RNA–Protein interactions for RNA: ENST00000532197.1

NECTIN1-207, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 452 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-207ENST00000532197 SPATA31A1Q5TZJ5 1347 aa12.65□□□□□ -0.38
NECTIN1-207ENST00000532197 DISP2A7MBM2 1401 aa12.65□□□□□ -0.38
NECTIN1-207ENST00000532197 A0A0G2JS52 829 aa12.65□□□□□ -0.38
NECTIN1-207ENST00000532197 MYT1Q01538 1121 aa12.65□□□□□ -0.38
NECTIN1-207ENST00000532197 DEFB132Q7Z7B7 95 aa12.65□□□□□ -0.38
NECTIN1-207ENST00000532197 HSPA5P11021 654 aaKnown RBP12.64□□□□□ -0.39
NECTIN1-207ENST00000532197 EVA1CP58658 441 aa12.64□□□□□ -0.39
NECTIN1-207ENST00000532197 BARGINQ6ZT62 677 aa12.64□□□□□ -0.39
NECTIN1-207ENST00000532197 NME9Q86XW9 330 aa12.64□□□□□ -0.39
NECTIN1-207ENST00000532197 WNK3Q9BYP7 1800 aa12.64□□□□□ -0.39
NECTIN1-207ENST00000532197 PARP4Q9UKK3 1724 aaKnown RBP12.63□□□□□ -0.39
NECTIN1-207ENST00000532197 THRAP3Q9Y2W1 955 aaKnown RBP12.63□□□□□ -0.39
NECTIN1-207ENST00000532197 FAM208AQ9UK61 1670 aaKnown RBP12.63□□□□□ -0.39
NECTIN1-207ENST00000532197 CRB1P82279 1406 aa12.62□□□□□ -0.39
NECTIN1-207ENST00000532197 FAM196AQ6ZSG2 479 aa12.62□□□□□ -0.39
NECTIN1-207ENST00000532197 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
NECTIN1-207ENST00000532197 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
NECTIN1-207ENST00000532197 C11orf95C9JLR9 678 aaPredicted RBP12.61□□□□□ -0.39
NECTIN1-207ENST00000532197 COG3Q96JB2 828 aa12.61□□□□□ -0.39
NECTIN1-207ENST00000532197 WDR17Q8IZU2 1322 aa12.61□□□□□ -0.39
NECTIN1-207ENST00000532197 RGPD1P0DJD0 1748 aa12.6□□□□□ -0.39
NECTIN1-207ENST00000532197 PARD3Q8TEW0 1356 aa12.6□□□□□ -0.39
NECTIN1-207ENST00000532197 LARP1Q6PKG0 1096 aaKnown RBP12.6□□□□□ -0.39
NECTIN1-207ENST00000532197 SRCAPQ6ZRS2 3230 aa12.6□□□□□ -0.39
NECTIN1-207ENST00000532197 FYB1O15117 783 aa12.59□□□□□ -0.39
NECTIN1-207ENST00000532197 TCP11L2Q8N4U5 519 aa12.59□□□□□ -0.39
NECTIN1-207ENST00000532197 AXIN2Q9Y2T1 843 aa12.59□□□□□ -0.39
NECTIN1-207ENST00000532197 LRP5O75197 1615 aa12.59□□□□□ -0.39
NECTIN1-207ENST00000532197 ZBTB7CA1YPR0 619 aa12.58□□□□□ -0.4
NECTIN1-207ENST00000532197 SOX12O15370 315 aa12.58□□□□□ -0.4
NECTIN1-207ENST00000532197 NSD3Q9BZ95 1437 aa12.57□□□□□ -0.4
NECTIN1-207ENST00000532197 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
NECTIN1-207ENST00000532197 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
NECTIN1-207ENST00000532197 CARD14Q9BXL6 1004 aa12.57□□□□□ -0.4
NECTIN1-207ENST00000532197 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
NECTIN1-207ENST00000532197 CGNL1Q0VF96 1302 aa12.57□□□□□ -0.4
NECTIN1-207ENST00000532197 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
NECTIN1-207ENST00000532197 KIF24Q5T7B8 1368 aa12.56□□□□□ -0.4
NECTIN1-207ENST00000532197 EN1Q05925 392 aaPredicted RBP12.56□□□□□ -0.4
NECTIN1-207ENST00000532197 PDE3BQ13370 1112 aa12.56□□□□□ -0.4
NECTIN1-207ENST00000532197 TOM1L2Q6ZVM7 507 aa12.56□□□□□ -0.4
NECTIN1-207ENST00000532197 ERBB3P21860 1342 aa12.56□□□□□ -0.4
NECTIN1-207ENST00000532197 CCDC7Q96M83 1385 aa12.56□□□□□ -0.4
NECTIN1-207ENST00000532197 LRRC37A3O60309 1634 aa12.55□□□□□ -0.4
NECTIN1-207ENST00000532197 IP6K1Q92551 441 aa12.55□□□□□ -0.4
NECTIN1-207ENST00000532197 CAMKK2Q96RR4 588 aa12.55□□□□□ -0.4
NECTIN1-207ENST00000532197 USP35Q9P2H5 1018 aa12.55□□□□□ -0.4
NECTIN1-207ENST00000532197 TNS1Q9HBL0 1735 aaKnown RBP12.54□□□□□ -0.4
NECTIN1-207ENST00000532197 SBF2Q86WG5 1849 aa12.54□□□□□ -0.4
NECTIN1-207ENST00000532197 FAM182BQ5T319 152 aa12.54□□□□□ -0.4
NECTIN1-207ENST00000532197 GGNBP2Q9H3C7 697 aa12.54□□□□□ -0.4
NECTIN1-207ENST00000532197 MAP3K19Q56UN5 1328 aa12.54□□□□□ -0.4
NECTIN1-207ENST00000532197 TRIM37O94972 964 aa12.53□□□□□ -0.4
NECTIN1-207ENST00000532197 CSB-PGBD3P0DP91 1061 aa12.53□□□□□ -0.4
NECTIN1-207ENST00000532197 PEAK1Q9H792 1746 aa12.53□□□□□ -0.4
NECTIN1-207ENST00000532197 NSD2O96028 1365 aa12.53□□□□□ -0.4
NECTIN1-207ENST00000532197 RGPD2P0DJD1 1756 aa12.53□□□□□ -0.4
NECTIN1-207ENST00000532197 APBA3O96018 575 aa12.52□□□□□ -0.41
NECTIN1-207ENST00000532197 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
NECTIN1-207ENST00000532197 HOXC9P31274 260 aa12.51□□□□□ -0.41
NECTIN1-207ENST00000532197 AMPHP49418 695 aa12.51□□□□□ -0.41
NECTIN1-207ENST00000532197 EZH2Q15910 746 aaKnown RBP12.51□□□□□ -0.41
NECTIN1-207ENST00000532197 ANKRD24Q8TF21 1146 aa12.51□□□□□ -0.41
NECTIN1-207ENST00000532197 KIF7Q2M1P5 1343 aa12.51□□□□□ -0.41
NECTIN1-207ENST00000532197 BCL9O00512 1426 aa12.51□□□□□ -0.41
NECTIN1-207ENST00000532197 PSDA5PKW4 1024 aaPredicted RBP12.5□□□□□ -0.41
NECTIN1-207ENST00000532197 DDB1Q16531 1140 aa12.5□□□□□ -0.41
NECTIN1-207ENST00000532197 PANK3Q9H999 370 aa12.5□□□□□ -0.41
NECTIN1-207ENST00000532197 FLT4P35916 1363 aa12.5□□□□□ -0.41
NECTIN1-207ENST00000532197 OVOS2A0A0G2JMS6 1433 aa12.5□□□□□ -0.41
NECTIN1-207ENST00000532197 SMG6Q86US8 1419 aaKnown RBP12.49□□□□□ -0.41
NECTIN1-207ENST00000532197 INSRP06213 1382 aa12.49□□□□□ -0.41
NECTIN1-207ENST00000532197 R3HDM1Q15032 1099 aaKnown RBP12.49□□□□□ -0.41
NECTIN1-207ENST00000532197 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
NECTIN1-207ENST00000532197 RGPD3A6NKT7 1758 aaPredicted RBP12.48□□□□□ -0.41
NECTIN1-207ENST00000532197 RGPD4Q7Z3J3 1758 aa12.48□□□□□ -0.41
NECTIN1-207ENST00000532197 TNS2Q63HR2 1409 aa12.48□□□□□ -0.41
NECTIN1-207ENST00000532197 PLSCR1O15162 318 aa12.48□□□□□ -0.41
NECTIN1-207ENST00000532197 NBPF14Q5TI25 921 aa12.48□□□□□ -0.41
NECTIN1-207ENST00000532197 EXOC5O00471 708 aa12.47□□□□□ -0.41
NECTIN1-207ENST00000532197 FBLN1P23142 703 aa12.47□□□□□ -0.41
NECTIN1-207ENST00000532197 RRS1Q15050 365 aaKnown RBP12.47□□□□□ -0.41
NECTIN1-207ENST00000532197 KNSTRNQ9Y448 316 aa12.47□□□□□ -0.41
NECTIN1-207ENST00000532197 RREB1Q92766 1687 aa12.47□□□□□ -0.41
NECTIN1-207ENST00000532197 IL2RBP14784 551 aa12.46□□□□□ -0.41
NECTIN1-207ENST00000532197 WASHC2AQ641Q2 1341 aa12.45□□□□□ -0.42
NECTIN1-207ENST00000532197 BCL11BQ9C0K0 894 aaPredicted RBP12.45□□□□□ -0.42
NECTIN1-207ENST00000532197 KAT6BQ8WYB5 2073 aa12.45□□□□□ -0.42
NECTIN1-207ENST00000532197 SHANK3Q9BYB0 1731 aa12.44□□□□□ -0.42
NECTIN1-207ENST00000532197 NHSQ6T4R5 1651 aa12.44□□□□□ -0.42
NECTIN1-207ENST00000532197 NCAPD2Q15021 1401 aa12.44□□□□□ -0.42
NECTIN1-207ENST00000532197 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
NECTIN1-207ENST00000532197 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
NECTIN1-207ENST00000532197 HSP90AB2PQ58FF8 381 aa12.43□□□□□ -0.42
NECTIN1-207ENST00000532197 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
NECTIN1-207ENST00000532197 MARCH10Q8NA82 808 aaPredicted RBP12.43□□□□□ -0.42
NECTIN1-207ENST00000532197 LTV1Q96GA3 475 aaPredicted RBP12.43□□□□□ -0.42
NECTIN1-207ENST00000532197 POLKQ9UBT6 870 aa12.43□□□□□ -0.42
NECTIN1-207ENST00000532197 EMILIN1Q9Y6C2 1016 aa12.43□□□□□ -0.42
NECTIN1-207ENST00000532197 NUP188Q5SRE5 1749 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms