RNA–Protein interactions for RNA: ENST00000534466.1

PDE4DIP-235, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 4

Gene PDE4DIP, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-235ENST00000534466 GJD4Q96KN9 370 aaPredicted RBP18.03■□□□□ 0.48
PDE4DIP-235ENST00000534466 AXIN2Q9Y2T1 843 aa18.03■□□□□ 0.48
PDE4DIP-235ENST00000534466 GLI3P10071 1580 aa18.02■□□□□ 0.48
PDE4DIP-235ENST00000534466 RRS1Q15050 365 aaKnown RBP18.02■□□□□ 0.48
PDE4DIP-235ENST00000534466 VPS72Q15906 364 aa18.02■□□□□ 0.48
PDE4DIP-235ENST00000534466 CNGB1Q14028 1251 aaPredicted RBP18.01■□□□□ 0.47
PDE4DIP-235ENST00000534466 COL5A2P05997 1499 aaPredicted RBP18.01■□□□□ 0.47
PDE4DIP-235ENST00000534466 MAP2P11137 1827 aaKnown RBP18■□□□□ 0.47
PDE4DIP-235ENST00000534466 TNNT2P45379 298 aaPredicted RBP18■□□□□ 0.47
PDE4DIP-235ENST00000534466 LARP1Q6PKG0 1096 aaKnown RBP18■□□□□ 0.47
PDE4DIP-235ENST00000534466 MAP3K19Q56UN5 1328 aa17.99■□□□□ 0.47
PDE4DIP-235ENST00000534466 PER1O15534 1290 aaPredicted RBP17.99■□□□□ 0.47
PDE4DIP-235ENST00000534466 USP35Q9P2H5 1018 aa17.99■□□□□ 0.47
PDE4DIP-235ENST00000534466 AMPHP49418 695 aa17.98■□□□□ 0.47
PDE4DIP-235ENST00000534466 AMER1Q5JTC6 1135 aaPredicted RBP17.98■□□□□ 0.47
PDE4DIP-235ENST00000534466 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
PDE4DIP-235ENST00000534466 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
PDE4DIP-235ENST00000534466 NSD2O96028 1365 aa17.97■□□□□ 0.47
PDE4DIP-235ENST00000534466 CSB-PGBD3P0DP91 1061 aa17.97■□□□□ 0.47
PDE4DIP-235ENST00000534466 CC2D1BQ5T0F9 858 aaKnown RBP17.97■□□□□ 0.47
PDE4DIP-235ENST00000534466 ABCC6O95255 1503 aa17.97■□□□□ 0.47
PDE4DIP-235ENST00000534466 RGS12O14924 1447 aa17.97■□□□□ 0.47
PDE4DIP-235ENST00000534466 PEAK1Q9H792 1746 aa17.96■□□□□ 0.47
PDE4DIP-235ENST00000534466 MORC1Q86VD1 984 aa17.96■□□□□ 0.47
PDE4DIP-235ENST00000534466 IP6K1Q92551 441 aa17.96■□□□□ 0.47
PDE4DIP-235ENST00000534466 PPM1GO15355 546 aaPredicted RBP17.95■□□□□ 0.46
PDE4DIP-235ENST00000534466 HOXC9P31274 260 aa17.95■□□□□ 0.46
PDE4DIP-235ENST00000534466 FAM98CQ17RN3 349 aaKnown RBP17.95■□□□□ 0.46
PDE4DIP-235ENST00000534466 TOM1L2Q6ZVM7 507 aa17.95■□□□□ 0.46
PDE4DIP-235ENST00000534466 LTV1Q96GA3 475 aaPredicted RBP17.95■□□□□ 0.46
PDE4DIP-235ENST00000534466 EMILIN1Q9Y6C2 1016 aa17.95■□□□□ 0.46
PDE4DIP-235ENST00000534466 SPATA31A1Q5TZJ5 1347 aa17.95■□□□□ 0.46
PDE4DIP-235ENST00000534466 CDK12Q9NYV4 1490 aaPredicted RBP17.95■□□□□ 0.46
PDE4DIP-235ENST00000534466 A0A0G2JS52 829 aa17.94■□□□□ 0.46
PDE4DIP-235ENST00000534466 MYT1Q01538 1121 aa17.94■□□□□ 0.46
PDE4DIP-235ENST00000534466 ANKRD24Q8TF21 1146 aa17.94■□□□□ 0.46
PDE4DIP-235ENST00000534466 WDR17Q8IZU2 1322 aa17.94■□□□□ 0.46
PDE4DIP-235ENST00000534466 BRWD3Q6RI45 1802 aa17.93■□□□□ 0.46
PDE4DIP-235ENST00000534466 CRB1P82279 1406 aa17.93■□□□□ 0.46
PDE4DIP-235ENST00000534466 DDX10Q13206 875 aaKnown RBP17.93■□□□□ 0.46
PDE4DIP-235ENST00000534466 RGPD2P0DJD1 1756 aa17.92■□□□□ 0.46
PDE4DIP-235ENST00000534466 BLMP54132 1417 aaPredicted RBP17.92■□□□□ 0.46
PDE4DIP-235ENST00000534466 ERBB3P21860 1342 aa17.92■□□□□ 0.46
PDE4DIP-235ENST00000534466 RTL1A6NKG5 1358 aa17.91■□□□□ 0.46
PDE4DIP-235ENST00000534466 SEPT12Q8IYM1 358 aa17.91■□□□□ 0.46
PDE4DIP-235ENST00000534466 POLKQ9UBT6 870 aa17.91■□□□□ 0.46
PDE4DIP-235ENST00000534466 HSP90AB2PQ58FF8 381 aa17.9■□□□□ 0.46
PDE4DIP-235ENST00000534466 TCP11L2Q8N4U5 519 aa17.9■□□□□ 0.46
PDE4DIP-235ENST00000534466 NLRP2Q9NX02 1062 aa17.9■□□□□ 0.46
PDE4DIP-235ENST00000534466 FLT4P35916 1363 aa17.9■□□□□ 0.46
PDE4DIP-235ENST00000534466 WNK3Q9BYP7 1800 aa17.88■□□□□ 0.45
PDE4DIP-235ENST00000534466 ZNF316A6NFI3 1004 aaPredicted RBP17.88■□□□□ 0.45
PDE4DIP-235ENST00000534466 ONECUT3O60422 494 aaPredicted RBP17.88■□□□□ 0.45
PDE4DIP-235ENST00000534466 CARD10Q9BWT7 1032 aa17.88■□□□□ 0.45
PDE4DIP-235ENST00000534466 NPC1L1Q9UHC9 1359 aa17.88■□□□□ 0.45
PDE4DIP-235ENST00000534466 FAM208AQ9UK61 1670 aaKnown RBP17.87■□□□□ 0.45
PDE4DIP-235ENST00000534466 THSD7AQ9UPZ6 1657 aa17.87■□□□□ 0.45
PDE4DIP-235ENST00000534466 THRAP3Q9Y2W1 955 aaKnown RBP17.87■□□□□ 0.45
PDE4DIP-235ENST00000534466 INSRP06213 1382 aa17.87■□□□□ 0.45
PDE4DIP-235ENST00000534466 KIF24Q5T7B8 1368 aa17.87■□□□□ 0.45
PDE4DIP-235ENST00000534466 BARGINQ6ZT62 677 aa17.86■□□□□ 0.45
PDE4DIP-235ENST00000534466 SMG6Q86US8 1419 aaKnown RBP17.85■□□□□ 0.45
PDE4DIP-235ENST00000534466 KRT27Q7Z3Y8 459 aa17.83■□□□□ 0.44
PDE4DIP-235ENST00000534466 USHBP1Q8N6Y0 703 aa17.83■□□□□ 0.44
PDE4DIP-235ENST00000534466 PARP4Q9UKK3 1724 aaKnown RBP17.83■□□□□ 0.44
PDE4DIP-235ENST00000534466 MTHFSP49914 203 aa17.82■□□□□ 0.44
PDE4DIP-235ENST00000534466 NBPF6Q5VWK0 638 aa17.82■□□□□ 0.44
PDE4DIP-235ENST00000534466 NBPF4Q96M43 638 aa17.82■□□□□ 0.44
PDE4DIP-235ENST00000534466 FAM182BQ5T319 152 aa17.81■□□□□ 0.44
PDE4DIP-235ENST00000534466 LRRC37A3O60309 1634 aa17.8■□□□□ 0.44
PDE4DIP-235ENST00000534466 SOCS7O14512 581 aa17.8■□□□□ 0.44
PDE4DIP-235ENST00000534466 EIF4A2Q14240 407 aaKnown RBP17.8■□□□□ 0.44
PDE4DIP-235ENST00000534466 DISP2A7MBM2 1401 aa17.8■□□□□ 0.44
PDE4DIP-235ENST00000534466 IL2RBP14784 551 aa17.79■□□□□ 0.44
PDE4DIP-235ENST00000534466 PDE3BQ13370 1112 aa17.78■□□□□ 0.44
PDE4DIP-235ENST00000534466 DDB1Q16531 1140 aa17.78■□□□□ 0.44
PDE4DIP-235ENST00000534466 CDCA7Q9BWT1 371 aaPredicted RBP17.78■□□□□ 0.44
PDE4DIP-235ENST00000534466 EYA1Q99502 592 aa17.77■□□□□ 0.44
PDE4DIP-235ENST00000534466 EXOC5O00471 708 aa17.76■□□□□ 0.43
PDE4DIP-235ENST00000534466 PPP2R1AP30153 589 aa17.76■□□□□ 0.43
PDE4DIP-235ENST00000534466 EP400Q96L91 3159 aa17.75■□□□□ 0.43
PDE4DIP-235ENST00000534466 MEGF6O75095 1541 aa17.75■□□□□ 0.43
PDE4DIP-235ENST00000534466 UPF1Q92900 1129 aaKnown RBP eCLIP17.74■□□□□ 0.43
PDE4DIP-235ENST00000534466 PARD3Q8TEW0 1356 aa17.74■□□□□ 0.43
PDE4DIP-235ENST00000534466 TNS2Q63HR2 1409 aa17.73■□□□□ 0.43
PDE4DIP-235ENST00000534466 IL13P35225 146 aa17.73■□□□□ 0.43
PDE4DIP-235ENST00000534466 RAPGEF4Q8WZA2 1011 aa17.73■□□□□ 0.43
PDE4DIP-235ENST00000534466 KAT6BQ8WYB5 2073 aa17.72■□□□□ 0.43
PDE4DIP-235ENST00000534466 TATP17735 454 aaPredicted RBP17.72■□□□□ 0.43
PDE4DIP-235ENST00000534466 IGSF1Q8N6C5 1336 aa17.72■□□□□ 0.43
PDE4DIP-235ENST00000534466 DIAPH1O60610 1272 aaKnown RBP17.71■□□□□ 0.43
PDE4DIP-235ENST00000534466 MARCH10Q8NA82 808 aaPredicted RBP17.71■□□□□ 0.43
PDE4DIP-235ENST00000534466 RGPD1P0DJD0 1748 aa17.71■□□□□ 0.43
PDE4DIP-235ENST00000534466 SHANK3Q9BYB0 1731 aa17.71■□□□□ 0.43
PDE4DIP-235ENST00000534466 NCAPD2Q15021 1401 aa17.71■□□□□ 0.43
PDE4DIP-235ENST00000534466 COL3A1P02461 1466 aaPredicted RBP17.7■□□□□ 0.42
PDE4DIP-235ENST00000534466 OVOS2A0A0G2JMS6 1433 aa17.7■□□□□ 0.42
PDE4DIP-235ENST00000534466 RALBP1Q15311 655 aa17.69■□□□□ 0.42
PDE4DIP-235ENST00000534466 FAM196AQ6ZSG2 479 aa17.69■□□□□ 0.42
PDE4DIP-235ENST00000534466 AEBP1Q8IUX7 1158 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms