RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 TMC1Q8TDI8 760 aa22.9■■□□□ 1.26
CCDC180-213ENST00000534189 CPSF1Q10570 1443 aaKnown RBP22.9■■□□□ 1.26
CCDC180-213ENST00000534189 KTN1Q86UP2 1357 aaKnown RBP22.89■■□□□ 1.26
CCDC180-213ENST00000534189 PTGER2P43116 358 aa22.89■■□□□ 1.25
CCDC180-213ENST00000534189 USP35Q9P2H5 1018 aa22.89■■□□□ 1.25
CCDC180-213ENST00000534189 PLSCR1O15162 318 aa22.88■■□□□ 1.25
CCDC180-213ENST00000534189 HDGFL2Q7Z4V5 671 aaPredicted RBP22.88■■□□□ 1.25
CCDC180-213ENST00000534189 ANO8Q9HCE9 1232 aaPredicted RBP22.88■■□□□ 1.25
CCDC180-213ENST00000534189 PDGFDQ9GZP0 370 aaPredicted RBP22.87■■□□□ 1.25
CCDC180-213ENST00000534189 AKAP12Q02952 1782 aa22.86■■□□□ 1.25
CCDC180-213ENST00000534189 TESK2Q96S53 571 aa22.86■■□□□ 1.25
CCDC180-213ENST00000534189 RGPD3A6NKT7 1758 aaPredicted RBP22.86■■□□□ 1.25
CCDC180-213ENST00000534189 RGPD4Q7Z3J3 1758 aa22.86■■□□□ 1.25
CCDC180-213ENST00000534189 MYOM1P52179 1685 aa22.85■■□□□ 1.25
CCDC180-213ENST00000534189 ZBTB7CA1YPR0 619 aa22.85■■□□□ 1.25
CCDC180-213ENST00000534189 C11orf95C9JLR9 678 aaPredicted RBP22.85■■□□□ 1.25
CCDC180-213ENST00000534189 KCNH5Q8NCM2 988 aa22.85■■□□□ 1.25
CCDC180-213ENST00000534189 SYT17Q9BSW7 474 aa22.85■■□□□ 1.25
CCDC180-213ENST00000534189 SLC12A5Q9H2X9 1139 aa22.85■■□□□ 1.25
CCDC180-213ENST00000534189 TERF2IPQ9NYB0 399 aa22.85■■□□□ 1.25
CCDC180-213ENST00000534189 TCP11L2Q8N4U5 519 aa22.84■■□□□ 1.25
CCDC180-213ENST00000534189 SLIT3O75094 1523 aa22.83■■□□□ 1.25
CCDC180-213ENST00000534189 CHD4Q14839 1912 aa22.83■■□□□ 1.25
CCDC180-213ENST00000534189 PIK3C2AO00443 1686 aa22.82■■□□□ 1.24
CCDC180-213ENST00000534189 ZBTB7AO95365 584 aa22.82■■□□□ 1.24
CCDC180-213ENST00000534189 LARP1Q6PKG0 1096 aaKnown RBP22.82■■□□□ 1.24
CCDC180-213ENST00000534189 CCER1Q8TC90 406 aaPredicted RBP22.82■■□□□ 1.24
CCDC180-213ENST00000534189 THRAP3Q9Y2W1 955 aaKnown RBP22.82■■□□□ 1.24
CCDC180-213ENST00000534189 CEP350Q5VT06 3117 aa22.81■■□□□ 1.24
CCDC180-213ENST00000534189 AATKQ6ZMQ8 1374 aa22.81■■□□□ 1.24
CCDC180-213ENST00000534189 USP47Q96K76 1375 aa22.81■■□□□ 1.24
CCDC180-213ENST00000534189 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.81■■□□□ 1.24
CCDC180-213ENST00000534189 FHDC1Q9C0D6 1143 aaPredicted RBP22.81■■□□□ 1.24
CCDC180-213ENST00000534189 TMF1P82094 1093 aa22.8■■□□□ 1.24
CCDC180-213ENST00000534189 PEAK1Q9H792 1746 aa22.79■■□□□ 1.24
CCDC180-213ENST00000534189 LMO7Q8WWI1 1683 aa22.79■■□□□ 1.24
CCDC180-213ENST00000534189 PROM2Q8N271 834 aa22.79■■□□□ 1.24
CCDC180-213ENST00000534189 PARP4Q9UKK3 1724 aaKnown RBP22.79■■□□□ 1.24
CCDC180-213ENST00000534189 CD163L1Q9NR16 1453 aa22.79■■□□□ 1.24
CCDC180-213ENST00000534189 SOX12O15370 315 aa22.78■■□□□ 1.24
CCDC180-213ENST00000534189 MON2Q7Z3U7 1717 aa22.78■■□□□ 1.24
CCDC180-213ENST00000534189 ARHGEF25Q86VW2 580 aa22.78■■□□□ 1.24
CCDC180-213ENST00000534189 SGIP1Q9BQI5 828 aa22.77■■□□□ 1.24
CCDC180-213ENST00000534189 ATF5Q9Y2D1 282 aaPredicted RBP22.77■■□□□ 1.24
CCDC180-213ENST00000534189 USP31Q70CQ4 1352 aa22.76■■□□□ 1.23
CCDC180-213ENST00000534189 OVOS2A0A0G2JMS6 1433 aa22.76■■□□□ 1.23
CCDC180-213ENST00000534189 OVOS2A0A0J9YW53 1432 aa22.76■■□□□ 1.23
CCDC180-213ENST00000534189 OVOS2Q6IE36 1432 aa22.76■■□□□ 1.23
CCDC180-213ENST00000534189 EDC4Q6P2E9 1401 aaKnown RBP22.76■■□□□ 1.23
CCDC180-213ENST00000534189 CDCA8Q53HL2 280 aa22.76■■□□□ 1.23
CCDC180-213ENST00000534189 COL5A2P05997 1499 aaPredicted RBP22.76■■□□□ 1.23
CCDC180-213ENST00000534189 A0A1W2PP64 1363 aa22.76■■□□□ 1.23
CCDC180-213ENST00000534189 NME9Q86XW9 330 aa22.75■■□□□ 1.23
CCDC180-213ENST00000534189 BCL11BQ9C0K0 894 aaPredicted RBP22.74■■□□□ 1.23
CCDC180-213ENST00000534189 SBF2Q86WG5 1849 aa22.73■■□□□ 1.23
CCDC180-213ENST00000534189 PTF1AQ7RTS3 328 aa22.73■■□□□ 1.23
CCDC180-213ENST00000534189 CRB1P82279 1406 aa22.73■■□□□ 1.23
CCDC180-213ENST00000534189 GIGYF1O75420 1035 aaPredicted RBP22.72■■□□□ 1.23
CCDC180-213ENST00000534189 TOM1L2Q6ZVM7 507 aa22.72■■□□□ 1.23
CCDC180-213ENST00000534189 MTFR1LQ9H019 292 aa22.71■■□□□ 1.23
CCDC180-213ENST00000534189 AXIN2Q9Y2T1 843 aa22.71■■□□□ 1.23
CCDC180-213ENST00000534189 MAP3K5Q99683 1374 aa22.7■■□□□ 1.22
CCDC180-213ENST00000534189 WDR17Q8IZU2 1322 aa22.69■■□□□ 1.22
CCDC180-213ENST00000534189 CSB-PGBD3P0DP91 1061 aa22.69■■□□□ 1.22
CCDC180-213ENST00000534189 SLC15A2Q16348 729 aa22.69■■□□□ 1.22
CCDC180-213ENST00000534189 COL18A1P39060 1754 aa22.68■■□□□ 1.22
CCDC180-213ENST00000534189 NFAT5O94916 1531 aa22.68■■□□□ 1.22
CCDC180-213ENST00000534189 BCL9O00512 1426 aa22.67■■□□□ 1.22
CCDC180-213ENST00000534189 ANKRD36BQ8N2N9 1353 aa22.67■■□□□ 1.22
CCDC180-213ENST00000534189 STK32BQ9NY57 414 aa22.67■■□□□ 1.22
CCDC180-213ENST00000534189 USP54Q70EL1 1684 aa22.66■■□□□ 1.22
CCDC180-213ENST00000534189 TXNRD1Q16881 649 aa22.65■■□□□ 1.22
CCDC180-213ENST00000534189 COG3Q96JB2 828 aa22.65■■□□□ 1.22
CCDC180-213ENST00000534189 LRRC37A3O60309 1634 aa22.64■■□□□ 1.22
CCDC180-213ENST00000534189 ABCC6O95255 1503 aa22.64■■□□□ 1.21
CCDC180-213ENST00000534189 DDB1Q16531 1140 aa22.64■■□□□ 1.21
CCDC180-213ENST00000534189 ARXQ96QS3 562 aa22.64■■□□□ 1.21
CCDC180-213ENST00000534189 CDCA7Q9BWT1 371 aaPredicted RBP22.64■■□□□ 1.21
CCDC180-213ENST00000534189 CARD10Q9BWT7 1032 aa22.64■■□□□ 1.21
CCDC180-213ENST00000534189 GOLGB1Q14789 3259 aaKnown RBP22.62■■□□□ 1.21
CCDC180-213ENST00000534189 MARCH10Q8NA82 808 aaPredicted RBP22.61■■□□□ 1.21
CCDC180-213ENST00000534189 EIF4G2P78344 907 aaKnown RBP eCLIP22.6■■□□□ 1.21
CCDC180-213ENST00000534189 CCDC7Q96M83 1385 aa22.6■■□□□ 1.21
CCDC180-213ENST00000534189 RGPD5Q99666 1765 aa22.59■■□□□ 1.21
CCDC180-213ENST00000534189 GPR162Q16538 588 aa22.59■■□□□ 1.21
CCDC180-213ENST00000534189 SHANK3Q9BYB0 1731 aa22.58■■□□□ 1.21
CCDC180-213ENST00000534189 ERBB3P21860 1342 aa22.57■■□□□ 1.2
CCDC180-213ENST00000534189 IP6K1Q92551 441 aa22.57■■□□□ 1.2
CCDC180-213ENST00000534189 NLRP2Q9NX02 1062 aa22.57■■□□□ 1.2
CCDC180-213ENST00000534189 FYB1O15117 783 aa22.56■■□□□ 1.2
CCDC180-213ENST00000534189 ANKRD24Q8TF21 1146 aa22.56■■□□□ 1.2
CCDC180-213ENST00000534189 LTN1O94822 1766 aa22.55■■□□□ 1.2
CCDC180-213ENST00000534189 GGNBP2Q9H3C7 697 aa22.55■■□□□ 1.2
CCDC180-213ENST00000534189 EXOC5O00471 708 aa22.54■■□□□ 1.2
CCDC180-213ENST00000534189 AMPHP49418 695 aa22.54■■□□□ 1.2
CCDC180-213ENST00000534189 POLR3GLQ9BT43 218 aa22.54■■□□□ 1.2
CCDC180-213ENST00000534189 HSPA5P11021 654 aaKnown RBP22.53■■□□□ 1.2
CCDC180-213ENST00000534189 MAP3K19Q56UN5 1328 aa22.52■■□□□ 1.2
CCDC180-213ENST00000534189 PAPPAQ13219 1627 aa22.5■■□□□ 1.19
CCDC180-213ENST00000534189 LTV1Q96GA3 475 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms