RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 PUS7Q96PZ0 661 aaKnown RBP24.73■■□□□ 1.55
CAPN5-207ENST00000533889 COL18A1P39060 1754 aa24.72■■□□□ 1.55
CAPN5-207ENST00000533889 CD163L1Q9NR16 1453 aa24.71■■□□□ 1.55
CAPN5-207ENST00000533889 PSDA5PKW4 1024 aaPredicted RBP24.71■■□□□ 1.55
CAPN5-207ENST00000533889 SLC24A1O60721 1099 aa24.71■■□□□ 1.55
CAPN5-207ENST00000533889 EZH2Q15910 746 aaKnown RBP24.71■■□□□ 1.55
CAPN5-207ENST00000533889 TESK2Q96S53 571 aa24.71■■□□□ 1.55
CAPN5-207ENST00000533889 DISP2A7MBM2 1401 aa24.69■■□□□ 1.54
CAPN5-207ENST00000533889 TNS1Q9HBL0 1735 aaKnown RBP24.69■■□□□ 1.54
CAPN5-207ENST00000533889 USP31Q70CQ4 1352 aa24.69■■□□□ 1.54
CAPN5-207ENST00000533889 DDB1Q16531 1140 aa24.69■■□□□ 1.54
CAPN5-207ENST00000533889 PARP4Q9UKK3 1724 aaKnown RBP24.68■■□□□ 1.54
CAPN5-207ENST00000533889 RGPD5Q99666 1765 aa24.67■■□□□ 1.54
CAPN5-207ENST00000533889 NFAT5O94916 1531 aa24.67■■□□□ 1.54
CAPN5-207ENST00000533889 C11orf95C9JLR9 678 aaPredicted RBP24.67■■□□□ 1.54
CAPN5-207ENST00000533889 CAMKK2Q96RR4 588 aa24.67■■□□□ 1.54
CAPN5-207ENST00000533889 CARD10Q9BWT7 1032 aa24.67■■□□□ 1.54
CAPN5-207ENST00000533889 EDC4Q6P2E9 1401 aaKnown RBP24.67■■□□□ 1.54
CAPN5-207ENST00000533889 A0A1W2PP64 1363 aa24.67■■□□□ 1.54
CAPN5-207ENST00000533889 CDCA7Q9BWT1 371 aaPredicted RBP24.66■■□□□ 1.54
CAPN5-207ENST00000533889 PCGF6Q9BYE7 350 aa24.65■■□□□ 1.54
CAPN5-207ENST00000533889 R3HDM1Q15032 1099 aaKnown RBP24.63■■□□□ 1.53
CAPN5-207ENST00000533889 NINLQ9Y2I6 1382 aa24.63■■□□□ 1.53
CAPN5-207ENST00000533889 OVOS2A0A0G2JMS6 1433 aa24.62■■□□□ 1.53
CAPN5-207ENST00000533889 OVOS2A0A0J9YW53 1432 aa24.62■■□□□ 1.53
CAPN5-207ENST00000533889 OVOS2Q6IE36 1432 aa24.62■■□□□ 1.53
CAPN5-207ENST00000533889 PARD3Q8TEW0 1356 aa24.62■■□□□ 1.53
CAPN5-207ENST00000533889 TMF1P82094 1093 aa24.61■■□□□ 1.53
CAPN5-207ENST00000533889 USP47Q96K76 1375 aa24.61■■□□□ 1.53
CAPN5-207ENST00000533889 LRRC37A3O60309 1634 aa24.6■■□□□ 1.53
CAPN5-207ENST00000533889 USP54Q70EL1 1684 aa24.59■■□□□ 1.53
CAPN5-207ENST00000533889 CCDC7Q96M83 1385 aa24.59■■□□□ 1.53
CAPN5-207ENST00000533889 EXOC5O00471 708 aa24.59■■□□□ 1.53
CAPN5-207ENST00000533889 NLRP2Q9NX02 1062 aa24.59■■□□□ 1.53
CAPN5-207ENST00000533889 ABCC6O95255 1503 aa24.59■■□□□ 1.53
CAPN5-207ENST00000533889 MARCH10Q8NA82 808 aaPredicted RBP24.58■■□□□ 1.53
CAPN5-207ENST00000533889 COG3Q96JB2 828 aa24.57■■□□□ 1.52
CAPN5-207ENST00000533889 TIMELESSQ9UNS1 1208 aa24.57■■□□□ 1.52
CAPN5-207ENST00000533889 LTN1O94822 1766 aa24.57■■□□□ 1.52
CAPN5-207ENST00000533889 WNK3Q9BYP7 1800 aa24.56■■□□□ 1.52
CAPN5-207ENST00000533889 NBPF14Q5TI25 921 aa24.56■■□□□ 1.52
CAPN5-207ENST00000533889 ANKRD24Q8TF21 1146 aa24.56■■□□□ 1.52
CAPN5-207ENST00000533889 ERBB3P21860 1342 aa24.56■■□□□ 1.52
CAPN5-207ENST00000533889 PEAK1Q9H792 1746 aa24.55■■□□□ 1.52
CAPN5-207ENST00000533889 BCL11BQ9C0K0 894 aaPredicted RBP24.54■■□□□ 1.52
CAPN5-207ENST00000533889 CDCA8Q53HL2 280 aa24.53■■□□□ 1.52
CAPN5-207ENST00000533889 CLSPNQ9HAW4 1339 aa24.53■■□□□ 1.52
CAPN5-207ENST00000533889 ANKRD36BQ8N2N9 1353 aa24.53■■□□□ 1.52
CAPN5-207ENST00000533889 IP6K1Q92551 441 aa24.51■■□□□ 1.51
CAPN5-207ENST00000533889 SBF2Q86WG5 1849 aa24.51■■□□□ 1.51
CAPN5-207ENST00000533889 LRP5O75197 1615 aa24.5■■□□□ 1.51
CAPN5-207ENST00000533889 IL2RBP14784 551 aa24.5■■□□□ 1.51
CAPN5-207ENST00000533889 PTF1AQ7RTS3 328 aa24.5■■□□□ 1.51
CAPN5-207ENST00000533889 LTV1Q96GA3 475 aaPredicted RBP24.5■■□□□ 1.51
CAPN5-207ENST00000533889 RREB1Q92766 1687 aa24.5■■□□□ 1.51
CAPN5-207ENST00000533889 PLSCR1O15162 318 aa24.49■■□□□ 1.51
CAPN5-207ENST00000533889 FBLN1P23142 703 aa24.48■■□□□ 1.51
CAPN5-207ENST00000533889 AMPHP49418 695 aa24.48■■□□□ 1.51
CAPN5-207ENST00000533889 NUP188Q5SRE5 1749 aa24.47■■□□□ 1.51
CAPN5-207ENST00000533889 BCL9O00512 1426 aa24.47■■□□□ 1.51
CAPN5-207ENST00000533889 TNS2Q63HR2 1409 aa24.46■■□□□ 1.51
CAPN5-207ENST00000533889 MAP3K19Q56UN5 1328 aa24.46■■□□□ 1.51
CAPN5-207ENST00000533889 GGNBP2Q9H3C7 697 aa24.46■■□□□ 1.51
CAPN5-207ENST00000533889 FYB1O15117 783 aa24.45■■□□□ 1.5
CAPN5-207ENST00000533889 HOXC9P31274 260 aa24.44■■□□□ 1.5
CAPN5-207ENST00000533889 KCNQ2O43526 872 aa24.42■■□□□ 1.5
CAPN5-207ENST00000533889 CCER1Q8TC90 406 aaPredicted RBP24.42■■□□□ 1.5
CAPN5-207ENST00000533889 ACSBG1Q96GR2 724 aa24.42■■□□□ 1.5
CAPN5-207ENST00000533889 RRS1Q15050 365 aaKnown RBP24.4■■□□□ 1.5
CAPN5-207ENST00000533889 RGPD3A6NKT7 1758 aaPredicted RBP24.39■■□□□ 1.5
CAPN5-207ENST00000533889 RGPD4Q7Z3J3 1758 aa24.39■■□□□ 1.5
CAPN5-207ENST00000533889 PROM2Q8N271 834 aa24.39■■□□□ 1.49
CAPN5-207ENST00000533889 DDX54Q8TDD1 881 aaKnown RBP24.38■■□□□ 1.49
CAPN5-207ENST00000533889 TXNRD1Q16881 649 aa24.37■■□□□ 1.49
CAPN5-207ENST00000533889 POLR3GLQ9BT43 218 aa24.37■■□□□ 1.49
CAPN5-207ENST00000533889 FAM208AQ9UK61 1670 aaKnown RBP24.37■■□□□ 1.49
CAPN5-207ENST00000533889 CARD14Q9BXL6 1004 aa24.36■■□□□ 1.49
CAPN5-207ENST00000533889 RTL1A6NKG5 1358 aa24.35■■□□□ 1.49
CAPN5-207ENST00000533889 ANO8Q9HCE9 1232 aaPredicted RBP24.35■■□□□ 1.49
CAPN5-207ENST00000533889 KAT6BQ8WYB5 2073 aa24.34■■□□□ 1.49
CAPN5-207ENST00000533889 SPON1Q9HCB6 807 aa24.33■■□□□ 1.49
CAPN5-207ENST00000533889 NHSQ6T4R5 1651 aa24.33■■□□□ 1.49
CAPN5-207ENST00000533889 KIF20BQ96Q89 1820 aa24.33■■□□□ 1.48
CAPN5-207ENST00000533889 STK32BQ9NY57 414 aa24.32■■□□□ 1.48
CAPN5-207ENST00000533889 NSD3Q9BZ95 1437 aa24.32■■□□□ 1.48
CAPN5-207ENST00000533889 NBPF6Q5VWK0 638 aa24.31■■□□□ 1.48
CAPN5-207ENST00000533889 NBPF4Q96M43 638 aa24.31■■□□□ 1.48
CAPN5-207ENST00000533889 MYOM1P52179 1685 aa24.3■■□□□ 1.48
CAPN5-207ENST00000533889 SMG6Q86US8 1419 aaKnown RBP24.3■■□□□ 1.48
CAPN5-207ENST00000533889 RGPD2P0DJD1 1756 aa24.3■■□□□ 1.48
CAPN5-207ENST00000533889 EIF4G2P78344 907 aaKnown RBP eCLIP24.3■■□□□ 1.48
CAPN5-207ENST00000533889 HSP90AB2PQ58FF8 381 aa24.3■■□□□ 1.48
CAPN5-207ENST00000533889 ZCRB1Q8TBF4 217 aaKnown RBP24.3■■□□□ 1.48
CAPN5-207ENST00000533889 PPP1R1BQ9UD71 204 aaPredicted RBP24.3■■□□□ 1.48
CAPN5-207ENST00000533889 USHBP1Q8N6Y0 703 aa24.29■■□□□ 1.48
CAPN5-207ENST00000533889 HSPA5P11021 654 aaKnown RBP24.27■■□□□ 1.48
CAPN5-207ENST00000533889 SLC15A2Q16348 729 aa24.27■■□□□ 1.48
CAPN5-207ENST00000533889 RAPGEF4Q8WZA2 1011 aa24.27■■□□□ 1.48
CAPN5-207ENST00000533889 SYTL4Q96C24 671 aaPredicted RBP24.27■■□□□ 1.48
CAPN5-207ENST00000533889 INSRP06213 1382 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms