RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 USP21Q9UK80 565 aa17.34■□□□□ 0.37
RPUSD4-208ENST00000533628 UNC5CLQ8IV45 518 aa17.33■□□□□ 0.37
RPUSD4-208ENST00000533628 MAP2P11137 1827 aaKnown RBP17.33■□□□□ 0.36
RPUSD4-208ENST00000533628 RGPD5Q99666 1765 aa17.33■□□□□ 0.36
RPUSD4-208ENST00000533628 ZBTB7CA1YPR0 619 aa17.33■□□□□ 0.36
RPUSD4-208ENST00000533628 IP6K1Q92551 441 aa17.33■□□□□ 0.36
RPUSD4-208ENST00000533628 TNNT2P45379 298 aaPredicted RBP17.32■□□□□ 0.36
RPUSD4-208ENST00000533628 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
RPUSD4-208ENST00000533628 ATRNO75882 1429 aa17.32■□□□□ 0.36
RPUSD4-208ENST00000533628 SMG6Q86US8 1419 aaKnown RBP17.32■□□□□ 0.36
RPUSD4-208ENST00000533628 ZNF772Q68DY9 489 aaPredicted RBP17.32■□□□□ 0.36
RPUSD4-208ENST00000533628 KIF24Q5T7B8 1368 aa17.32■□□□□ 0.36
RPUSD4-208ENST00000533628 COL5A2P05997 1499 aaPredicted RBP17.32■□□□□ 0.36
RPUSD4-208ENST00000533628 RTL1A6NKG5 1358 aa17.31■□□□□ 0.36
RPUSD4-208ENST00000533628 HOXC9P31274 260 aa17.31■□□□□ 0.36
RPUSD4-208ENST00000533628 PHF23Q9BUL5 403 aaPredicted RBP17.31■□□□□ 0.36
RPUSD4-208ENST00000533628 PARD3Q8TEW0 1356 aa17.3■□□□□ 0.36
RPUSD4-208ENST00000533628 CNGB1Q14028 1251 aaPredicted RBP17.3■□□□□ 0.36
RPUSD4-208ENST00000533628 POTEAQ6S8J7 498 aa17.3■□□□□ 0.36
RPUSD4-208ENST00000533628 BLMP54132 1417 aaPredicted RBP17.3■□□□□ 0.36
RPUSD4-208ENST00000533628 AMPHP49418 695 aa17.29■□□□□ 0.36
RPUSD4-208ENST00000533628 VPS72Q15906 364 aa17.28■□□□□ 0.36
RPUSD4-208ENST00000533628 QTRT2Q9H974 415 aaKnown RBP17.28■□□□□ 0.36
RPUSD4-208ENST00000533628 FLT4P35916 1363 aa17.28■□□□□ 0.36
RPUSD4-208ENST00000533628 TRPC5Q9UL62 973 aaPredicted RBP17.28■□□□□ 0.36
RPUSD4-208ENST00000533628 INSRP06213 1382 aa17.28■□□□□ 0.36
RPUSD4-208ENST00000533628 HSP90AB2PQ58FF8 381 aa17.27■□□□□ 0.36
RPUSD4-208ENST00000533628 LARP1Q6PKG0 1096 aaKnown RBP17.27■□□□□ 0.35
RPUSD4-208ENST00000533628 STRN4Q9NRL3 753 aa17.27■□□□□ 0.35
RPUSD4-208ENST00000533628 ERBB3P21860 1342 aa17.27■□□□□ 0.35
RPUSD4-208ENST00000533628 WDR17Q8IZU2 1322 aa17.26■□□□□ 0.35
RPUSD4-208ENST00000533628 EVA1CP58658 441 aa17.25■□□□□ 0.35
RPUSD4-208ENST00000533628 ANKRD24Q8TF21 1146 aa17.25■□□□□ 0.35
RPUSD4-208ENST00000533628 SPATA31A5Q5VU36 1347 aa17.25■□□□□ 0.35
RPUSD4-208ENST00000533628 SPATA31A7Q8IWB4 1347 aa17.25■□□□□ 0.35
RPUSD4-208ENST00000533628 CDK12Q9NYV4 1490 aaPredicted RBP17.25■□□□□ 0.35
RPUSD4-208ENST00000533628 GLI3P10071 1580 aa17.25■□□□□ 0.35
RPUSD4-208ENST00000533628 PPP2R1AP30153 589 aa17.25■□□□□ 0.35
RPUSD4-208ENST00000533628 MTHFSP49914 203 aa17.25■□□□□ 0.35
RPUSD4-208ENST00000533628 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
RPUSD4-208ENST00000533628 GJD4Q96KN9 370 aaPredicted RBP17.24■□□□□ 0.35
RPUSD4-208ENST00000533628 CRB1P82279 1406 aa17.24■□□□□ 0.35
RPUSD4-208ENST00000533628 RALBP1Q15311 655 aa17.24■□□□□ 0.35
RPUSD4-208ENST00000533628 SPATA31A1Q5TZJ5 1347 aa17.24■□□□□ 0.35
RPUSD4-208ENST00000533628 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
RPUSD4-208ENST00000533628 RBM6P78332 1123 aaKnown RBP17.22■□□□□ 0.35
RPUSD4-208ENST00000533628 LTV1Q96GA3 475 aaPredicted RBP17.22■□□□□ 0.35
RPUSD4-208ENST00000533628 CARD10Q9BWT7 1032 aa17.21■□□□□ 0.35
RPUSD4-208ENST00000533628 FAM208AQ9UK61 1670 aaKnown RBP17.21■□□□□ 0.35
RPUSD4-208ENST00000533628 RGPD2P0DJD1 1756 aa17.2■□□□□ 0.34
RPUSD4-208ENST00000533628 COL3A1P02461 1466 aaPredicted RBP17.2■□□□□ 0.34
RPUSD4-208ENST00000533628 ONECUT3O60422 494 aaPredicted RBP17.2■□□□□ 0.34
RPUSD4-208ENST00000533628 CSB-PGBD3P0DP91 1061 aa17.2■□□□□ 0.34
RPUSD4-208ENST00000533628 RXRBP28702 533 aa17.2■□□□□ 0.34
RPUSD4-208ENST00000533628 EIF4A2Q14240 407 aaKnown RBP17.2■□□□□ 0.34
RPUSD4-208ENST00000533628 TOM1L2Q6ZVM7 507 aa17.2■□□□□ 0.34
RPUSD4-208ENST00000533628 CCDC9Q9Y3X0 531 aaKnown RBP17.19■□□□□ 0.34
RPUSD4-208ENST00000533628 NBPF6Q5VWK0 638 aa17.19■□□□□ 0.34
RPUSD4-208ENST00000533628 NBPF4Q96M43 638 aa17.19■□□□□ 0.34
RPUSD4-208ENST00000533628 NCAPD2Q15021 1401 aa17.18■□□□□ 0.34
RPUSD4-208ENST00000533628 BARGINQ6ZT62 677 aa17.18■□□□□ 0.34
RPUSD4-208ENST00000533628 TCP11L2Q8N4U5 519 aa17.18■□□□□ 0.34
RPUSD4-208ENST00000533628 IL13P35225 146 aa17.17■□□□□ 0.34
RPUSD4-208ENST00000533628 NLRP2Q9NX02 1062 aa17.17■□□□□ 0.34
RPUSD4-208ENST00000533628 THRAP3Q9Y2W1 955 aaKnown RBP17.17■□□□□ 0.34
RPUSD4-208ENST00000533628 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
RPUSD4-208ENST00000533628 EYA1Q99502 592 aa17.16■□□□□ 0.34
RPUSD4-208ENST00000533628 USP35Q9P2H5 1018 aa17.16■□□□□ 0.34
RPUSD4-208ENST00000533628 THSD7AQ9UPZ6 1657 aa17.16■□□□□ 0.34
RPUSD4-208ENST00000533628 DISP2A7MBM2 1401 aa17.16■□□□□ 0.34
RPUSD4-208ENST00000533628 RGPD1P0DJD0 1748 aa17.16■□□□□ 0.34
RPUSD4-208ENST00000533628 WNK3Q9BYP7 1800 aa17.15■□□□□ 0.34
RPUSD4-208ENST00000533628 FAM98CQ17RN3 349 aaKnown RBP17.15■□□□□ 0.34
RPUSD4-208ENST00000533628 RGS12O14924 1447 aa17.15■□□□□ 0.34
RPUSD4-208ENST00000533628 IGSF1Q8N6C5 1336 aa17.14■□□□□ 0.33
RPUSD4-208ENST00000533628 GTF3C3Q9Y5Q9 886 aa17.14■□□□□ 0.33
RPUSD4-208ENST00000533628 DIAPH1O60610 1272 aaKnown RBP17.13■□□□□ 0.33
RPUSD4-208ENST00000533628 USHBP1Q8N6Y0 703 aa17.13■□□□□ 0.33
RPUSD4-208ENST00000533628 SEPT12Q8IYM1 358 aa17.12■□□□□ 0.33
RPUSD4-208ENST00000533628 ANP32CO43423 234 aa17.11■□□□□ 0.33
RPUSD4-208ENST00000533628 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
RPUSD4-208ENST00000533628 PARP4Q9UKK3 1724 aaKnown RBP17.11■□□□□ 0.33
RPUSD4-208ENST00000533628 ILDR2Q71H61 639 aa17.1■□□□□ 0.33
RPUSD4-208ENST00000533628 MEGF6O75095 1541 aa17.1■□□□□ 0.33
RPUSD4-208ENST00000533628 IL2RBP14784 551 aa17.09■□□□□ 0.33
RPUSD4-208ENST00000533628 CDCA7Q9BWT1 371 aaPredicted RBP17.09■□□□□ 0.33
RPUSD4-208ENST00000533628 BRWD3Q6RI45 1802 aa17.09■□□□□ 0.33
RPUSD4-208ENST00000533628 CENPBP07199 599 aaPredicted RBP17.09■□□□□ 0.33
RPUSD4-208ENST00000533628 KDRP35968 1356 aa17.09■□□□□ 0.33
RPUSD4-208ENST00000533628 LRRC37A3O60309 1634 aa17.09■□□□□ 0.33
RPUSD4-208ENST00000533628 AEBP1Q8IUX7 1158 aa17.08■□□□□ 0.33
RPUSD4-208ENST00000533628 CCDC184Q52MB2 194 aa17.07■□□□□ 0.32
RPUSD4-208ENST00000533628 OVOS2A0A0G2JMS6 1433 aa17.07■□□□□ 0.32
RPUSD4-208ENST00000533628 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
RPUSD4-208ENST00000533628 SULT6B1Q6IMI4 303 aa17.06■□□□□ 0.32
RPUSD4-208ENST00000533628 NUDCQ9Y266 331 aa17.05■□□□□ 0.32
RPUSD4-208ENST00000533628 TNS2Q63HR2 1409 aa17.04■□□□□ 0.32
RPUSD4-208ENST00000533628 SHANK3Q9BYB0 1731 aa17.04■□□□□ 0.32
RPUSD4-208ENST00000533628 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
RPUSD4-208ENST00000533628 DDB1Q16531 1140 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms