RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 IVLP07476 585 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 CCDC158Q5M9N0 1113 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 RAB3IL1Q8TBN0 382 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 ZHX1Q9UKY1 873 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-231ENST00000532463 KIF5CO60282 957 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 PAFAH1B1P43034 410 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 EIF5P55010 431 aaKnown RBP9.53□□□□□ -0.88
CTNND1-231ENST00000532463 SPA17Q15506 151 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 DNAI2Q9GZS0 605 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 GOPCQ9HD26 462 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 STK26Q9P289 416 aa9.53□□□□□ -0.88
CTNND1-231ENST00000532463 SETD5Q9C0A6 1442 aa9.52□□□□□ -0.88
CTNND1-231ENST00000532463 WASHC4Q2M389 1173 aa9.52□□□□□ -0.88
CTNND1-231ENST00000532463 CEP120Q8N960 986 aa9.52□□□□□ -0.89
CTNND1-231ENST00000532463 UBE2Q2Q8WVN8 375 aa9.52□□□□□ -0.89
CTNND1-231ENST00000532463 TCHPQ9BT92 498 aa9.52□□□□□ -0.89
CTNND1-231ENST00000532463 BMP2KQ9NSY1 1161 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-231ENST00000532463 RBM28Q9NW13 759 aaKnown RBP9.52□□□□□ -0.89
CTNND1-231ENST00000532463 COMMD10Q9Y6G5 202 aa9.52□□□□□ -0.89
CTNND1-231ENST00000532463 GOLGA6L9A6NEM1 432 aa9.52□□□□□ -0.89
CTNND1-231ENST00000532463 DDX58O95786 925 aaKnown RBP9.52□□□□□ -0.89
CTNND1-231ENST00000532463 KIF5BP33176 963 aa9.52□□□□□ -0.89
CTNND1-231ENST00000532463 RNF168Q8IYW5 571 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-231ENST00000532463 NAA15Q9BXJ9 866 aaKnown RBP9.52□□□□□ -0.89
CTNND1-231ENST00000532463 CCDC83Q8IWF9 413 aa9.52□□□□□ -0.89
CTNND1-231ENST00000532463 SEPT10Q9P0V9 454 aa9.52□□□□□ -0.89
CTNND1-231ENST00000532463 LMAN1P49257 510 aa9.51□□□□□ -0.89
CTNND1-231ENST00000532463 KANK4Q5T7N3 995 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-231ENST00000532463 CEP112Q8N8E3 955 aa9.51□□□□□ -0.89
CTNND1-231ENST00000532463 CASQ1P31415 396 aa9.51□□□□□ -0.89
CTNND1-231ENST00000532463 AAMPQ13685 434 aa9.51□□□□□ -0.89
CTNND1-231ENST00000532463 NSRP1Q9H0G5 558 aaKnown RBP9.51□□□□□ -0.89
CTNND1-231ENST00000532463 ZHX3Q9H4I2 956 aa9.51□□□□□ -0.89
CTNND1-231ENST00000532463 CEP164Q9UPV0 1460 aa9.51□□□□□ -0.89
CTNND1-231ENST00000532463 UPF3BQ9BZI7 483 aaKnown RBP9.51□□□□□ -0.89
CTNND1-231ENST00000532463 KIF4BQ2VIQ3 1234 aa9.51□□□□□ -0.89
CTNND1-231ENST00000532463 MSL1Q68DK7 614 aa9.51□□□□□ -0.89
CTNND1-231ENST00000532463 TSNARE1Q96NA8 513 aa9.51□□□□□ -0.89
CTNND1-231ENST00000532463 LARP1Q6PKG0 1096 aaKnown RBP9.51□□□□□ -0.89
CTNND1-231ENST00000532463 DZIP1Q86YF9 867 aaKnown RBP9.51□□□□□ -0.89
CTNND1-231ENST00000532463 BCL2L13Q9BXK5 485 aa9.51□□□□□ -0.89
CTNND1-231ENST00000532463 PABPN1LA6NDY0 278 aaKnown RBP9.5□□□□□ -0.89
CTNND1-231ENST00000532463 SREK1Q8WXA9 508 aaKnown RBP9.5□□□□□ -0.89
CTNND1-231ENST00000532463 RSRC1Q96IZ7 334 aaKnown RBP9.5□□□□□ -0.89
CTNND1-231ENST00000532463 ZMYND15Q9H091 742 aa9.5□□□□□ -0.89
CTNND1-231ENST00000532463 PPM1FP49593 454 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-231ENST00000532463 KRT85P78386 507 aa9.5□□□□□ -0.89
CTNND1-231ENST00000532463 HMGB1P1B2RPK0 211 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-231ENST00000532463 ELL2O00472 640 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-231ENST00000532463 URI1O94763 535 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-231ENST00000532463 C1orf141Q5JVX7 400 aa9.5□□□□□ -0.89
CTNND1-231ENST00000532463 VPS36Q86VN1 386 aa9.5□□□□□ -0.89
CTNND1-231ENST00000532463 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
CTNND1-231ENST00000532463 TACC1O75410 805 aa9.5□□□□□ -0.89
CTNND1-231ENST00000532463 KIF4AO95239 1232 aa9.5□□□□□ -0.89
CTNND1-231ENST00000532463 SFPQP23246 707 aaKnown RBP eCLIP9.5□□□□□ -0.891e-8■■■□□ 15.1
CTNND1-231ENST00000532463 ME1P48163 572 aa9.5□□□□□ -0.89
CTNND1-231ENST00000532463 TPD52P55327 224 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-231ENST00000532463 MXRA7P84157 204 aa9.5□□□□□ -0.89
CTNND1-231ENST00000532463 CCDC178Q5BJE1 867 aa9.5□□□□□ -0.89
CTNND1-231ENST00000532463 SMC6Q96SB8 1091 aa9.5□□□□□ -0.89
CTNND1-231ENST00000532463 ROCK2O75116 1388 aaKnown RBP9.5□□□□□ -0.89
CTNND1-231ENST00000532463 SLC3A2P08195 630 aaKnown RBP9.49□□□□□ -0.89
CTNND1-231ENST00000532463 DDX12PQ92771 950 aa9.49□□□□□ -0.89
CTNND1-231ENST00000532463 A0A1B0GUA9 196 aa9.49□□□□□ -0.89
CTNND1-231ENST00000532463 TEFQ10587 303 aa9.49□□□□□ -0.89
CTNND1-231ENST00000532463 TTC5Q8N0Z6 440 aa9.49□□□□□ -0.89
CTNND1-231ENST00000532463 PPP1R14CQ8TAE6 165 aa9.49□□□□□ -0.89
CTNND1-231ENST00000532463 NUP133Q8WUM0 1156 aa9.49□□□□□ -0.89
CTNND1-231ENST00000532463 WDR33Q9C0J8 1336 aaKnown RBP9.49□□□□□ -0.89
CTNND1-231ENST00000532463 RAB3GAP2Q9H2M9 1393 aa9.49□□□□□ -0.89
CTNND1-231ENST00000532463 WRNQ14191 1432 aaPredicted RBP eCLIP9.49□□□□□ -0.89
CTNND1-231ENST00000532463 CNTROBQ8N137 903 aa9.49□□□□□ -0.89
CTNND1-231ENST00000532463 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-231ENST00000532463 MPNDQ8N594 471 aa9.49□□□□□ -0.89
CTNND1-231ENST00000532463 NOL7Q9UMY1 257 aaKnown RBP9.49□□□□□ -0.89
CTNND1-231ENST00000532463 ARID4AP29374 1257 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-231ENST00000532463 CCDC57Q2TAC2 916 aa9.48□□□□□ -0.89
CTNND1-231ENST00000532463 CCDC174Q6PII3 467 aa9.48□□□□□ -0.89
CTNND1-231ENST00000532463 CEBPZQ03701 1054 aaKnown RBP9.48□□□□□ -0.89
CTNND1-231ENST00000532463 SEPT14Q6ZU15 432 aa9.48□□□□□ -0.89
CTNND1-231ENST00000532463 HIP1O00291 1037 aa9.48□□□□□ -0.89
CTNND1-231ENST00000532463 CEP57Q86XR8 500 aa9.48□□□□□ -0.89
CTNND1-231ENST00000532463 TRIM22Q8IYM9 498 aa9.48□□□□□ -0.89
CTNND1-231ENST00000532463 GBP7Q8N8V2 638 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-231ENST00000532463 LUC7L2Q9Y383 392 aaKnown RBP9.48□□□□□ -0.89
CTNND1-231ENST00000532463 MAP4K4O95819 1239 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-231ENST00000532463 NEK4P51957 841 aa9.48□□□□□ -0.89
CTNND1-231ENST00000532463 MAP3K9P80192 1104 aa9.48□□□□□ -0.89
CTNND1-231ENST00000532463 PKD2Q13563 968 aa9.48□□□□□ -0.89
CTNND1-231ENST00000532463 HLTFQ14527 1009 aaKnown RBP eCLIP9.48□□□□□ -0.895e-6■□□□□ 9.8
CTNND1-231ENST00000532463 CFAP100Q494V2 611 aa9.48□□□□□ -0.89
CTNND1-231ENST00000532463 ZMAT2Q96NC0 199 aaKnown RBP9.48□□□□□ -0.89
CTNND1-231ENST00000532463 STIM2Q9P246 746 aa9.48□□□□□ -0.89
CTNND1-231ENST00000532463 MTMR7Q9Y216 660 aa9.48□□□□□ -0.89
CTNND1-231ENST00000532463 USO1O60763 962 aaKnown RBP9.47□□□□□ -0.89
CTNND1-231ENST00000532463 NBPF1Q3BBV0 1214 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 GBP6Q6ZN66 633 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 MAATS1Q7Z4T9 603 aa9.47□□□□□ -0.89
CTNND1-231ENST00000532463 STMN1P16949 149 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms