RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 USP54Q70EL1 1684 aa26.61■■□□□ 1.85
NDUFS3-213ENST00000534716 C11orf95C9JLR9 678 aaPredicted RBP26.61■■□□□ 1.85
NDUFS3-213ENST00000534716 HDGFL2Q7Z4V5 671 aaPredicted RBP26.61■■□□□ 1.85
NDUFS3-213ENST00000534716 TMC1Q8TDI8 760 aa26.61■■□□□ 1.85
NDUFS3-213ENST00000534716 EDC4Q6P2E9 1401 aaKnown RBP26.6■■□□□ 1.85
NDUFS3-213ENST00000534716 ST20-MTHFSA0A0A6YYL1 179 aa26.6■■□□□ 1.85
NDUFS3-213ENST00000534716 TRIM37O94972 964 aa26.6■■□□□ 1.85
NDUFS3-213ENST00000534716 TERF2IPQ9NYB0 399 aa26.6■■□□□ 1.85
NDUFS3-213ENST00000534716 NINLQ9Y2I6 1382 aa26.59■■□□□ 1.85
NDUFS3-213ENST00000534716 TOM1L2Q6ZVM7 507 aa26.59■■□□□ 1.85
NDUFS3-213ENST00000534716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.59■■□□□ 1.85
NDUFS3-213ENST00000534716 CAMKK2Q96RR4 588 aa26.58■■□□□ 1.85
NDUFS3-213ENST00000534716 PARD3Q8TEW0 1356 aa26.58■■□□□ 1.84
NDUFS3-213ENST00000534716 A0A1W2PP64 1363 aa26.57■■□□□ 1.84
NDUFS3-213ENST00000534716 SOX12O15370 315 aa26.56■■□□□ 1.84
NDUFS3-213ENST00000534716 NME9Q86XW9 330 aa26.56■■□□□ 1.84
NDUFS3-213ENST00000534716 CDCA7Q9BWT1 371 aaPredicted RBP26.56■■□□□ 1.84
NDUFS3-213ENST00000534716 CARD10Q9BWT7 1032 aa26.56■■□□□ 1.84
NDUFS3-213ENST00000534716 APBA3O96018 575 aa26.55■■□□□ 1.84
NDUFS3-213ENST00000534716 EZH2Q15910 746 aaKnown RBP26.55■■□□□ 1.84
NDUFS3-213ENST00000534716 OVOS2A0A0G2JMS6 1433 aa26.52■■□□□ 1.84
NDUFS3-213ENST00000534716 OVOS2A0A0J9YW53 1432 aa26.52■■□□□ 1.84
NDUFS3-213ENST00000534716 LRRC37A3O60309 1634 aa26.52■■□□□ 1.84
NDUFS3-213ENST00000534716 DDB1Q16531 1140 aa26.52■■□□□ 1.84
NDUFS3-213ENST00000534716 OVOS2Q6IE36 1432 aa26.52■■□□□ 1.84
NDUFS3-213ENST00000534716 TIMELESSQ9UNS1 1208 aa26.52■■□□□ 1.84
NDUFS3-213ENST00000534716 PEAK1Q9H792 1746 aa26.51■■□□□ 1.83
NDUFS3-213ENST00000534716 BCL9O00512 1426 aa26.49■■□□□ 1.83
NDUFS3-213ENST00000534716 CCDC7Q96M83 1385 aa26.49■■□□□ 1.83
NDUFS3-213ENST00000534716 CLSPNQ9HAW4 1339 aa26.49■■□□□ 1.83
NDUFS3-213ENST00000534716 CSB-PGBD3P0DP91 1061 aa26.49■■□□□ 1.83
NDUFS3-213ENST00000534716 PSDA5PKW4 1024 aaPredicted RBP26.48■■□□□ 1.83
NDUFS3-213ENST00000534716 RGPD5Q99666 1765 aa26.48■■□□□ 1.83
NDUFS3-213ENST00000534716 USP47Q96K76 1375 aa26.47■■□□□ 1.83
NDUFS3-213ENST00000534716 LRP5O75197 1615 aa26.47■■□□□ 1.83
NDUFS3-213ENST00000534716 ERBB3P21860 1342 aa26.47■■□□□ 1.83
NDUFS3-213ENST00000534716 WNK3Q9BYP7 1800 aa26.47■■□□□ 1.83
NDUFS3-213ENST00000534716 ANKRD36BQ8N2N9 1353 aa26.45■■□□□ 1.82
NDUFS3-213ENST00000534716 TMF1P82094 1093 aa26.44■■□□□ 1.82
NDUFS3-213ENST00000534716 R3HDM1Q15032 1099 aaKnown RBP26.44■■□□□ 1.82
NDUFS3-213ENST00000534716 MARCH10Q8NA82 808 aaPredicted RBP26.44■■□□□ 1.82
NDUFS3-213ENST00000534716 RREB1Q92766 1687 aa26.44■■□□□ 1.82
NDUFS3-213ENST00000534716 EXOC5O00471 708 aa26.42■■□□□ 1.82
NDUFS3-213ENST00000534716 BCL11BQ9C0K0 894 aaPredicted RBP26.42■■□□□ 1.82
NDUFS3-213ENST00000534716 PLSCR1O15162 318 aa26.41■■□□□ 1.82
NDUFS3-213ENST00000534716 LTN1O94822 1766 aa26.4■■□□□ 1.82
NDUFS3-213ENST00000534716 ANKRD24Q8TF21 1146 aa26.39■■□□□ 1.82
NDUFS3-213ENST00000534716 IP6K1Q92551 441 aa26.39■■□□□ 1.82
NDUFS3-213ENST00000534716 TNS2Q63HR2 1409 aa26.39■■□□□ 1.81
NDUFS3-213ENST00000534716 CDCA8Q53HL2 280 aa26.38■■□□□ 1.81
NDUFS3-213ENST00000534716 COG3Q96JB2 828 aa26.38■■□□□ 1.81
NDUFS3-213ENST00000534716 NUP188Q5SRE5 1749 aa26.37■■□□□ 1.81
NDUFS3-213ENST00000534716 NLRP2Q9NX02 1062 aa26.37■■□□□ 1.81
NDUFS3-213ENST00000534716 RGPD3A6NKT7 1758 aaPredicted RBP26.37■■□□□ 1.81
NDUFS3-213ENST00000534716 RGPD4Q7Z3J3 1758 aa26.37■■□□□ 1.81
NDUFS3-213ENST00000534716 NBPF14Q5TI25 921 aa26.36■■□□□ 1.81
NDUFS3-213ENST00000534716 SBF2Q86WG5 1849 aa26.36■■□□□ 1.81
NDUFS3-213ENST00000534716 IL2RBP14784 551 aa26.34■■□□□ 1.81
NDUFS3-213ENST00000534716 PTF1AQ7RTS3 328 aa26.33■■□□□ 1.81
NDUFS3-213ENST00000534716 FYB1O15117 783 aa26.32■■□□□ 1.8
NDUFS3-213ENST00000534716 PCGF6Q9BYE7 350 aa26.32■■□□□ 1.8
NDUFS3-213ENST00000534716 MAP3K19Q56UN5 1328 aa26.32■■□□□ 1.8
NDUFS3-213ENST00000534716 HOXC9P31274 260 aa26.29■■□□□ 1.8
NDUFS3-213ENST00000534716 PROM2Q8N271 834 aa26.28■■□□□ 1.8
NDUFS3-213ENST00000534716 RTL1A6NKG5 1358 aa26.28■■□□□ 1.8
NDUFS3-213ENST00000534716 FAM208AQ9UK61 1670 aaKnown RBP26.28■■□□□ 1.8
NDUFS3-213ENST00000534716 FBLN1P23142 703 aa26.26■■□□□ 1.79
NDUFS3-213ENST00000534716 AMPHP49418 695 aa26.26■■□□□ 1.79
NDUFS3-213ENST00000534716 GGNBP2Q9H3C7 697 aa26.25■■□□□ 1.79
NDUFS3-213ENST00000534716 KCNQ2O43526 872 aa26.23■■□□□ 1.79
NDUFS3-213ENST00000534716 NHSQ6T4R5 1651 aa26.22■■□□□ 1.79
NDUFS3-213ENST00000534716 LTV1Q96GA3 475 aaPredicted RBP26.22■■□□□ 1.79
NDUFS3-213ENST00000534716 CARD14Q9BXL6 1004 aa26.22■■□□□ 1.79
NDUFS3-213ENST00000534716 MYOM1P52179 1685 aa26.21■■□□□ 1.79
NDUFS3-213ENST00000534716 KIF24Q5T7B8 1368 aa26.2■■□□□ 1.79
NDUFS3-213ENST00000534716 RRS1Q15050 365 aaKnown RBP26.2■■□□□ 1.78
NDUFS3-213ENST00000534716 TXNRD1Q16881 649 aa26.2■■□□□ 1.78
NDUFS3-213ENST00000534716 ANO8Q9HCE9 1232 aaPredicted RBP26.2■■□□□ 1.78
NDUFS3-213ENST00000534716 ACSBG1Q96GR2 724 aa26.17■■□□□ 1.78
NDUFS3-213ENST00000534716 NSD3Q9BZ95 1437 aa26.16■■□□□ 1.78
NDUFS3-213ENST00000534716 INSRP06213 1382 aa26.16■■□□□ 1.78
NDUFS3-213ENST00000534716 SPON1Q9HCB6 807 aa26.15■■□□□ 1.78
NDUFS3-213ENST00000534716 KIF20BQ96Q89 1820 aa26.15■■□□□ 1.78
NDUFS3-213ENST00000534716 NBPF6Q5VWK0 638 aa26.14■■□□□ 1.78
NDUFS3-213ENST00000534716 NBPF4Q96M43 638 aa26.14■■□□□ 1.78
NDUFS3-213ENST00000534716 FLT4P35916 1363 aa26.14■■□□□ 1.78
NDUFS3-213ENST00000534716 SMG6Q86US8 1419 aaKnown RBP26.14■■□□□ 1.77
NDUFS3-213ENST00000534716 CGNL1Q0VF96 1302 aa26.14■■□□□ 1.77
NDUFS3-213ENST00000534716 DDX54Q8TDD1 881 aaKnown RBP26.13■■□□□ 1.77
NDUFS3-213ENST00000534716 ZCRB1Q8TBF4 217 aaKnown RBP26.12■■□□□ 1.77
NDUFS3-213ENST00000534716 CCER1Q8TC90 406 aaPredicted RBP26.12■■□□□ 1.77
NDUFS3-213ENST00000534716 MEGF6O75095 1541 aa26.12■■□□□ 1.77
NDUFS3-213ENST00000534716 EIF4G2P78344 907 aaKnown RBP eCLIP26.11■■□□□ 1.77
NDUFS3-213ENST00000534716 SLC15A2Q16348 729 aa26.11■■□□□ 1.77
NDUFS3-213ENST00000534716 HSP90AB2PQ58FF8 381 aa26.11■■□□□ 1.77
NDUFS3-213ENST00000534716 STK32BQ9NY57 414 aa26.11■■□□□ 1.77
NDUFS3-213ENST00000534716 CASZ1Q86V15 1759 aa26.1■■□□□ 1.77
NDUFS3-213ENST00000534716 BTAF1O14981 1849 aa26.08■■□□□ 1.77
NDUFS3-213ENST00000534716 RGPD2P0DJD1 1756 aa26.07■■□□□ 1.76
NDUFS3-213ENST00000534716 HSPA5P11021 654 aaKnown RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms