RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 PPP2R2DQ66LE6 453 aa8.83□□□□□ -1
C11orf54-212ENST00000533154 RETREG3Q86VR2 466 aa8.83□□□□□ -1
C11orf54-212ENST00000533154 TBC1D2Q9BYX2 928 aa8.83□□□□□ -1
C11orf54-212ENST00000533154 UNC93B1Q9H1C4 597 aa8.83□□□□□ -1
C11orf54-212ENST00000533154 ZBTB7CA1YPR0 619 aa8.82□□□□□ -1
C11orf54-212ENST00000533154 VARSP26640 1264 aaKnown RBP8.82□□□□□ -1
C11orf54-212ENST00000533154 TMEM259Q4ZIN3 620 aa8.82□□□□□ -1
C11orf54-212ENST00000533154 SVOPQ8N4V2 548 aa8.82□□□□□ -1
C11orf54-212ENST00000533154 GPR161Q8N6U8 529 aaKnown RBP8.82□□□□□ -1
C11orf54-212ENST00000533154 ZNF777Q9ULD5 760 aaPredicted RBP8.82□□□□□ -1
C11orf54-212ENST00000533154 ATP1B4Q9UN42 357 aaPredicted RBP8.82□□□□□ -1
C11orf54-212ENST00000533154 ZFAND3Q9H8U3 227 aa8.81□□□□□ -1
C11orf54-212ENST00000533154 ZIC2O95409 532 aaPredicted RBP8.8□□□□□ -1
C11orf54-212ENST00000533154 BMP2P12643 396 aa8.8□□□□□ -1
C11orf54-212ENST00000533154 ZNF385CQ66K41 422 aaPredicted RBP8.8□□□□□ -1
C11orf54-212ENST00000533154 ZNF511Q8NB15 262 aa8.8□□□□□ -1
C11orf54-212ENST00000533154 KLF16Q9BXK1 252 aaPredicted RBP8.8□□□□□ -1
C11orf54-212ENST00000533154 MPNDQ8N594 471 aa8.79□□□□□ -1
C11orf54-212ENST00000533154 TRAIPQ9BWF2 469 aa8.79□□□□□ -1
C11orf54-212ENST00000533154 COL25A1Q9BXS0 654 aaPredicted RBP8.78□□□□□ -1
C11orf54-212ENST00000533154 SNRKQ9NRH2 765 aa8.78□□□□□ -1
C11orf54-212ENST00000533154 LIMD1Q9UGP4 676 aa8.78□□□□□ -1
C11orf54-212ENST00000533154 C6orf229H3BNL8 230 aa8.77□□□□□ -1.01
C11orf54-212ENST00000533154 UPP2O95045 317 aa8.77□□□□□ -1.01
C11orf54-212ENST00000533154 GJA5P36382 358 aa8.77□□□□□ -1.01
C11orf54-212ENST00000533154 ARID5BQ14865 1188 aa8.77□□□□□ -1.01
C11orf54-212ENST00000533154 ITPKCQ96DU7 683 aa8.77□□□□□ -1.01
C11orf54-212ENST00000533154 SPTLC1O15269 473 aa8.76□□□□□ -1.01
C11orf54-212ENST00000533154 MARSP56192 900 aaKnown RBP8.76□□□□□ -1.01
C11orf54-212ENST00000533154 FOXK2Q01167 660 aa8.76□□□□□ -1.01
C11orf54-212ENST00000533154 RIC3Q7Z5B4 369 aa8.76□□□□□ -1.01
C11orf54-212ENST00000533154 SPIRE2Q8WWL2 714 aa8.76□□□□□ -1.01
C11orf54-212ENST00000533154 DNMT3LQ9UJW3 386 aa8.76□□□□□ -1.01
C11orf54-212ENST00000533154 PTPRNQ16849 979 aa8.75□□□□□ -1.01
C11orf54-212ENST00000533154 KANK3Q6NY19 840 aa8.75□□□□□ -1.01
C11orf54-212ENST00000533154 WWC1Q8IX03 1113 aa8.75□□□□□ -1.01
C11orf54-212ENST00000533154 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
C11orf54-212ENST00000533154 MTMR14Q8NCE2 650 aa8.75□□□□□ -1.01
C11orf54-212ENST00000533154 FAM174AQ8TBP5 190 aa8.75□□□□□ -1.01
C11orf54-212ENST00000533154 WHAMMQ8TF30 809 aa8.75□□□□□ -1.01
C11orf54-212ENST00000533154 EVA1BQ9NVM1 165 aa8.75□□□□□ -1.01
C11orf54-212ENST00000533154 ZNF330Q9Y3S2 320 aaPredicted RBP8.75□□□□□ -1.01
C11orf54-212ENST00000533154 CCDC9Q9Y3X0 531 aaKnown RBP8.75□□□□□ -1.01
C11orf54-212ENST00000533154 KCNH2Q12809 1159 aa8.74□□□□□ -1.01
C11orf54-212ENST00000533154 FBXO31Q5XUX0 539 aaPredicted RBP8.74□□□□□ -1.01
C11orf54-212ENST00000533154 RNFT1Q5M7Z0 435 aa8.73□□□□□ -1.01
C11orf54-212ENST00000533154 RSBN1LQ6PCB5 846 aaPredicted RBP8.73□□□□□ -1.01
C11orf54-212ENST00000533154 NUTM1Q86Y26 1132 aa8.73□□□□□ -1.01
C11orf54-212ENST00000533154 PRM3Q9NNZ6 103 aa8.73□□□□□ -1.01
C11orf54-212ENST00000533154 SOS2Q07890 1332 aaPredicted RBP8.73□□□□□ -1.01
C11orf54-212ENST00000533154 FDX1P10109 184 aa8.72□□□□□ -1.01
C11orf54-212ENST00000533154 NCAPD3P42695 1498 aa8.71□□□□□ -1.01
C11orf54-212ENST00000533154 ARHGEF15O94989 841 aa8.71□□□□□ -1.02
C11orf54-212ENST00000533154 NR3C2P08235 984 aa8.71□□□□□ -1.02
C11orf54-212ENST00000533154 NPM2Q86SE8 214 aaKnown RBP8.71□□□□□ -1.02
C11orf54-212ENST00000533154 PCDHGC3Q9UN70 934 aa8.71□□□□□ -1.02
C11orf54-212ENST00000533154 LILRB3O75022 631 aa8.7□□□□□ -1.02
C11orf54-212ENST00000533154 ADAM23O75077 832 aa8.7□□□□□ -1.02
C11orf54-212ENST00000533154 PPP1R15AO75807 674 aaPredicted RBP8.7□□□□□ -1.02
C11orf54-212ENST00000533154 PTSQ03393 145 aa8.7□□□□□ -1.02
C11orf54-212ENST00000533154 SCARF2Q96GP6 870 aaPredicted RBP8.7□□□□□ -1.02
C11orf54-212ENST00000533154 KRTAP4-8Q9BYQ9 185 aa8.7□□□□□ -1.02
C11orf54-212ENST00000533154 GDPD2Q9HCC8 539 aa8.7□□□□□ -1.02
C11orf54-212ENST00000533154 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.69□□□□□ -1.02
C11orf54-212ENST00000533154 MEIOBQ8N635 442 aa8.69□□□□□ -1.02
C11orf54-212ENST00000533154 CDK15Q96Q40 435 aa8.69□□□□□ -1.02
C11orf54-212ENST00000533154 CUX2O14529 1486 aa8.69□□□□□ -1.02
C11orf54-212ENST00000533154 MOXD2PA6NHM9 499 aa8.68□□□□□ -1.02
C11orf54-212ENST00000533154 NR5A1Q13285 461 aa8.68□□□□□ -1.02
C11orf54-212ENST00000533154 PRPF38BQ5VTL8 546 aaKnown RBP8.68□□□□□ -1.02
C11orf54-212ENST00000533154 FOXJ1Q92949 421 aa8.68□□□□□ -1.02
C11orf54-212ENST00000533154 ATAD2BQ9ULI0 1458 aa8.68□□□□□ -1.02
C11orf54-212ENST00000533154 MSTNO14793 375 aa8.67□□□□□ -1.02
C11orf54-212ENST00000533154 SLURP2P0DP57 97 aa8.67□□□□□ -1.02
C11orf54-212ENST00000533154 CTHP32929 405 aa8.67□□□□□ -1.02
C11orf54-212ENST00000533154 ERCC6Q03468 1493 aa8.66□□□□□ -1.02
C11orf54-212ENST00000533154 FIGNL2A6NMB9 653 aa8.66□□□□□ -1.02
C11orf54-212ENST00000533154 RETREG2Q8NC44 543 aa8.66□□□□□ -1.02
C11orf54-212ENST00000533154 PRR7Q8TB68 274 aa8.66□□□□□ -1.02
C11orf54-212ENST00000533154 NANOS1Q8WY41 292 aaKnown RBP8.66□□□□□ -1.02
C11orf54-212ENST00000533154 CDC14CA4D256 554 aa8.65□□□□□ -1.02
C11orf54-212ENST00000533154 TTLL8A6PVC2 850 aa8.65□□□□□ -1.02
C11orf54-212ENST00000533154 USP17L8P0C7I0 530 aa8.65□□□□□ -1.02
C11orf54-212ENST00000533154 QPCTQ16769 361 aa8.65□□□□□ -1.02
C11orf54-212ENST00000533154 CCDC155Q8N6L0 562 aa8.65□□□□□ -1.02
C11orf54-212ENST00000533154 GLMNQ92990 594 aa8.65□□□□□ -1.02
C11orf54-212ENST00000533154 CALR3Q96L12 384 aaKnown RBP8.65□□□□□ -1.02
C11orf54-212ENST00000533154 ABL2P42684 1182 aa8.64□□□□□ -1.03
C11orf54-212ENST00000533154 PDE4CQ08493 712 aa8.64□□□□□ -1.03
C11orf54-212ENST00000533154 AGERQ15109 404 aa8.64□□□□□ -1.03
C11orf54-212ENST00000533154 VWA5B2Q8N398 1253 aa8.64□□□□□ -1.03
C11orf54-212ENST00000533154 TSEN34Q9BSV6 310 aaKnown RBP8.64□□□□□ -1.03
C11orf54-212ENST00000533154 TBC1D2BQ9UPU7 963 aa8.64□□□□□ -1.03
C11orf54-212ENST00000533154 NESP48681 1621 aa8.64□□□□□ -1.03
C11orf54-212ENST00000533154 SMARCA4P51532 1647 aa8.63□□□□□ -1.03
C11orf54-212ENST00000533154 AP1G2O75843 785 aa8.63□□□□□ -1.03
C11orf54-212ENST00000533154 GRM5P41594 1212 aa8.63□□□□□ -1.03
C11orf54-212ENST00000533154 CSPP1Q1MSJ5 1256 aa8.63□□□□□ -1.03
C11orf54-212ENST00000533154 PLA2G4EQ3MJ16 856 aa8.63□□□□□ -1.03
C11orf54-212ENST00000533154 SPOCK3Q9BQ16 436 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms