RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 USP54Q70EL1 1684 aa30.28■■■□□ 2.44
GSDMD-216ENST00000534602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.28■■■□□ 2.44
GSDMD-216ENST00000534602 SRCAPQ6ZRS2 3230 aa30.28■■■□□ 2.44
GSDMD-216ENST00000534602 PARP4Q9UKK3 1724 aaKnown RBP30.27■■■□□ 2.44
GSDMD-216ENST00000534602 TOM1L2Q6ZVM7 507 aa30.27■■■□□ 2.44
GSDMD-216ENST00000534602 EDC4Q6P2E9 1401 aaKnown RBP30.27■■■□□ 2.44
GSDMD-216ENST00000534602 ABCC6O95255 1503 aa30.27■■■□□ 2.44
GSDMD-216ENST00000534602 TIMELESSQ9UNS1 1208 aa30.26■■■□□ 2.43
GSDMD-216ENST00000534602 TNS1Q9HBL0 1735 aaKnown RBP30.25■■■□□ 2.43
GSDMD-216ENST00000534602 C11orf95C9JLR9 678 aaPredicted RBP30.25■■■□□ 2.43
GSDMD-216ENST00000534602 SOX12O15370 315 aa30.25■■■□□ 2.43
GSDMD-216ENST00000534602 CLSPNQ9HAW4 1339 aa30.24■■■□□ 2.43
GSDMD-216ENST00000534602 EN1Q05925 392 aaPredicted RBP30.24■■■□□ 2.43
GSDMD-216ENST00000534602 NME9Q86XW9 330 aa30.24■■■□□ 2.43
GSDMD-216ENST00000534602 A0A1W2PP64 1363 aa30.24■■■□□ 2.43
GSDMD-216ENST00000534602 TRIM37O94972 964 aa30.23■■■□□ 2.43
GSDMD-216ENST00000534602 CDCA7Q9BWT1 371 aaPredicted RBP30.22■■■□□ 2.43
GSDMD-216ENST00000534602 CARD10Q9BWT7 1032 aa30.2■■■□□ 2.43
GSDMD-216ENST00000534602 PARD3Q8TEW0 1356 aa30.18■■■□□ 2.42
GSDMD-216ENST00000534602 USP47Q96K76 1375 aa30.18■■■□□ 2.42
GSDMD-216ENST00000534602 RGPD5Q99666 1765 aa30.18■■■□□ 2.42
GSDMD-216ENST00000534602 CSB-PGBD3P0DP91 1061 aa30.17■■■□□ 2.42
GSDMD-216ENST00000534602 DDB1Q16531 1140 aa30.17■■■□□ 2.42
GSDMD-216ENST00000534602 CAMKK2Q96RR4 588 aa30.17■■■□□ 2.42
GSDMD-216ENST00000534602 APBA3O96018 575 aa30.16■■■□□ 2.42
GSDMD-216ENST00000534602 TMF1P82094 1093 aa30.15■■■□□ 2.42
GSDMD-216ENST00000534602 LRRC37A3O60309 1634 aa30.14■■■□□ 2.42
GSDMD-216ENST00000534602 OVOS2A0A0G2JMS6 1433 aa30.14■■■□□ 2.42
GSDMD-216ENST00000534602 OVOS2A0A0J9YW53 1432 aa30.14■■■□□ 2.42
GSDMD-216ENST00000534602 OVOS2Q6IE36 1432 aa30.14■■■□□ 2.42
GSDMD-216ENST00000534602 EZH2Q15910 746 aaKnown RBP30.14■■■□□ 2.42
GSDMD-216ENST00000534602 CCDC7Q96M83 1385 aa30.14■■■□□ 2.41
GSDMD-216ENST00000534602 WNK3Q9BYP7 1800 aa30.13■■■□□ 2.41
GSDMD-216ENST00000534602 PEAK1Q9H792 1746 aa30.11■■■□□ 2.41
GSDMD-216ENST00000534602 PCGF6Q9BYE7 350 aa30.11■■■□□ 2.41
GSDMD-216ENST00000534602 ANKRD36BQ8N2N9 1353 aa30.11■■■□□ 2.41
GSDMD-216ENST00000534602 CDCA8Q53HL2 280 aa30.1■■■□□ 2.41
GSDMD-216ENST00000534602 ERBB3P21860 1342 aa30.1■■■□□ 2.41
GSDMD-216ENST00000534602 LTN1O94822 1766 aa30.1■■■□□ 2.41
GSDMD-216ENST00000534602 BCL9O00512 1426 aa30.08■■■□□ 2.41
GSDMD-216ENST00000534602 PSDA5PKW4 1024 aaPredicted RBP30.06■■■□□ 2.4
GSDMD-216ENST00000534602 COG3Q96JB2 828 aa30.06■■■□□ 2.4
GSDMD-216ENST00000534602 MARCH10Q8NA82 808 aaPredicted RBP30.05■■■□□ 2.4
GSDMD-216ENST00000534602 EXOC5O00471 708 aa30.04■■■□□ 2.4
GSDMD-216ENST00000534602 IP6K1Q92551 441 aa30.03■■■□□ 2.4
GSDMD-216ENST00000534602 NLRP2Q9NX02 1062 aa30.03■■■□□ 2.4
GSDMD-216ENST00000534602 RREB1Q92766 1687 aa30.02■■■□□ 2.4
GSDMD-216ENST00000534602 SBF2Q86WG5 1849 aa30.02■■■□□ 2.4
GSDMD-216ENST00000534602 ANKRD24Q8TF21 1146 aa30.02■■■□□ 2.4
GSDMD-216ENST00000534602 LRP5O75197 1615 aa30.02■■■□□ 2.4
GSDMD-216ENST00000534602 R3HDM1Q15032 1099 aaKnown RBP30.01■■■□□ 2.39
GSDMD-216ENST00000534602 BCL11BQ9C0K0 894 aaPredicted RBP30.01■■■□□ 2.39
GSDMD-216ENST00000534602 PLSCR1O15162 318 aa30■■■□□ 2.39
GSDMD-216ENST00000534602 TNS2Q63HR2 1409 aa29.99■■■□□ 2.39
GSDMD-216ENST00000534602 IL2RBP14784 551 aa29.97■■■□□ 2.39
GSDMD-216ENST00000534602 NBPF14Q5TI25 921 aa29.97■■■□□ 2.39
GSDMD-216ENST00000534602 RGPD3A6NKT7 1758 aaPredicted RBP29.97■■■□□ 2.39
GSDMD-216ENST00000534602 RGPD4Q7Z3J3 1758 aa29.97■■■□□ 2.39
GSDMD-216ENST00000534602 FYB1O15117 783 aa29.96■■■□□ 2.39
GSDMD-216ENST00000534602 NUP188Q5SRE5 1749 aa29.96■■■□□ 2.39
GSDMD-216ENST00000534602 MAP3K19Q56UN5 1328 aa29.96■■■□□ 2.39
GSDMD-216ENST00000534602 FAM208AQ9UK61 1670 aaKnown RBP29.93■■■□□ 2.38
GSDMD-216ENST00000534602 HOXC9P31274 260 aa29.92■■■□□ 2.38
GSDMD-216ENST00000534602 AMPHP49418 695 aa29.91■■■□□ 2.38
GSDMD-216ENST00000534602 RTL1A6NKG5 1358 aa29.9■■■□□ 2.38
GSDMD-216ENST00000534602 PTF1AQ7RTS3 328 aa29.9■■■□□ 2.38
GSDMD-216ENST00000534602 GGNBP2Q9H3C7 697 aa29.9■■■□□ 2.38
GSDMD-216ENST00000534602 CCER1Q8TC90 406 aaPredicted RBP29.88■■■□□ 2.37
GSDMD-216ENST00000534602 FBLN1P23142 703 aa29.87■■■□□ 2.37
GSDMD-216ENST00000534602 LTV1Q96GA3 475 aaPredicted RBP29.87■■■□□ 2.37
GSDMD-216ENST00000534602 MYOM1P52179 1685 aa29.86■■■□□ 2.37
GSDMD-216ENST00000534602 CARD14Q9BXL6 1004 aa29.85■■■□□ 2.37
GSDMD-216ENST00000534602 KIF20BQ96Q89 1820 aa29.84■■■□□ 2.37
GSDMD-216ENST00000534602 RRS1Q15050 365 aaKnown RBP29.83■■■□□ 2.37
GSDMD-216ENST00000534602 KIF24Q5T7B8 1368 aa29.82■■■□□ 2.36
GSDMD-216ENST00000534602 PROM2Q8N271 834 aa29.82■■■□□ 2.36
GSDMD-216ENST00000534602 NHSQ6T4R5 1651 aa29.82■■■□□ 2.36
GSDMD-216ENST00000534602 KCNQ2O43526 872 aa29.81■■■□□ 2.36
GSDMD-216ENST00000534602 NSD3Q9BZ95 1437 aa29.8■■■□□ 2.36
GSDMD-216ENST00000534602 EIF4G2P78344 907 aaKnown RBP eCLIP29.8■■■□□ 2.36
GSDMD-216ENST00000534602 TXNRD1Q16881 649 aa29.78■■■□□ 2.36
GSDMD-216ENST00000534602 SMG6Q86US8 1419 aaKnown RBP29.77■■■□□ 2.36
GSDMD-216ENST00000534602 INSRP06213 1382 aa29.77■■■□□ 2.36
GSDMD-216ENST00000534602 ACSBG1Q96GR2 724 aa29.76■■■□□ 2.35
GSDMD-216ENST00000534602 FLT4P35916 1363 aa29.76■■■□□ 2.35
GSDMD-216ENST00000534602 NBPF6Q5VWK0 638 aa29.74■■■□□ 2.35
GSDMD-216ENST00000534602 DDX54Q8TDD1 881 aaKnown RBP29.74■■■□□ 2.35
GSDMD-216ENST00000534602 NBPF4Q96M43 638 aa29.74■■■□□ 2.35
GSDMD-216ENST00000534602 CGNL1Q0VF96 1302 aa29.73■■■□□ 2.35
GSDMD-216ENST00000534602 RGPD2P0DJD1 1756 aa29.73■■■□□ 2.35
GSDMD-216ENST00000534602 ANO8Q9HCE9 1232 aaPredicted RBP29.73■■■□□ 2.35
GSDMD-216ENST00000534602 HSPA5P11021 654 aaKnown RBP29.72■■■□□ 2.35
GSDMD-216ENST00000534602 HSP90AB2PQ58FF8 381 aa29.72■■■□□ 2.35
GSDMD-216ENST00000534602 ZCRB1Q8TBF4 217 aaKnown RBP29.72■■■□□ 2.35
GSDMD-216ENST00000534602 SPON1Q9HCB6 807 aa29.7■■■□□ 2.35
GSDMD-216ENST00000534602 MEGF6O75095 1541 aa29.7■■■□□ 2.34
GSDMD-216ENST00000534602 BTAF1O14981 1849 aa29.68■■■□□ 2.34
GSDMD-216ENST00000534602 STK32BQ9NY57 414 aa29.68■■■□□ 2.34
GSDMD-216ENST00000534602 KAT6BQ8WYB5 2073 aa29.67■■■□□ 2.34
GSDMD-216ENST00000534602 RAPGEF4Q8WZA2 1011 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms