RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 DDB1Q16531 1140 aa24.59■■□□□ 1.53
CTSB-226ENST00000532656 C11orf95C9JLR9 678 aaPredicted RBP24.58■■□□□ 1.53
CTSB-226ENST00000532656 SBF2Q86WG5 1849 aa24.58■■□□□ 1.53
CTSB-226ENST00000532656 WDR17Q8IZU2 1322 aa24.58■■□□□ 1.52
CTSB-226ENST00000532656 RGPD5Q99666 1765 aa24.57■■□□□ 1.52
CTSB-226ENST00000532656 ZNF692Q9BU19 519 aaPredicted RBP24.57■■□□□ 1.52
CTSB-226ENST00000532656 ARHGEF25Q86VW2 580 aa24.56■■□□□ 1.52
CTSB-226ENST00000532656 KCNH5Q8NCM2 988 aa24.55■■□□□ 1.52
CTSB-226ENST00000532656 TTC21AQ8NDW8 1320 aa24.54■■□□□ 1.52
CTSB-226ENST00000532656 RGPD3A6NKT7 1758 aaPredicted RBP24.53■■□□□ 1.52
CTSB-226ENST00000532656 RGPD4Q7Z3J3 1758 aa24.53■■□□□ 1.52
CTSB-226ENST00000532656 CSB-PGBD3P0DP91 1061 aa24.53■■□□□ 1.52
CTSB-226ENST00000532656 PTF1AQ7RTS3 328 aa24.53■■□□□ 1.52
CTSB-226ENST00000532656 KTN1Q86UP2 1357 aaKnown RBP24.53■■□□□ 1.52
CTSB-226ENST00000532656 NFAT5O94916 1531 aa24.52■■□□□ 1.52
CTSB-226ENST00000532656 MARCH10Q8NA82 808 aaPredicted RBP24.52■■□□□ 1.52
CTSB-226ENST00000532656 PLSCR1O15162 318 aa24.51■■□□□ 1.51
CTSB-226ENST00000532656 BCL11BQ9C0K0 894 aaPredicted RBP24.5■■□□□ 1.51
CTSB-226ENST00000532656 CDCA7Q9BWT1 371 aaPredicted RBP24.49■■□□□ 1.51
CTSB-226ENST00000532656 CARD10Q9BWT7 1032 aa24.49■■□□□ 1.51
CTSB-226ENST00000532656 SPON1Q9HCB6 807 aa24.49■■□□□ 1.51
CTSB-226ENST00000532656 MON2Q7Z3U7 1717 aa24.49■■□□□ 1.51
CTSB-226ENST00000532656 ANO8Q9HCE9 1232 aaPredicted RBP24.48■■□□□ 1.51
CTSB-226ENST00000532656 PPP1R1BQ9UD71 204 aaPredicted RBP24.48■■□□□ 1.51
CTSB-226ENST00000532656 KCNQ2O43526 872 aa24.47■■□□□ 1.51
CTSB-226ENST00000532656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.46■■□□□ 1.51
CTSB-226ENST00000532656 BCL9O00512 1426 aa24.45■■□□□ 1.51
CTSB-226ENST00000532656 ABCC6O95255 1503 aa24.44■■□□□ 1.5
CTSB-226ENST00000532656 CCDC7Q96M83 1385 aa24.43■■□□□ 1.5
CTSB-226ENST00000532656 SBNO2Q9Y2G9 1366 aa24.43■■□□□ 1.5
CTSB-226ENST00000532656 EXOC5O00471 708 aa24.43■■□□□ 1.5
CTSB-226ENST00000532656 PROM2Q8N271 834 aa24.43■■□□□ 1.5
CTSB-226ENST00000532656 NME9Q86XW9 330 aa24.42■■□□□ 1.5
CTSB-226ENST00000532656 CARD11Q9BXL7 1154 aa24.42■■□□□ 1.5
CTSB-226ENST00000532656 CD163L1Q9NR16 1453 aa24.42■■□□□ 1.5
CTSB-226ENST00000532656 CASZ1Q86V15 1759 aa24.42■■□□□ 1.5
CTSB-226ENST00000532656 TNS2Q63HR2 1409 aa24.41■■□□□ 1.5
CTSB-226ENST00000532656 USP31Q70CQ4 1352 aa24.41■■□□□ 1.5
CTSB-226ENST00000532656 USP54Q70EL1 1684 aa24.4■■□□□ 1.5
CTSB-226ENST00000532656 TMC1Q8TDI8 760 aa24.4■■□□□ 1.5
CTSB-226ENST00000532656 PDGFDQ9GZP0 370 aaPredicted RBP24.4■■□□□ 1.5
CTSB-226ENST00000532656 LTN1O94822 1766 aa24.39■■□□□ 1.5
CTSB-226ENST00000532656 TXNRD1Q16881 649 aa24.38■■□□□ 1.49
CTSB-226ENST00000532656 NINLQ9Y2I6 1382 aa24.38■■□□□ 1.49
CTSB-226ENST00000532656 ERBB3P21860 1342 aa24.37■■□□□ 1.49
CTSB-226ENST00000532656 NLRP2Q9NX02 1062 aa24.37■■□□□ 1.49
CTSB-226ENST00000532656 YY1P25490 414 aa24.36■■□□□ 1.49
CTSB-226ENST00000532656 HDGFL2Q7Z4V5 671 aaPredicted RBP24.36■■□□□ 1.49
CTSB-226ENST00000532656 SLC12A5Q9H2X9 1139 aa24.36■■□□□ 1.49
CTSB-226ENST00000532656 NHSQ6T4R5 1651 aa24.35■■□□□ 1.49
CTSB-226ENST00000532656 ZBTB7AO95365 584 aa24.35■■□□□ 1.49
CTSB-226ENST00000532656 ACSBG1Q96GR2 724 aa24.35■■□□□ 1.49
CTSB-226ENST00000532656 STK32BQ9NY57 414 aa24.34■■□□□ 1.49
CTSB-226ENST00000532656 EDC4Q6P2E9 1401 aaKnown RBP24.34■■□□□ 1.49
CTSB-226ENST00000532656 ANKRD24Q8TF21 1146 aa24.33■■□□□ 1.49
CTSB-226ENST00000532656 A0A1W2PP64 1363 aa24.32■■□□□ 1.48
CTSB-226ENST00000532656 TONSLQ96HA7 1378 aa24.31■■□□□ 1.48
CTSB-226ENST00000532656 MYOM1P52179 1685 aa24.31■■□□□ 1.48
CTSB-226ENST00000532656 DCAF8L1A6NGE4 600 aa24.31■■□□□ 1.48
CTSB-226ENST00000532656 IL2RBP14784 551 aa24.31■■□□□ 1.48
CTSB-226ENST00000532656 ATF5Q9Y2D1 282 aaPredicted RBP24.31■■□□□ 1.48
CTSB-226ENST00000532656 SLC15A2Q16348 729 aa24.3■■□□□ 1.48
CTSB-226ENST00000532656 TERF2IPQ9NYB0 399 aa24.3■■□□□ 1.48
CTSB-226ENST00000532656 PTGER2P43116 358 aa24.28■■□□□ 1.48
CTSB-226ENST00000532656 BTAF1O14981 1849 aa24.26■■□□□ 1.47
CTSB-226ENST00000532656 KAT6BQ8WYB5 2073 aa24.24■■□□□ 1.47
CTSB-226ENST00000532656 LTV1Q96GA3 475 aaPredicted RBP24.23■■□□□ 1.47
CTSB-226ENST00000532656 PUS7Q96PZ0 661 aaKnown RBP24.23■■□□□ 1.47
CTSB-226ENST00000532656 PAPPAQ13219 1627 aa24.23■■□□□ 1.47
CTSB-226ENST00000532656 IP6K1Q92551 441 aa24.22■■□□□ 1.47
CTSB-226ENST00000532656 MTFR1LQ9H019 292 aa24.22■■□□□ 1.47
CTSB-226ENST00000532656 TESK2Q96S53 571 aa24.21■■□□□ 1.47
CTSB-226ENST00000532656 FAM208AQ9UK61 1670 aaKnown RBP24.21■■□□□ 1.47
CTSB-226ENST00000532656 DDX54Q8TDD1 881 aaKnown RBP24.2■■□□□ 1.46
CTSB-226ENST00000532656 ST20-MTHFSA0A0A6YYL1 179 aa24.19■■□□□ 1.46
CTSB-226ENST00000532656 FHDC1Q9C0D6 1143 aaPredicted RBP24.19■■□□□ 1.46
CTSB-226ENST00000532656 UTRNP46939 3433 aa24.18■■□□□ 1.46
CTSB-226ENST00000532656 ZNF827Q17R98 1081 aa24.18■■□□□ 1.46
CTSB-226ENST00000532656 COG3Q96JB2 828 aa24.18■■□□□ 1.46
CTSB-226ENST00000532656 SGIP1Q9BQI5 828 aa24.18■■□□□ 1.46
CTSB-226ENST00000532656 LRRC4BQ9NT99 713 aa24.18■■□□□ 1.46
CTSB-226ENST00000532656 MAP3K19Q56UN5 1328 aa24.17■■□□□ 1.46
CTSB-226ENST00000532656 FBLN1P23142 703 aa24.17■■□□□ 1.46
CTSB-226ENST00000532656 SYT17Q9BSW7 474 aa24.17■■□□□ 1.46
CTSB-226ENST00000532656 HOXC9P31274 260 aa24.15■■□□□ 1.46
CTSB-226ENST00000532656 RGPD2P0DJD1 1756 aa24.14■■□□□ 1.46
CTSB-226ENST00000532656 AMPHP49418 695 aa24.14■■□□□ 1.45
CTSB-226ENST00000532656 DOT1LQ8TEK3 1739 aa24.13■■□□□ 1.45
CTSB-226ENST00000532656 SYTL4Q96C24 671 aaPredicted RBP24.12■■□□□ 1.45
CTSB-226ENST00000532656 ARXQ96QS3 562 aa24.12■■□□□ 1.45
CTSB-226ENST00000532656 ANKRD36BQ8N2N9 1353 aa24.11■■□□□ 1.45
CTSB-226ENST00000532656 SHANK3Q9BYB0 1731 aa24.1■■□□□ 1.45
CTSB-226ENST00000532656 AKT1S1Q96B36 256 aa24.1■■□□□ 1.45
CTSB-226ENST00000532656 MEGF6O75095 1541 aa24.1■■□□□ 1.45
CTSB-226ENST00000532656 PRIM1P49642 420 aaKnown RBP24.09■■□□□ 1.45
CTSB-226ENST00000532656 KCNQ4P56696 695 aa24.09■■□□□ 1.45
CTSB-226ENST00000532656 SLC27A3Q5K4L6 730 aa24.09■■□□□ 1.45
CTSB-226ENST00000532656 SLC24A1O60721 1099 aa24.08■■□□□ 1.45
CTSB-226ENST00000532656 RRS1Q15050 365 aaKnown RBP24.08■■□□□ 1.45
CTSB-226ENST00000532656 ZCRB1Q8TBF4 217 aaKnown RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms