RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 PARP4Q9UKK3 1724 aaKnown RBP13.7□□□□□ -0.22
NUP98-220ENST00000533346 FYB1O15117 783 aa13.69□□□□□ -0.22
NUP98-220ENST00000533346 EVA1CP58658 441 aa13.69□□□□□ -0.22
NUP98-220ENST00000533346 ZRANB1Q9UGI0 708 aa13.69□□□□□ -0.22
NUP98-220ENST00000533346 AXIN2Q9Y2T1 843 aa13.69□□□□□ -0.22
NUP98-220ENST00000533346 CCDC9Q9Y3X0 531 aaKnown RBP13.69□□□□□ -0.22
NUP98-220ENST00000533346 WDR17Q8IZU2 1322 aa13.68□□□□□ -0.22
NUP98-220ENST00000533346 CARD14Q9BXL6 1004 aa13.68□□□□□ -0.22
NUP98-220ENST00000533346 WNK3Q9BYP7 1800 aa13.68□□□□□ -0.22
NUP98-220ENST00000533346 FAM98CQ17RN3 349 aaKnown RBP13.67□□□□□ -0.22
NUP98-220ENST00000533346 LARP1Q6PKG0 1096 aaKnown RBP13.67□□□□□ -0.22
NUP98-220ENST00000533346 KRT27Q7Z3Y8 459 aa13.67□□□□□ -0.22
NUP98-220ENST00000533346 TCP11L2Q8N4U5 519 aa13.67□□□□□ -0.22
NUP98-220ENST00000533346 COG3Q96JB2 828 aa13.67□□□□□ -0.22
NUP98-220ENST00000533346 STRN4Q9NRL3 753 aa13.67□□□□□ -0.22
NUP98-220ENST00000533346 BLMP54132 1417 aaPredicted RBP13.66□□□□□ -0.22
NUP98-220ENST00000533346 KIF24Q5T7B8 1368 aa13.66□□□□□ -0.22
NUP98-220ENST00000533346 FAM208AQ9UK61 1670 aaKnown RBP13.66□□□□□ -0.22
NUP98-220ENST00000533346 ANKRD26Q9UPS8 1709 aa13.65□□□□□ -0.22
NUP98-220ENST00000533346 CDCA7Q9BWT1 371 aaPredicted RBP13.65□□□□□ -0.22
NUP98-220ENST00000533346 CARD10Q9BWT7 1032 aa13.65□□□□□ -0.22
NUP98-220ENST00000533346 IP6K1Q92551 441 aa13.64□□□□□ -0.23
NUP98-220ENST00000533346 ERBB3P21860 1342 aa13.64□□□□□ -0.23
NUP98-220ENST00000533346 RTL1A6NKG5 1358 aa13.63□□□□□ -0.23
NUP98-220ENST00000533346 CCDC7Q96M83 1385 aa13.63□□□□□ -0.23
NUP98-220ENST00000533346 C11orf95C9JLR9 678 aaPredicted RBP13.63□□□□□ -0.23
NUP98-220ENST00000533346 DISP2A7MBM2 1401 aa13.63□□□□□ -0.23
NUP98-220ENST00000533346 NSD3Q9BZ95 1437 aa13.63□□□□□ -0.23
NUP98-220ENST00000533346 RGPD1P0DJD0 1748 aa13.61□□□□□ -0.23
NUP98-220ENST00000533346 TOM1L2Q6ZVM7 507 aa13.61□□□□□ -0.23
NUP98-220ENST00000533346 BCL9O00512 1426 aa13.61□□□□□ -0.23
NUP98-220ENST00000533346 PEAK1Q9H792 1746 aa13.61□□□□□ -0.23
NUP98-220ENST00000533346 CGNL1Q0VF96 1302 aa13.61□□□□□ -0.23
NUP98-220ENST00000533346 MAP3K19Q56UN5 1328 aa13.61□□□□□ -0.23
NUP98-220ENST00000533346 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
NUP98-220ENST00000533346 MAP2P11137 1827 aaKnown RBP13.6□□□□□ -0.23
NUP98-220ENST00000533346 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
NUP98-220ENST00000533346 NSD2O96028 1365 aa13.59□□□□□ -0.23
NUP98-220ENST00000533346 SOX12O15370 315 aa13.59□□□□□ -0.23
NUP98-220ENST00000533346 HOXC9P31274 260 aa13.59□□□□□ -0.23
NUP98-220ENST00000533346 FAM196AQ6ZSG2 479 aa13.59□□□□□ -0.23
NUP98-220ENST00000533346 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
NUP98-220ENST00000533346 KIF7Q2M1P5 1343 aa13.59□□□□□ -0.23
NUP98-220ENST00000533346 SBF2Q86WG5 1849 aa13.58□□□□□ -0.24
NUP98-220ENST00000533346 ZBTB7CA1YPR0 619 aa13.58□□□□□ -0.24
NUP98-220ENST00000533346 ANKRD24Q8TF21 1146 aa13.58□□□□□ -0.24
NUP98-220ENST00000533346 PANK3Q9H999 370 aa13.58□□□□□ -0.24
NUP98-220ENST00000533346 TNS1Q9HBL0 1735 aaKnown RBP13.58□□□□□ -0.24
NUP98-220ENST00000533346 PDE3BQ13370 1112 aa13.57□□□□□ -0.24
NUP98-220ENST00000533346 INSRP06213 1382 aa13.57□□□□□ -0.24
NUP98-220ENST00000533346 A0A0G2JS52 829 aa13.56□□□□□ -0.24
NUP98-220ENST00000533346 CSB-PGBD3P0DP91 1061 aa13.56□□□□□ -0.24
NUP98-220ENST00000533346 MYT1Q01538 1121 aa13.56□□□□□ -0.24
NUP98-220ENST00000533346 FLT4P35916 1363 aa13.56□□□□□ -0.24
NUP98-220ENST00000533346 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
NUP98-220ENST00000533346 PER1O15534 1290 aaPredicted RBP13.55□□□□□ -0.24
NUP98-220ENST00000533346 FBLN1P23142 703 aa13.55□□□□□ -0.24
NUP98-220ENST00000533346 AMPHP49418 695 aa13.55□□□□□ -0.24
NUP98-220ENST00000533346 DDB1Q16531 1140 aa13.55□□□□□ -0.24
NUP98-220ENST00000533346 WASHC2AQ641Q2 1341 aa13.54□□□□□ -0.24
NUP98-220ENST00000533346 OVOS2A0A0G2JMS6 1433 aa13.54□□□□□ -0.24
NUP98-220ENST00000533346 TNS2Q63HR2 1409 aa13.54□□□□□ -0.24
NUP98-220ENST00000533346 RGPD3A6NKT7 1758 aaPredicted RBP13.53□□□□□ -0.24
NUP98-220ENST00000533346 RGPD4Q7Z3J3 1758 aa13.53□□□□□ -0.24
NUP98-220ENST00000533346 EXOC5O00471 708 aa13.53□□□□□ -0.24
NUP98-220ENST00000533346 IL2RBP14784 551 aa13.53□□□□□ -0.24
NUP98-220ENST00000533346 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
NUP98-220ENST00000533346 NPC1L1Q9UHC9 1359 aa13.53□□□□□ -0.24
NUP98-220ENST00000533346 NCAPD2Q15021 1401 aa13.53□□□□□ -0.24
NUP98-220ENST00000533346 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
NUP98-220ENST00000533346 LRP5O75197 1615 aa13.53□□□□□ -0.24
NUP98-220ENST00000533346 SF3B2Q13435 895 aaKnown RBP13.52□□□□□ -0.25
NUP98-220ENST00000533346 AMER1Q5JTC6 1135 aaPredicted RBP13.52□□□□□ -0.25
NUP98-220ENST00000533346 DEFB132Q7Z7B7 95 aa13.52□□□□□ -0.25
NUP98-220ENST00000533346 NLRP2Q9NX02 1062 aa13.52□□□□□ -0.25
NUP98-220ENST00000533346 POLKQ9UBT6 870 aa13.52□□□□□ -0.25
NUP98-220ENST00000533346 PARD3Q8TEW0 1356 aa13.51□□□□□ -0.25
NUP98-220ENST00000533346 PLEKHG2Q9H7P9 1386 aa13.51□□□□□ -0.25
NUP98-220ENST00000533346 BAG6P46379 1132 aa13.51□□□□□ -0.25
NUP98-220ENST00000533346 MARCH10Q8NA82 808 aaPredicted RBP13.51□□□□□ -0.25
NUP98-220ENST00000533346 POLR3GLQ9BT43 218 aa13.51□□□□□ -0.25
NUP98-220ENST00000533346 KNSTRNQ9Y448 316 aa13.51□□□□□ -0.25
NUP98-220ENST00000533346 HSP90AB2PQ58FF8 381 aa13.5□□□□□ -0.25
NUP98-220ENST00000533346 FAM182BQ5T319 152 aa13.5□□□□□ -0.25
NUP98-220ENST00000533346 SHANK3Q9BYB0 1731 aa13.5□□□□□ -0.25
NUP98-220ENST00000533346 NBPF6Q5VWK0 638 aa13.49□□□□□ -0.25
NUP98-220ENST00000533346 NBPF4Q96M43 638 aa13.49□□□□□ -0.25
NUP98-220ENST00000533346 EMILIN1Q9Y6C2 1016 aa13.49□□□□□ -0.25
NUP98-220ENST00000533346 RREB1Q92766 1687 aa13.49□□□□□ -0.25
NUP98-220ENST00000533346 NHSQ6T4R5 1651 aa13.47□□□□□ -0.25
NUP98-220ENST00000533346 PLSCR1O15162 318 aa13.47□□□□□ -0.25
NUP98-220ENST00000533346 TRIM37O94972 964 aa13.47□□□□□ -0.25
NUP98-220ENST00000533346 CAMKK2Q96RR4 588 aa13.47□□□□□ -0.25
NUP98-220ENST00000533346 BCL11BQ9C0K0 894 aaPredicted RBP13.47□□□□□ -0.25
NUP98-220ENST00000533346 LTV1Q96GA3 475 aaPredicted RBP13.46□□□□□ -0.25
NUP98-220ENST00000533346 PKD1L3Q7Z443 1732 aa13.46□□□□□ -0.25
NUP98-220ENST00000533346 MEGF6O75095 1541 aa13.45□□□□□ -0.26
NUP98-220ENST00000533346 MORC1Q86VD1 984 aa13.45□□□□□ -0.26
NUP98-220ENST00000533346 APBA3O96018 575 aa13.44□□□□□ -0.26
NUP98-220ENST00000533346 EN1Q05925 392 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms