RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 FYB1O15117 783 aa24.11■■□□□ 1.45
NXF1-217ENST00000533671 FAM98CQ17RN3 349 aaKnown RBP24.11■■□□□ 1.45
NXF1-217ENST00000533671 CARD14Q9BXL6 1004 aa24.11■■□□□ 1.45
NXF1-217ENST00000533671 LARP1Q6PKG0 1096 aaKnown RBP24.1■■□□□ 1.45
NXF1-217ENST00000533671 COL5A2P05997 1499 aaPredicted RBP24.09■■□□□ 1.45
NXF1-217ENST00000533671 CSB-PGBD3P0DP91 1061 aa24.09■■□□□ 1.45
NXF1-217ENST00000533671 SEPT12Q8IYM1 358 aa24.09■■□□□ 1.45
NXF1-217ENST00000533671 PANK3Q9H999 370 aa24.09■■□□□ 1.45
NXF1-217ENST00000533671 SPATA31A1Q5TZJ5 1347 aa24.09■■□□□ 1.45
NXF1-217ENST00000533671 BRWD3Q6RI45 1802 aa24.08■■□□□ 1.45
NXF1-217ENST00000533671 CGNL1Q0VF96 1302 aa24.08■■□□□ 1.44
NXF1-217ENST00000533671 KIF7Q2M1P5 1343 aa24.08■■□□□ 1.44
NXF1-217ENST00000533671 TOM1L2Q6ZVM7 507 aa24.07■■□□□ 1.44
NXF1-217ENST00000533671 AXIN2Q9Y2T1 843 aa24.07■■□□□ 1.44
NXF1-217ENST00000533671 ONECUT3O60422 494 aaPredicted RBP24.05■■□□□ 1.44
NXF1-217ENST00000533671 ABCC6O95255 1503 aa24.05■■□□□ 1.44
NXF1-217ENST00000533671 CRB1P82279 1406 aa24.04■■□□□ 1.44
NXF1-217ENST00000533671 AMPHP49418 695 aa24.04■■□□□ 1.44
NXF1-217ENST00000533671 TCP11L2Q8N4U5 519 aa24.04■■□□□ 1.44
NXF1-217ENST00000533671 WDR17Q8IZU2 1322 aa24.03■■□□□ 1.44
NXF1-217ENST00000533671 FBLN1P23142 703 aa24.01■■□□□ 1.43
NXF1-217ENST00000533671 THRAP3Q9Y2W1 955 aaKnown RBP24.01■■□□□ 1.43
NXF1-217ENST00000533671 KRT27Q7Z3Y8 459 aa24■■□□□ 1.43
NXF1-217ENST00000533671 KNSTRNQ9Y448 316 aa24■■□□□ 1.43
NXF1-217ENST00000533671 MAP3K19Q56UN5 1328 aa24■■□□□ 1.43
NXF1-217ENST00000533671 ANKRD26Q9UPS8 1709 aa23.99■■□□□ 1.43
NXF1-217ENST00000533671 RRS1Q15050 365 aaKnown RBP23.99■■□□□ 1.43
NXF1-217ENST00000533671 BARGINQ6ZT62 677 aa23.99■■□□□ 1.43
NXF1-217ENST00000533671 IP6K1Q92551 441 aa23.99■■□□□ 1.43
NXF1-217ENST00000533671 CCDC7Q96M83 1385 aa23.99■■□□□ 1.43
NXF1-217ENST00000533671 ANKRD24Q8TF21 1146 aa23.98■■□□□ 1.43
NXF1-217ENST00000533671 UPF1Q92900 1129 aaKnown RBP eCLIP23.98■■□□□ 1.43
NXF1-217ENST00000533671 THSD7AQ9UPZ6 1657 aa23.98■■□□□ 1.43
NXF1-217ENST00000533671 BLMP54132 1417 aaPredicted RBP23.97■■□□□ 1.43
NXF1-217ENST00000533671 LTV1Q96GA3 475 aaPredicted RBP23.97■■□□□ 1.43
NXF1-217ENST00000533671 MAP2P11137 1827 aaKnown RBP23.96■■□□□ 1.43
NXF1-217ENST00000533671 ERBB3P21860 1342 aa23.96■■□□□ 1.43
NXF1-217ENST00000533671 NLRP2Q9NX02 1062 aa23.96■■□□□ 1.43
NXF1-217ENST00000533671 WASHC2AQ641Q2 1341 aa23.95■■□□□ 1.42
NXF1-217ENST00000533671 HOXC9P31274 260 aa23.95■■□□□ 1.42
NXF1-217ENST00000533671 CARD10Q9BWT7 1032 aa23.95■■□□□ 1.42
NXF1-217ENST00000533671 PDE3BQ13370 1112 aa23.94■■□□□ 1.42
NXF1-217ENST00000533671 RTL1A6NKG5 1358 aa23.93■■□□□ 1.42
NXF1-217ENST00000533671 ZEB1P37275 1124 aaPredicted RBP23.93■■□□□ 1.42
NXF1-217ENST00000533671 TNNT2P45379 298 aaPredicted RBP23.93■■□□□ 1.42
NXF1-217ENST00000533671 WNK3Q9BYP7 1800 aa23.93■■□□□ 1.42
NXF1-217ENST00000533671 NSD2O96028 1365 aa23.92■■□□□ 1.42
NXF1-217ENST00000533671 PPM1GO15355 546 aaPredicted RBP23.92■■□□□ 1.42
NXF1-217ENST00000533671 FAM208AQ9UK61 1670 aaKnown RBP23.92■■□□□ 1.42
NXF1-217ENST00000533671 PARP4Q9UKK3 1724 aaKnown RBP23.9■■□□□ 1.42
NXF1-217ENST00000533671 MORC1Q86VD1 984 aa23.9■■□□□ 1.42
NXF1-217ENST00000533671 CDCA7Q9BWT1 371 aaPredicted RBP23.9■■□□□ 1.42
NXF1-217ENST00000533671 SMG6Q86US8 1419 aaKnown RBP23.9■■□□□ 1.42
NXF1-217ENST00000533671 FLT4P35916 1363 aa23.89■■□□□ 1.41
NXF1-217ENST00000533671 DDB1Q16531 1140 aa23.88■■□□□ 1.41
NXF1-217ENST00000533671 FAM182BQ5T319 152 aa23.88■■□□□ 1.41
NXF1-217ENST00000533671 EMILIN1Q9Y6C2 1016 aa23.88■■□□□ 1.41
NXF1-217ENST00000533671 KIF24Q5T7B8 1368 aa23.88■■□□□ 1.41
NXF1-217ENST00000533671 SF3B2Q13435 895 aaKnown RBP23.87■■□□□ 1.41
NXF1-217ENST00000533671 RGPD2P0DJD1 1756 aa23.87■■□□□ 1.41
NXF1-217ENST00000533671 PEAK1Q9H792 1746 aa23.87■■□□□ 1.41
NXF1-217ENST00000533671 CCDC125Q86Z20 511 aa23.86■■□□□ 1.41
NXF1-217ENST00000533671 HSP90AB2PQ58FF8 381 aa23.85■■□□□ 1.41
NXF1-217ENST00000533671 INSRP06213 1382 aa23.84■■□□□ 1.41
NXF1-217ENST00000533671 CNGB1Q14028 1251 aaPredicted RBP23.84■■□□□ 1.41
NXF1-217ENST00000533671 LRRC37A3O60309 1634 aa23.84■■□□□ 1.41
NXF1-217ENST00000533671 EXOC5O00471 708 aa23.83■■□□□ 1.41
NXF1-217ENST00000533671 IL2RBP14784 551 aa23.83■■□□□ 1.41
NXF1-217ENST00000533671 AMER1Q5JTC6 1135 aaPredicted RBP23.83■■□□□ 1.41
NXF1-217ENST00000533671 FAM196AQ6ZSG2 479 aa23.83■■□□□ 1.41
NXF1-217ENST00000533671 POLKQ9UBT6 870 aa23.83■■□□□ 1.41
NXF1-217ENST00000533671 CC2D1BQ5T0F9 858 aaKnown RBP23.82■■□□□ 1.4
NXF1-217ENST00000533671 PER1O15534 1290 aaPredicted RBP23.81■■□□□ 1.4
NXF1-217ENST00000533671 DISP2A7MBM2 1401 aa23.8■■□□□ 1.4
NXF1-217ENST00000533671 RGPD1P0DJD0 1748 aa23.79■■□□□ 1.4
NXF1-217ENST00000533671 NBPF6Q5VWK0 638 aa23.77■■□□□ 1.4
NXF1-217ENST00000533671 NBPF4Q96M43 638 aa23.77■■□□□ 1.4
NXF1-217ENST00000533671 OVOS2A0A0G2JMS6 1433 aa23.76■■□□□ 1.39
NXF1-217ENST00000533671 KAT6BQ8WYB5 2073 aa23.76■■□□□ 1.39
NXF1-217ENST00000533671 USHBP1Q8N6Y0 703 aa23.76■■□□□ 1.39
NXF1-217ENST00000533671 EP400Q96L91 3159 aa23.75■■□□□ 1.39
NXF1-217ENST00000533671 TRIM37O94972 964 aa23.75■■□□□ 1.39
NXF1-217ENST00000533671 RAPGEF4Q8WZA2 1011 aa23.75■■□□□ 1.39
NXF1-217ENST00000533671 TNS2Q63HR2 1409 aa23.75■■□□□ 1.39
NXF1-217ENST00000533671 BAG6P46379 1132 aa23.73■■□□□ 1.39
NXF1-217ENST00000533671 MARCH10Q8NA82 808 aaPredicted RBP23.73■■□□□ 1.39
NXF1-217ENST00000533671 NPC1L1Q9UHC9 1359 aa23.73■■□□□ 1.39
NXF1-217ENST00000533671 TATP17735 454 aaPredicted RBP23.72■■□□□ 1.39
NXF1-217ENST00000533671 SBF2Q86WG5 1849 aa23.7■■□□□ 1.39
NXF1-217ENST00000533671 EIF4A2Q14240 407 aaKnown RBP23.7■■□□□ 1.38
NXF1-217ENST00000533671 DEFB132Q7Z7B7 95 aa23.7■■□□□ 1.38
NXF1-217ENST00000533671 DDX54Q8TDD1 881 aaKnown RBP23.7■■□□□ 1.38
NXF1-217ENST00000533671 TNS1Q9HBL0 1735 aaKnown RBP23.69■■□□□ 1.38
NXF1-217ENST00000533671 MTHFSP49914 203 aa23.68■■□□□ 1.38
NXF1-217ENST00000533671 ZCRB1Q8TBF4 217 aaKnown RBP23.68■■□□□ 1.38
NXF1-217ENST00000533671 EYA1Q99502 592 aa23.68■■□□□ 1.38
NXF1-217ENST00000533671 MEGF6O75095 1541 aa23.68■■□□□ 1.38
NXF1-217ENST00000533671 APBA3O96018 575 aa23.67■■□□□ 1.38
NXF1-217ENST00000533671 EN1Q05925 392 aaPredicted RBP23.64■■□□□ 1.37
NXF1-217ENST00000533671 DDX10Q13206 875 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms