 PPM1GO15355 546 aaPredicted RBP17.86■□□□□ 0.45
TMEM258-202ENST00000535042 ANKRD24Q8TF21 1146 aa17.86■□□□□ 0.45
TMEM258-202ENST00000535042 CCDC9Q9Y3X0 531 aaKnown RBP17.86■□□□□ 0.45
TMEM258-202ENST00000535042 SPATA31A5Q5VU36 1347 aa17.86■□□□□ 0.45
TMEM258-202ENST00000535042 SPATA31A7Q8IWB4 1347 aa17.86■□□□□ 0.45
TMEM258-202ENST00000535042 RTL1A6NKG5 1358 aa17.86■□□□□ 0.45
TMEM258-202ENST00000535042 ERBB3P21860 1342 aa17.85■□□□□ 0.45
TMEM258-202ENST00000535042 RXRBP28702 533 aa17.85■□□□□ 0.45
TMEM258-202ENST00000535042 FLT4P35916 1363 aa17.85■□□□□ 0.45
TMEM258-202ENST00000535042 BLMP54132 1417 aaPredicted RBP17.85■□□□□ 0.45
TMEM258-202ENST00000535042 RBM6P78332 1123 aaKnown RBP17.85■□□□□ 0.45
TMEM258-202ENST00000535042 WDR17Q8IZU2 1322 aa17.85■□□□□ 0.45
TMEM258-202ENST00000535042 LTV1Q96GA3 475 aaPredicted RBP17.85■□□□□ 0.45
TMEM258-202ENST00000535042 KIF24Q5T7B8 1368 aa17.84■□□□□ 0.45
TMEM258-202ENST00000535042 SPATA31A1Q5TZJ5 1347 aa17.84■□□□□ 0.45
TMEM258-202ENST00000535042 RGPD5Q99666 1765 aa17.84■□□□□ 0.45
TMEM258-202ENST00000535042 GLI3P10071 1580 aa17.83■□□□□ 0.45
TMEM258-202ENST00000535042 SMG6Q86US8 1419 aaKnown RBP17.83■□□□□ 0.45
TMEM258-202ENST00000535042 INSRP06213 1382 aa17.83■□□□□ 0.45
TMEM258-202ENST00000535042 CSB-PGBD3P0DP91 1061 aa17.83■□□□□ 0.44
TMEM258-202ENST00000535042 TOM1L2Q6ZVM7 507 aa17.83■□□□□ 0.44
TMEM258-202ENST00000535042 USP35Q9P2H5 1018 aa17.83■□□□□ 0.44
TMEM258-202ENST00000535042 CRB1P82279 1406 aa17.82■□□□□ 0.44
TMEM258-202ENST00000535042 MTHFSP49914 203 aa17.82■□□□□ 0.44
TMEM258-202ENST00000535042 PARD3Q8TEW0 1356 aa17.81■□□□□ 0.44
TMEM258-202ENST00000535042 ILDR2Q71H61 639 aa17.81■□□□□ 0.44
TMEM258-202ENST00000535042 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
TMEM258-202ENST00000535042 PPP2R1AP30153 589 aa17.8■□□□□ 0.44
TMEM258-202ENST00000535042 CARD10Q9BWT7 1032 aa17.8■□□□□ 0.44
TMEM258-202ENST00000535042 ONECUT3O60422 494 aaPredicted RBP17.79■□□□□ 0.44
TMEM258-202ENST00000535042 FAM98CQ17RN3 349 aaKnown RBP17.79■□□□□ 0.44
TMEM258-202ENST00000535042 TCP11L2Q8N4U5 519 aa17.79■□□□□ 0.44
TMEM258-202ENST00000535042 NLRP2Q9NX02 1062 aa17.79■□□□□ 0.44
TMEM258-202ENST00000535042 CDK12Q9NYV4 1490 aaPredicted RBP17.78■□□□□ 0.44
TMEM258-202ENST00000535042 EIF4A2Q14240 407 aaKnown RBP17.78■□□□□ 0.44
TMEM258-202ENST00000535042 NBPF6Q5VWK0 638 aa17.78■□□□□ 0.44
TMEM258-202ENST00000535042 NBPF4Q96M43 638 aa17.78■□□□□ 0.44
TMEM258-202ENST00000535042 BARGINQ6ZT62 677 aa17.77■□□□□ 0.44
TMEM258-202ENST00000535042 RGS12O14924 1447 aa17.77■□□□□ 0.44
TMEM258-202ENST00000535042 RALBP1Q15311 655 aa17.76■□□□□ 0.43
TMEM258-202ENST00000535042 THRAP3Q9Y2W1 955 aaKnown RBP17.76■□□□□ 0.43
TMEM258-202ENST00000535042 SEPT12Q8IYM1 358 aa17.75■□□□□ 0.43
TMEM258-202ENST00000535042 USHBP1Q8N6Y0 703 aa17.75■□□□□ 0.43
TMEM258-202ENST00000535042 IL13P35225 146 aa17.74■□□□□ 0.43
TMEM258-202ENST00000535042 EYA1Q99502 592 aa17.74■□□□□ 0.43
TMEM258-202ENST00000535042 PRKRIP1Q9H875 184 aaPredicted RBP17.74■□□□□ 0.43
TMEM258-202ENST00000535042 DISP2A7MBM2 1401 aa17.72■□□□□ 0.43
TMEM258-202ENST00000535042 COL3A1P02461 1466 aaPredicted RBP17.72■□□□□ 0.43
TMEM258-202ENST00000535042 A0A0G2JS52 829 aa17.71■□□□□ 0.43
TMEM258-202ENST00000535042 MYT1Q01538 1121 aa17.71■□□□□ 0.43
TMEM258-202ENST00000535042 RGPD2P0DJD1 1756 aa17.71■□□□□ 0.43
TMEM258-202ENST00000535042 THSD7AQ9UPZ6 1657 aa17.71■□□□□ 0.42
TMEM258-202ENST00000535042 NCAPD2Q15021 1401 aa17.7■□□□□ 0.42
TMEM258-202ENST00000535042 FAM208AQ9UK61 1670 aaKnown RBP17.7■□□□□ 0.42
TMEM258-202ENST00000535042 IGSF1Q8N6C5 1336 aa17.7■□□□□ 0.42
TMEM258-202ENST00000535042 DIAPH1O60610 1272 aaKnown RBP17.69■□□□□ 0.42
TMEM258-202ENST00000535042 IL2RBP14784 551 aa17.69■□□□□ 0.42
TMEM258-202ENST00000535042 MYBBP1AQ9BQG0 1328 aaKnown RBP17.69■□□□□ 0.42
TMEM258-202ENST00000535042 AEBP1Q8IUX7 1158 aa17.67■□□□□ 0.42
TMEM258-202ENST00000535042 CFAP53Q96M91 514 aa17.67■□□□□ 0.42
TMEM258-202ENST00000535042 CDCA7Q9BWT1 371 aaPredicted RBP17.67■□□□□ 0.42
TMEM258-202ENST00000535042 MEGF6O75095 1541 aa17.67■□□□□ 0.42
TMEM258-202ENST00000535042 ANP32CO43423 234 aa17.65■□□□□ 0.42
TMEM258-202ENST00000535042 DDB1Q16531 1140 aa17.65■□□□□ 0.42
TMEM258-202ENST00000535042 FAM182BQ5T319 152 aa17.65■□□□□ 0.42
TMEM258-202ENST00000535042 KRT27Q7Z3Y8 459 aa17.65■□□□□ 0.42
TMEM258-202ENST00000535042 WNK3Q9BYP7 1800 aa17.64■□□□□ 0.41
TMEM258-202ENST00000535042 EXOC5O00471 708 aa17.64■□□□□ 0.41
TMEM258-202ENST00000535042 SULT6B1Q6IMI4 303 aa17.64■□□□□ 0.41
TMEM258-202ENST00000535042 RAPGEF4Q8WZA2 1011 aa17.64■□□□□ 0.41
TMEM258-202ENST00000535042 RGPD1P0DJD0 1748 aa17.64■□□□□ 0.41
TMEM258-202ENST00000535042 LRRC37A3O60309 1634 aa17.63■□□□□ 0.41
TMEM258-202ENST00000535042 U2SURPO15042 1029 aaKnown RBP17.63■□□□□ 0.41
TMEM258-202ENST00000535042 HMOX1P09601 288 aa17.63■□□□□ 0.41
TMEM258-202ENST00000535042 TATP17735 454 aaPredicted RBP17.63■□□□□ 0.41
TMEM258-202ENST00000535042 PDE3BQ13370 1112 aa17.63■□□□□ 0.41
TMEM258-202ENST00000535042 PARP4Q9UKK3 1724 aaKnown RBP17.63■□□□□ 0.41
TMEM258-202ENST00000535042 BRWD3Q6RI45 1802 aa17.63■□□□□ 0.41
TMEM258-202ENST00000535042 OVOS2A0A0G2JMS6 1433 aa17.63■□□□□ 0.41
TMEM258-202ENST00000535042 MARCH10Q8NA82 808 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms