RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 THSD7AQ9UPZ6 1657 aa26.53■■□□□ 1.84
LRRK1-210ENST00000534045 NINLQ9Y2I6 1382 aa26.52■■□□□ 1.84
LRRK1-210ENST00000534045 AXIN2Q9Y2T1 843 aa26.52■■□□□ 1.84
LRRK1-210ENST00000534045 COL5A2P05997 1499 aaPredicted RBP26.51■■□□□ 1.83
LRRK1-210ENST00000534045 CRB1P82279 1406 aa26.51■■□□□ 1.83
LRRK1-210ENST00000534045 EDC4Q6P2E9 1401 aaKnown RBP26.5■■□□□ 1.83
LRRK1-210ENST00000534045 A0A1W2PP64 1363 aa26.49■■□□□ 1.83
LRRK1-210ENST00000534045 USP31Q70CQ4 1352 aa26.49■■□□□ 1.83
LRRK1-210ENST00000534045 USP54Q70EL1 1684 aa26.49■■□□□ 1.83
LRRK1-210ENST00000534045 WDR17Q8IZU2 1322 aa26.48■■□□□ 1.83
LRRK1-210ENST00000534045 CD163L1Q9NR16 1453 aa26.48■■□□□ 1.83
LRRK1-210ENST00000534045 RGPD5Q99666 1765 aa26.47■■□□□ 1.83
LRRK1-210ENST00000534045 TRIM37O94972 964 aa26.46■■□□□ 1.83
LRRK1-210ENST00000534045 COG3Q96JB2 828 aa26.46■■□□□ 1.83
LRRK1-210ENST00000534045 DDB1Q16531 1140 aa26.45■■□□□ 1.82
LRRK1-210ENST00000534045 COL18A1P39060 1754 aa26.44■■□□□ 1.82
LRRK1-210ENST00000534045 C11orf95C9JLR9 678 aaPredicted RBP26.44■■□□□ 1.82
LRRK1-210ENST00000534045 CDCA7Q9BWT1 371 aaPredicted RBP26.44■■□□□ 1.82
LRRK1-210ENST00000534045 RGPD1P0DJD0 1748 aa26.44■■□□□ 1.82
LRRK1-210ENST00000534045 LTN1O94822 1766 aa26.43■■□□□ 1.82
LRRK1-210ENST00000534045 EN1Q05925 392 aaPredicted RBP26.43■■□□□ 1.82
LRRK1-210ENST00000534045 CARD10Q9BWT7 1032 aa26.43■■□□□ 1.82
LRRK1-210ENST00000534045 WNK3Q9BYP7 1800 aa26.42■■□□□ 1.82
LRRK1-210ENST00000534045 APBA3O96018 575 aa26.41■■□□□ 1.82
LRRK1-210ENST00000534045 NFAT5O94916 1531 aa26.4■■□□□ 1.82
LRRK1-210ENST00000534045 NLRP2Q9NX02 1062 aa26.4■■□□□ 1.82
LRRK1-210ENST00000534045 ANKRD36BQ8N2N9 1353 aa26.4■■□□□ 1.82
LRRK1-210ENST00000534045 PARP4Q9UKK3 1724 aaKnown RBP26.39■■□□□ 1.81
LRRK1-210ENST00000534045 POLR3GLQ9BT43 218 aa26.38■■□□□ 1.81
LRRK1-210ENST00000534045 EXOC5O00471 708 aa26.37■■□□□ 1.81
LRRK1-210ENST00000534045 ABCC6O95255 1503 aa26.36■■□□□ 1.81
LRRK1-210ENST00000534045 CCDC7Q96M83 1385 aa26.35■■□□□ 1.81
LRRK1-210ENST00000534045 AMPHP49418 695 aa26.35■■□□□ 1.81
LRRK1-210ENST00000534045 ANKRD24Q8TF21 1146 aa26.35■■□□□ 1.81
LRRK1-210ENST00000534045 TNS1Q9HBL0 1735 aaKnown RBP26.34■■□□□ 1.81
LRRK1-210ENST00000534045 EIF4G2P78344 907 aaKnown RBP eCLIP26.34■■□□□ 1.81
LRRK1-210ENST00000534045 EZH2Q15910 746 aaKnown RBP26.33■■□□□ 1.81
LRRK1-210ENST00000534045 IP6K1Q92551 441 aa26.33■■□□□ 1.81
LRRK1-210ENST00000534045 ERBB3P21860 1342 aa26.33■■□□□ 1.81
LRRK1-210ENST00000534045 LTV1Q96GA3 475 aaPredicted RBP26.32■■□□□ 1.8
LRRK1-210ENST00000534045 GGNBP2Q9H3C7 697 aa26.32■■□□□ 1.8
LRRK1-210ENST00000534045 OVOS2A0A0J9YW53 1432 aa26.31■■□□□ 1.8
LRRK1-210ENST00000534045 OVOS2Q6IE36 1432 aa26.31■■□□□ 1.8
LRRK1-210ENST00000534045 FYB1O15117 783 aa26.31■■□□□ 1.8
LRRK1-210ENST00000534045 LRRC37A3O60309 1634 aa26.31■■□□□ 1.8
LRRK1-210ENST00000534045 KIF20BQ96Q89 1820 aa26.3■■□□□ 1.8
LRRK1-210ENST00000534045 MYOM1P52179 1685 aa26.3■■□□□ 1.8
LRRK1-210ENST00000534045 OVOS2A0A0G2JMS6 1433 aa26.3■■□□□ 1.8
LRRK1-210ENST00000534045 CAMKK2Q96RR4 588 aa26.29■■□□□ 1.8
LRRK1-210ENST00000534045 IL2RBP14784 551 aa26.28■■□□□ 1.8
LRRK1-210ENST00000534045 PSDA5PKW4 1024 aaPredicted RBP26.27■■□□□ 1.8
LRRK1-210ENST00000534045 MARCH10Q8NA82 808 aaPredicted RBP26.27■■□□□ 1.8
LRRK1-210ENST00000534045 DISP2A7MBM2 1401 aa26.26■■□□□ 1.79
LRRK1-210ENST00000534045 MAP3K19Q56UN5 1328 aa26.26■■□□□ 1.79
LRRK1-210ENST00000534045 FBLN1P23142 703 aa26.26■■□□□ 1.79
LRRK1-210ENST00000534045 PARD3Q8TEW0 1356 aa26.25■■□□□ 1.79
LRRK1-210ENST00000534045 HSPA5P11021 654 aaKnown RBP26.25■■□□□ 1.79
LRRK1-210ENST00000534045 NBPF14Q5TI25 921 aa26.25■■□□□ 1.79
LRRK1-210ENST00000534045 HOXC9P31274 260 aa26.24■■□□□ 1.79
LRRK1-210ENST00000534045 FAM208AQ9UK61 1670 aaKnown RBP26.24■■□□□ 1.79
LRRK1-210ENST00000534045 R3HDM1Q15032 1099 aaKnown RBP26.23■■□□□ 1.79
LRRK1-210ENST00000534045 RRS1Q15050 365 aaKnown RBP26.23■■□□□ 1.79
LRRK1-210ENST00000534045 BCL11BQ9C0K0 894 aaPredicted RBP26.23■■□□□ 1.79
LRRK1-210ENST00000534045 CARD14Q9BXL6 1004 aa26.21■■□□□ 1.79
LRRK1-210ENST00000534045 SBF2Q86WG5 1849 aa26.21■■□□□ 1.79
LRRK1-210ENST00000534045 NSD3Q9BZ95 1437 aa26.18■■□□□ 1.78
LRRK1-210ENST00000534045 PEAK1Q9H792 1746 aa26.18■■□□□ 1.78
LRRK1-210ENST00000534045 CGNL1Q0VF96 1302 aa26.17■■□□□ 1.78
LRRK1-210ENST00000534045 PLSCR1O15162 318 aa26.17■■□□□ 1.78
LRRK1-210ENST00000534045 PPM1GO15355 546 aaPredicted RBP26.15■■□□□ 1.78
LRRK1-210ENST00000534045 DDX54Q8TDD1 881 aaKnown RBP26.15■■□□□ 1.78
LRRK1-210ENST00000534045 RTL1A6NKG5 1358 aa26.14■■□□□ 1.78
LRRK1-210ENST00000534045 TNS2Q63HR2 1409 aa26.14■■□□□ 1.77
LRRK1-210ENST00000534045 SMG6Q86US8 1419 aaKnown RBP26.14■■□□□ 1.77
LRRK1-210ENST00000534045 ACSBG1Q96GR2 724 aa26.13■■□□□ 1.77
LRRK1-210ENST00000534045 BCL9O00512 1426 aa26.13■■□□□ 1.77
LRRK1-210ENST00000534045 RREB1Q92766 1687 aa26.12■■□□□ 1.77
LRRK1-210ENST00000534045 PTF1AQ7RTS3 328 aa26.12■■□□□ 1.77
LRRK1-210ENST00000534045 HSP90AB2PQ58FF8 381 aa26.11■■□□□ 1.77
LRRK1-210ENST00000534045 RGPD2P0DJD1 1756 aa26.1■■□□□ 1.77
LRRK1-210ENST00000534045 KCNQ2O43526 872 aa26.1■■□□□ 1.77
LRRK1-210ENST00000534045 RAPGEF4Q8WZA2 1011 aa26.1■■□□□ 1.77
LRRK1-210ENST00000534045 PANK3Q9H999 370 aa26.1■■□□□ 1.77
LRRK1-210ENST00000534045 RGPD3A6NKT7 1758 aaPredicted RBP26.1■■□□□ 1.77
LRRK1-210ENST00000534045 RGPD4Q7Z3J3 1758 aa26.1■■□□□ 1.77
LRRK1-210ENST00000534045 NBPF6Q5VWK0 638 aa26.09■■□□□ 1.77
LRRK1-210ENST00000534045 ZCRB1Q8TBF4 217 aaKnown RBP26.09■■□□□ 1.77
LRRK1-210ENST00000534045 NBPF4Q96M43 638 aa26.09■■□□□ 1.77
LRRK1-210ENST00000534045 FLT4P35916 1363 aa26.08■■□□□ 1.77
LRRK1-210ENST00000534045 NUP188Q5SRE5 1749 aa26.08■■□□□ 1.76
LRRK1-210ENST00000534045 ANKRD26Q9UPS8 1709 aa26.08■■□□□ 1.76
LRRK1-210ENST00000534045 KIF24Q5T7B8 1368 aa26.07■■□□□ 1.76
LRRK1-210ENST00000534045 EMILIN1Q9Y6C2 1016 aa26.07■■□□□ 1.76
LRRK1-210ENST00000534045 INSRP06213 1382 aa26.07■■□□□ 1.76
LRRK1-210ENST00000534045 TNNT2P45379 298 aaPredicted RBP26.06■■□□□ 1.76
LRRK1-210ENST00000534045 USHBP1Q8N6Y0 703 aa26.06■■□□□ 1.76
LRRK1-210ENST00000534045 TATP17735 454 aaPredicted RBP26.05■■□□□ 1.76
LRRK1-210ENST00000534045 TXNRD1Q16881 649 aa26.05■■□□□ 1.76
LRRK1-210ENST00000534045 KAT6BQ8WYB5 2073 aa26.05■■□□□ 1.76
LRRK1-210ENST00000534045 SYTL4Q96C24 671 aaPredicted RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms