RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 SLIT3O75094 1523 aa16.59■□□□□ 0.25
CTNND1-238ENST00000534647 PARP4Q9UKK3 1724 aaKnown RBP16.57■□□□□ 0.24
CTNND1-238ENST00000534647 PLSCR1O15162 318 aa16.57■□□□□ 0.24
CTNND1-238ENST00000534647 TPRNQ4KMQ1 711 aa16.56■□□□□ 0.24
CTNND1-238ENST00000534647 KCNH5Q8NCM2 988 aa16.56■□□□□ 0.24
CTNND1-238ENST00000534647 CDCA7Q9BWT1 371 aaPredicted RBP16.56■□□□□ 0.24
CTNND1-238ENST00000534647 RREB1Q92766 1687 aa16.56■□□□□ 0.24
CTNND1-238ENST00000534647 QRICH2Q9H0J4 1663 aa16.56■□□□□ 0.24
CTNND1-238ENST00000534647 OVOS2A0A0G2JMS6 1433 aa16.55■□□□□ 0.24
CTNND1-238ENST00000534647 OVOS2A0A0J9YW53 1432 aa16.55■□□□□ 0.24
CTNND1-238ENST00000534647 BCL9O00512 1426 aa16.55■□□□□ 0.24
CTNND1-238ENST00000534647 OVOS2Q6IE36 1432 aa16.55■□□□□ 0.24
CTNND1-238ENST00000534647 WDR17Q8IZU2 1322 aa16.55■□□□□ 0.24
CTNND1-238ENST00000534647 ARHGEF25Q86VW2 580 aa16.55■□□□□ 0.24
CTNND1-238ENST00000534647 AXIN2Q9Y2T1 843 aa16.55■□□□□ 0.24
CTNND1-238ENST00000534647 TTC21BQ7Z4L5 1316 aa16.54■□□□□ 0.24
CTNND1-238ENST00000534647 TTC21AQ8NDW8 1320 aa16.54■□□□□ 0.24
CTNND1-238ENST00000534647 DDB1Q16531 1140 aa16.54■□□□□ 0.24
CTNND1-238ENST00000534647 TOM1L2Q6ZVM7 507 aa16.54■□□□□ 0.24
CTNND1-238ENST00000534647 BCL11BQ9C0K0 894 aaPredicted RBP16.53■□□□□ 0.24
CTNND1-238ENST00000534647 COL18A1P39060 1754 aa16.53■□□□□ 0.24
CTNND1-238ENST00000534647 PEAK1Q9H792 1746 aa16.53■□□□□ 0.24
CTNND1-238ENST00000534647 CPSF1Q10570 1443 aaKnown RBP16.53■□□□□ 0.24
CTNND1-238ENST00000534647 SIN3AQ96ST3 1273 aa16.52■□□□□ 0.24
CTNND1-238ENST00000534647 CARD10Q9BWT7 1032 aa16.52■□□□□ 0.24
CTNND1-238ENST00000534647 NUP188Q5SRE5 1749 aa16.52■□□□□ 0.24
CTNND1-238ENST00000534647 PIK3C2AO00443 1686 aa16.51■□□□□ 0.23
CTNND1-238ENST00000534647 SPON1Q9HCB6 807 aa16.51■□□□□ 0.23
CTNND1-238ENST00000534647 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
CTNND1-238ENST00000534647 ROCK2O75116 1388 aaKnown RBP16.51■□□□□ 0.23
CTNND1-238ENST00000534647 ZBTB7CA1YPR0 619 aa16.5■□□□□ 0.23
CTNND1-238ENST00000534647 KCNQ2O43526 872 aa16.5■□□□□ 0.23
CTNND1-238ENST00000534647 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
CTNND1-238ENST00000534647 MARCH10Q8NA82 808 aaPredicted RBP16.5■□□□□ 0.23
CTNND1-238ENST00000534647 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
CTNND1-238ENST00000534647 RGPD3A6NKT7 1758 aaPredicted RBP16.49■□□□□ 0.23
CTNND1-238ENST00000534647 RGPD4Q7Z3J3 1758 aa16.49■□□□□ 0.23
CTNND1-238ENST00000534647 LRRC37A3O60309 1634 aa16.48■□□□□ 0.23
CTNND1-238ENST00000534647 ABCC6O95255 1503 aa16.47■□□□□ 0.23
CTNND1-238ENST00000534647 PROM2Q8N271 834 aa16.47■□□□□ 0.23
CTNND1-238ENST00000534647 USP31Q70CQ4 1352 aa16.47■□□□□ 0.23
CTNND1-238ENST00000534647 KTN1Q86UP2 1357 aaKnown RBP16.47■□□□□ 0.23
CTNND1-238ENST00000534647 EXOC5O00471 708 aa16.46■□□□□ 0.23
CTNND1-238ENST00000534647 PTF1AQ7RTS3 328 aa16.46■□□□□ 0.23
CTNND1-238ENST00000534647 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
CTNND1-238ENST00000534647 NFAT5O94916 1531 aa16.45■□□□□ 0.22
CTNND1-238ENST00000534647 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
CTNND1-238ENST00000534647 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
CTNND1-238ENST00000534647 AKAP12Q02952 1782 aa16.45■□□□□ 0.22
CTNND1-238ENST00000534647 SBF2Q86WG5 1849 aa16.45■□□□□ 0.22
CTNND1-238ENST00000534647 NINLQ9Y2I6 1382 aa16.43■□□□□ 0.22
CTNND1-238ENST00000534647 PUS7Q96PZ0 661 aaKnown RBP16.43■□□□□ 0.22
CTNND1-238ENST00000534647 ANO8Q9HCE9 1232 aaPredicted RBP16.43■□□□□ 0.22
CTNND1-238ENST00000534647 PPP1R1BQ9UD71 204 aaPredicted RBP16.43■□□□□ 0.22
CTNND1-238ENST00000534647 FBXO3Q9UK99 471 aa16.42■□□□□ 0.22
CTNND1-238ENST00000534647 WNK3Q9BYP7 1800 aa16.41■□□□□ 0.22
CTNND1-238ENST00000534647 SOX12O15370 315 aa16.41■□□□□ 0.22
CTNND1-238ENST00000534647 TXNRD1Q16881 649 aa16.41■□□□□ 0.22
CTNND1-238ENST00000534647 CD163L1Q9NR16 1453 aa16.4■□□□□ 0.22
CTNND1-238ENST00000534647 ERBB3P21860 1342 aa16.4■□□□□ 0.22
CTNND1-238ENST00000534647 DCAF8L1A6NGE4 600 aa16.39■□□□□ 0.21
CTNND1-238ENST00000534647 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.39■□□□□ 0.21
CTNND1-238ENST00000534647 CARD11Q9BXL7 1154 aa16.39■□□□□ 0.21
CTNND1-238ENST00000534647 USP54Q70EL1 1684 aa16.39■□□□□ 0.21
CTNND1-238ENST00000534647 TNS2Q63HR2 1409 aa16.38■□□□□ 0.21
CTNND1-238ENST00000534647 YY1P25490 414 aa16.38■□□□□ 0.21
CTNND1-238ENST00000534647 HDGFL2Q7Z4V5 671 aaPredicted RBP16.38■□□□□ 0.21
CTNND1-238ENST00000534647 NME9Q86XW9 330 aa16.38■□□□□ 0.21
CTNND1-238ENST00000534647 MON2Q7Z3U7 1717 aa16.38■□□□□ 0.21
CTNND1-238ENST00000534647 RGPD5Q99666 1765 aa16.38■□□□□ 0.21
CTNND1-238ENST00000534647 CASZ1Q86V15 1759 aa16.37■□□□□ 0.21
CTNND1-238ENST00000534647 SLC15A2Q16348 729 aa16.37■□□□□ 0.21
CTNND1-238ENST00000534647 PDGFDQ9GZP0 370 aaPredicted RBP16.37■□□□□ 0.21
CTNND1-238ENST00000534647 SLC12A5Q9H2X9 1139 aa16.37■□□□□ 0.21
CTNND1-238ENST00000534647 STK32BQ9NY57 414 aa16.37■□□□□ 0.21
CTNND1-238ENST00000534647 TERF2IPQ9NYB0 399 aa16.37■□□□□ 0.21
CTNND1-238ENST00000534647 EDC4Q6P2E9 1401 aaKnown RBP16.36■□□□□ 0.21
CTNND1-238ENST00000534647 IL2RBP14784 551 aa16.36■□□□□ 0.21
CTNND1-238ENST00000534647 PTGER2P43116 358 aa16.36■□□□□ 0.21
CTNND1-238ENST00000534647 TRIM26Q12899 539 aaPredicted RBP16.36■□□□□ 0.21
CTNND1-238ENST00000534647 NLRP2Q9NX02 1062 aa16.36■□□□□ 0.21
CTNND1-238ENST00000534647 DAXXQ9UER7 740 aaPredicted RBP16.36■□□□□ 0.21
CTNND1-238ENST00000534647 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
CTNND1-238ENST00000534647 ANKRD24Q8TF21 1146 aa16.34■□□□□ 0.21
CTNND1-238ENST00000534647 MSH5O43196 834 aa16.33■□□□□ 0.2
CTNND1-238ENST00000534647 ZBTB7AO95365 584 aa16.33■□□□□ 0.2
CTNND1-238ENST00000534647 IP6K1Q92551 441 aa16.33■□□□□ 0.2
CTNND1-238ENST00000534647 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
CTNND1-238ENST00000534647 PCGF6Q9BYE7 350 aa16.32■□□□□ 0.2
CTNND1-238ENST00000534647 MTFR1LQ9H019 292 aa16.32■□□□□ 0.2
CTNND1-238ENST00000534647 NHSQ6T4R5 1651 aa16.31■□□□□ 0.2
CTNND1-238ENST00000534647 A0A1W2PP64 1363 aa16.31■□□□□ 0.2
CTNND1-238ENST00000534647 ATF5Q9Y2D1 282 aaPredicted RBP16.31■□□□□ 0.2
CTNND1-238ENST00000534647 ACSBG1Q96GR2 724 aa16.3■□□□□ 0.2
CTNND1-238ENST00000534647 TESK2Q96S53 571 aa16.3■□□□□ 0.2
CTNND1-238ENST00000534647 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
CTNND1-238ENST00000534647 SYT17Q9BSW7 474 aa16.29■□□□□ 0.2
CTNND1-238ENST00000534647 SLC27A3Q5K4L6 730 aa16.27■□□□□ 0.2
CTNND1-238ENST00000534647 LTN1O94822 1766 aa16.27■□□□□ 0.2
CTNND1-238ENST00000534647 COG3Q96JB2 828 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms