RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 BCL9O00512 1426 aa16.49■□□□□ 0.23
TRAPPC4-213ENST00000533149 GPR162Q16538 588 aa16.48■□□□□ 0.23
TRAPPC4-213ENST00000533149 PTF1AQ7RTS3 328 aa16.48■□□□□ 0.23
TRAPPC4-213ENST00000533149 CDCA7Q9BWT1 371 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC4-213ENST00000533149 CCDC61Q9Y6R9 512 aa16.47■□□□□ 0.23
TRAPPC4-213ENST00000533149 LRRC37A3O60309 1634 aa16.47■□□□□ 0.23
TRAPPC4-213ENST00000533149 PLEKHG3A1L390 1219 aa16.45■□□□□ 0.22
TRAPPC4-213ENST00000533149 TOM1L2Q6ZVM7 507 aa16.45■□□□□ 0.22
TRAPPC4-213ENST00000533149 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
TRAPPC4-213ENST00000533149 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC4-213ENST00000533149 MARCH10Q8NA82 808 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC4-213ENST00000533149 AATKQ6ZMQ8 1374 aa16.44■□□□□ 0.22
TRAPPC4-213ENST00000533149 UTRNP46939 3433 aa16.44■□□□□ 0.22
TRAPPC4-213ENST00000533149 ZBTB7CA1YPR0 619 aa16.42■□□□□ 0.22
TRAPPC4-213ENST00000533149 STAC3Q96MF2 364 aa16.42■□□□□ 0.22
TRAPPC4-213ENST00000533149 BRD4O60885 1362 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC4-213ENST00000533149 KDM2AQ9Y2K7 1162 aa16.4■□□□□ 0.22
TRAPPC4-213ENST00000533149 TOPAZ1Q8N9V7 1692 aa16.39■□□□□ 0.21
TRAPPC4-213ENST00000533149 WDR17Q8IZU2 1322 aa16.39■□□□□ 0.21
TRAPPC4-213ENST00000533149 EXOC5O00471 708 aa16.39■□□□□ 0.21
TRAPPC4-213ENST00000533149 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
TRAPPC4-213ENST00000533149 DCAF11Q8TEB1 546 aa16.39■□□□□ 0.21
TRAPPC4-213ENST00000533149 AKAP12Q02952 1782 aa16.38■□□□□ 0.21
TRAPPC4-213ENST00000533149 PELP1Q8IZL8 1130 aaKnown RBP16.38■□□□□ 0.21
TRAPPC4-213ENST00000533149 ARHGEF28Q8N1W1 1705 aaKnown RBP16.37■□□□□ 0.21
TRAPPC4-213ENST00000533149 NLRP6P59044 892 aa16.37■□□□□ 0.21
TRAPPC4-213ENST00000533149 POLD1P28340 1107 aa16.36■□□□□ 0.21
TRAPPC4-213ENST00000533149 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
TRAPPC4-213ENST00000533149 SLC16A10Q8TF71 515 aa16.36■□□□□ 0.21
TRAPPC4-213ENST00000533149 CARD10Q9BWT7 1032 aa16.36■□□□□ 0.21
TRAPPC4-213ENST00000533149 GRIN3BO60391 1043 aa16.35■□□□□ 0.21
TRAPPC4-213ENST00000533149 SHANK3Q9BYB0 1731 aa16.34■□□□□ 0.21
TRAPPC4-213ENST00000533149 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
TRAPPC4-213ENST00000533149 CSB-PGBD3P0DP91 1061 aa16.34■□□□□ 0.21
TRAPPC4-213ENST00000533149 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
TRAPPC4-213ENST00000533149 PPIP5K1Q6PFW1 1433 aa16.33■□□□□ 0.21
TRAPPC4-213ENST00000533149 SLIT3O75094 1523 aa16.33■□□□□ 0.2
TRAPPC4-213ENST00000533149 SRPK2P78362 688 aaKnown RBP16.32■□□□□ 0.2
TRAPPC4-213ENST00000533149 RAB3GAP2Q9H2M9 1393 aa16.31■□□□□ 0.2
TRAPPC4-213ENST00000533149 ADRA2BP18089 450 aa16.31■□□□□ 0.2
TRAPPC4-213ENST00000533149 PAPPAQ13219 1627 aa16.31■□□□□ 0.2
TRAPPC4-213ENST00000533149 COL18A1P39060 1754 aa16.31■□□□□ 0.2
TRAPPC4-213ENST00000533149 CCDC7Q96M83 1385 aa16.3■□□□□ 0.2
TRAPPC4-213ENST00000533149 HSPA6P17066 643 aa16.3■□□□□ 0.2
TRAPPC4-213ENST00000533149 ZNF827Q17R98 1081 aa16.3■□□□□ 0.2
TRAPPC4-213ENST00000533149 CPSF1Q10570 1443 aaKnown RBP16.3■□□□□ 0.2
TRAPPC4-213ENST00000533149 TNS2Q63HR2 1409 aa16.3■□□□□ 0.2
TRAPPC4-213ENST00000533149 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
TRAPPC4-213ENST00000533149 ARHGEF25Q86VW2 580 aa16.29■□□□□ 0.2
TRAPPC4-213ENST00000533149 KCNH5Q8NCM2 988 aa16.29■□□□□ 0.2
TRAPPC4-213ENST00000533149 ACSBG1Q96GR2 724 aa16.29■□□□□ 0.2
TRAPPC4-213ENST00000533149 USP6P35125 1406 aa16.29■□□□□ 0.2
TRAPPC4-213ENST00000533149 CCER1Q8TC90 406 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC4-213ENST00000533149 GPBP1L1Q9HC44 474 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC4-213ENST00000533149 ATP10DQ9P241 1426 aa16.27■□□□□ 0.2
TRAPPC4-213ENST00000533149 NLGN2Q8NFZ4 835 aa16.27■□□□□ 0.2
TRAPPC4-213ENST00000533149 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
TRAPPC4-213ENST00000533149 CEP350Q5VT06 3117 aa16.27■□□□□ 0.19
TRAPPC4-213ENST00000533149 SLC27A3Q5K4L6 730 aa16.26■□□□□ 0.19
TRAPPC4-213ENST00000533149 CABP2Q9NPB3 220 aa16.26■□□□□ 0.19
TRAPPC4-213ENST00000533149 LRRC4BQ9NT99 713 aa16.26■□□□□ 0.19
TRAPPC4-213ENST00000533149 YBX3P16989 372 aaKnown RBP eCLIP16.25■□□□□ 0.19
TRAPPC4-213ENST00000533149 CABP1Q9NZU7 370 aa16.25■□□□□ 0.19
TRAPPC4-213ENST00000533149 TRPM1Q7Z4N2 1603 aa16.25■□□□□ 0.19
TRAPPC4-213ENST00000533149 ABCC6O95255 1503 aa16.24■□□□□ 0.19
TRAPPC4-213ENST00000533149 TFCP2L1Q9NZI6 479 aa16.24■□□□□ 0.19
TRAPPC4-213ENST00000533149 PNPLA7Q6ZV29 1317 aa16.24■□□□□ 0.19
TRAPPC4-213ENST00000533149 COL24A1Q17RW2 1714 aa16.24■□□□□ 0.19
TRAPPC4-213ENST00000533149 QSER1Q2KHR3 1735 aa16.23■□□□□ 0.19
TRAPPC4-213ENST00000533149 BTAF1O14981 1849 aa16.22■□□□□ 0.19
TRAPPC4-213ENST00000533149 PIK3C2AO00443 1686 aa16.22■□□□□ 0.19
TRAPPC4-213ENST00000533149 IL2RBP14784 551 aa16.21■□□□□ 0.19
TRAPPC4-213ENST00000533149 RGPD5Q99666 1765 aa16.21■□□□□ 0.19
TRAPPC4-213ENST00000533149 SOX12O15370 315 aa16.2■□□□□ 0.18
TRAPPC4-213ENST00000533149 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC4-213ENST00000533149 CENPJQ9HC77 1338 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC4-213ENST00000533149 QRICH2Q9H0J4 1663 aa16.19■□□□□ 0.18
TRAPPC4-213ENST00000533149 NLRP2Q9NX02 1062 aa16.19■□□□□ 0.18
TRAPPC4-213ENST00000533149 TTC21BQ7Z4L5 1316 aa16.18■□□□□ 0.18
TRAPPC4-213ENST00000533149 TTC21AQ8NDW8 1320 aa16.18■□□□□ 0.18
TRAPPC4-213ENST00000533149 ZNF526Q8TF50 670 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-213ENST00000533149 KIAA1210Q9ULL0 1709 aa16.17■□□□□ 0.18
TRAPPC4-213ENST00000533149 ADCY9O60503 1353 aa16.17■□□□□ 0.18
TRAPPC4-213ENST00000533149 CD2APQ9Y5K6 639 aa16.17■□□□□ 0.18
TRAPPC4-213ENST00000533149 ERBB3P21860 1342 aa16.16■□□□□ 0.18
TRAPPC4-213ENST00000533149 APLP1P51693 650 aa16.16■□□□□ 0.18
TRAPPC4-213ENST00000533149 NBPF1Q3BBV0 1214 aa16.15■□□□□ 0.18
TRAPPC4-213ENST00000533149 NFAT5O94916 1531 aa16.15■□□□□ 0.18
TRAPPC4-213ENST00000533149 GOLGB1Q14789 3259 aaKnown RBP16.14■□□□□ 0.17
TRAPPC4-213ENST00000533149 EVC2Q86UK5 1308 aa16.13■□□□□ 0.17
TRAPPC4-213ENST00000533149 KAT6BQ8WYB5 2073 aa16.13■□□□□ 0.17
TRAPPC4-213ENST00000533149 KCNQ4P56696 695 aa16.12■□□□□ 0.17
TRAPPC4-213ENST00000533149 DDX54Q8TDD1 881 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-213ENST00000533149 SYTL4Q96C24 671 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC4-213ENST00000533149 HMGB2P26583 209 aaKnown RBP16.11■□□□□ 0.17
TRAPPC4-213ENST00000533149 ZEB1P37275 1124 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC4-213ENST00000533149 COL23A1Q86Y22 540 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC4-213ENST00000533149 TUBGCP6Q96RT7 1819 aa16.11■□□□□ 0.17
TRAPPC4-213ENST00000533149 KIF3CO14782 793 aa16.1■□□□□ 0.17
TRAPPC4-213ENST00000533149 ANKRD24Q8TF21 1146 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms