RNA–Protein interactions for RNA: ENST00000532181.5

SSH3-208, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-208ENST00000532181 SPATA31A1Q5TZJ5 1347 aa17.11■□□□□ 0.33
SSH3-208ENST00000532181 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
SSH3-208ENST00000532181 LARP1Q6PKG0 1096 aaKnown RBP17.1■□□□□ 0.33
SSH3-208ENST00000532181 OVOS2A0A0J9YW53 1432 aa17.1■□□□□ 0.33
SSH3-208ENST00000532181 OVOS2Q6IE36 1432 aa17.1■□□□□ 0.33
SSH3-208ENST00000532181 NFAT5O94916 1531 aa17.1■□□□□ 0.33
SSH3-208ENST00000532181 GGNBP2Q9H3C7 697 aa17.09■□□□□ 0.33
SSH3-208ENST00000532181 AXIN2Q9Y2T1 843 aa17.09■□□□□ 0.33
SSH3-208ENST00000532181 CPDO75976 1380 aa17.09■□□□□ 0.33
SSH3-208ENST00000532181 CCDC7Q96M83 1385 aa17.09■□□□□ 0.33
SSH3-208ENST00000532181 NSD3Q9BZ95 1437 aa17.09■□□□□ 0.33
SSH3-208ENST00000532181 LMO7Q8WWI1 1683 aa17.09■□□□□ 0.33
SSH3-208ENST00000532181 THSD7AQ9UPZ6 1657 aa17.09■□□□□ 0.33
SSH3-208ENST00000532181 ARHGEF25Q86VW2 580 aa17.08■□□□□ 0.32
SSH3-208ENST00000532181 USP54Q70EL1 1684 aa17.07■□□□□ 0.32
SSH3-208ENST00000532181 SF3B2Q13435 895 aaKnown RBP17.07■□□□□ 0.32
SSH3-208ENST00000532181 COL18A1P39060 1754 aa17.06■□□□□ 0.32
SSH3-208ENST00000532181 COL5A2P05997 1499 aaPredicted RBP17.04■□□□□ 0.32
SSH3-208ENST00000532181 PER1O15534 1290 aaPredicted RBP17.03■□□□□ 0.32
SSH3-208ENST00000532181 AATKQ6ZMQ8 1374 aa17.02■□□□□ 0.32
SSH3-208ENST00000532181 TCP11L2Q8N4U5 519 aa17.02■□□□□ 0.32
SSH3-208ENST00000532181 KCNH5Q8NCM2 988 aa17.02■□□□□ 0.32
SSH3-208ENST00000532181 RGPD5Q99666 1765 aa17.02■□□□□ 0.31
SSH3-208ENST00000532181 BARGINQ6ZT62 677 aa17.01■□□□□ 0.31
SSH3-208ENST00000532181 COG3Q96JB2 828 aa17.01■□□□□ 0.31
SSH3-208ENST00000532181 EN1Q05925 392 aaPredicted RBP17■□□□□ 0.31
SSH3-208ENST00000532181 MAP3K19Q56UN5 1328 aa16.99■□□□□ 0.31
SSH3-208ENST00000532181 TRIM37O94972 964 aa16.99■□□□□ 0.31
SSH3-208ENST00000532181 BAG6P46379 1132 aa16.99■□□□□ 0.31
SSH3-208ENST00000532181 RRS1Q15050 365 aaKnown RBP16.99■□□□□ 0.31
SSH3-208ENST00000532181 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
SSH3-208ENST00000532181 KIF20BQ96Q89 1820 aa16.98■□□□□ 0.31
SSH3-208ENST00000532181 CRB1P82279 1406 aa16.98■□□□□ 0.31
SSH3-208ENST00000532181 PDE3BQ13370 1112 aa16.98■□□□□ 0.31
SSH3-208ENST00000532181 AMER1Q5JTC6 1135 aaPredicted RBP16.98■□□□□ 0.31
SSH3-208ENST00000532181 TOM1L2Q6ZVM7 507 aa16.98■□□□□ 0.31
SSH3-208ENST00000532181 TNS1Q9HBL0 1735 aaKnown RBP16.97■□□□□ 0.31
SSH3-208ENST00000532181 CGNL1Q0VF96 1302 aa16.96■□□□□ 0.31
SSH3-208ENST00000532181 ZEB1P37275 1124 aaPredicted RBP16.96■□□□□ 0.31
SSH3-208ENST00000532181 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
SSH3-208ENST00000532181 THRAP3Q9Y2W1 955 aaKnown RBP16.96■□□□□ 0.31
SSH3-208ENST00000532181 PSDA5PKW4 1024 aaPredicted RBP16.95■□□□□ 0.3
SSH3-208ENST00000532181 CSB-PGBD3P0DP91 1061 aa16.95■□□□□ 0.3
SSH3-208ENST00000532181 EZH2Q15910 746 aaKnown RBP16.95■□□□□ 0.3
SSH3-208ENST00000532181 EMILIN1Q9Y6C2 1016 aa16.95■□□□□ 0.3
SSH3-208ENST00000532181 WDR17Q8IZU2 1322 aa16.95■□□□□ 0.3
SSH3-208ENST00000532181 LTN1O94822 1766 aa16.94■□□□□ 0.3
SSH3-208ENST00000532181 PEAK1Q9H792 1746 aa16.94■□□□□ 0.3
SSH3-208ENST00000532181 PARP4Q9UKK3 1724 aaKnown RBP16.94■□□□□ 0.3
SSH3-208ENST00000532181 IP6K1Q92551 441 aa16.94■□□□□ 0.3
SSH3-208ENST00000532181 HOXC9P31274 260 aa16.93■□□□□ 0.3
SSH3-208ENST00000532181 TNNT2P45379 298 aaPredicted RBP16.93■□□□□ 0.3
SSH3-208ENST00000532181 APBA3O96018 575 aa16.92■□□□□ 0.3
SSH3-208ENST00000532181 POLKQ9UBT6 870 aa16.92■□□□□ 0.3
SSH3-208ENST00000532181 KNSTRNQ9Y448 316 aa16.92■□□□□ 0.3
SSH3-208ENST00000532181 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
SSH3-208ENST00000532181 ANKRD24Q8TF21 1146 aa16.91■□□□□ 0.3
SSH3-208ENST00000532181 LRRC37A3O60309 1634 aa16.91■□□□□ 0.3
SSH3-208ENST00000532181 ERBB3P21860 1342 aa16.91■□□□□ 0.3
SSH3-208ENST00000532181 WNK3Q9BYP7 1800 aa16.91■□□□□ 0.3
SSH3-208ENST00000532181 DDB1Q16531 1140 aa16.9■□□□□ 0.3
SSH3-208ENST00000532181 LTV1Q96GA3 475 aaPredicted RBP16.9■□□□□ 0.3
SSH3-208ENST00000532181 CAMKK2Q96RR4 588 aa16.9■□□□□ 0.3
SSH3-208ENST00000532181 AMPHP49418 695 aa16.89■□□□□ 0.29
SSH3-208ENST00000532181 CNGB1Q14028 1251 aaPredicted RBP16.89■□□□□ 0.29
SSH3-208ENST00000532181 CC2D1BQ5T0F9 858 aaKnown RBP16.89■□□□□ 0.29
SSH3-208ENST00000532181 CARD10Q9BWT7 1032 aa16.89■□□□□ 0.29
SSH3-208ENST00000532181 ANKRD26Q9UPS8 1709 aa16.89■□□□□ 0.29
SSH3-208ENST00000532181 ABCC6O95255 1503 aa16.89■□□□□ 0.29
SSH3-208ENST00000532181 DISP2A7MBM2 1401 aa16.88■□□□□ 0.29
SSH3-208ENST00000532181 PTF1AQ7RTS3 328 aa16.88■□□□□ 0.29
SSH3-208ENST00000532181 R3HDM1Q15032 1099 aaKnown RBP16.87■□□□□ 0.29
SSH3-208ENST00000532181 MORC1Q86VD1 984 aa16.87■□□□□ 0.29
SSH3-208ENST00000532181 MARCH10Q8NA82 808 aaPredicted RBP16.87■□□□□ 0.29
SSH3-208ENST00000532181 NLRP2Q9NX02 1062 aa16.86■□□□□ 0.29
SSH3-208ENST00000532181 SBF2Q86WG5 1849 aa16.86■□□□□ 0.29
SSH3-208ENST00000532181 NSD2O96028 1365 aa16.86■□□□□ 0.29
SSH3-208ENST00000532181 MAP2P11137 1827 aaKnown RBP16.85■□□□□ 0.29
SSH3-208ENST00000532181 PPM1GO15355 546 aaPredicted RBP16.85■□□□□ 0.29
SSH3-208ENST00000532181 DDX10Q13206 875 aaKnown RBP16.85■□□□□ 0.29
SSH3-208ENST00000532181 NBPF6Q5VWK0 638 aa16.85■□□□□ 0.29
SSH3-208ENST00000532181 NBPF4Q96M43 638 aa16.85■□□□□ 0.29
SSH3-208ENST00000532181 OVOS2A0A0G2JMS6 1433 aa16.85■□□□□ 0.29
SSH3-208ENST00000532181 RTL1A6NKG5 1358 aa16.84■□□□□ 0.29
SSH3-208ENST00000532181 INSRP06213 1382 aa16.84■□□□□ 0.29
SSH3-208ENST00000532181 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
SSH3-208ENST00000532181 RGPD2P0DJD1 1756 aa16.84■□□□□ 0.29
SSH3-208ENST00000532181 FLT4P35916 1363 aa16.83■□□□□ 0.28
SSH3-208ENST00000532181 SRCAPQ6ZRS2 3230 aa16.83■□□□□ 0.28
SSH3-208ENST00000532181 USHBP1Q8N6Y0 703 aa16.83■□□□□ 0.28
SSH3-208ENST00000532181 EXOC5O00471 708 aa16.82■□□□□ 0.28
SSH3-208ENST00000532181 CDCA7Q9BWT1 371 aaPredicted RBP16.82■□□□□ 0.28
SSH3-208ENST00000532181 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
SSH3-208ENST00000532181 RREB1Q92766 1687 aa16.81■□□□□ 0.28
SSH3-208ENST00000532181 SMG6Q86US8 1419 aaKnown RBP16.81■□□□□ 0.28
SSH3-208ENST00000532181 FAM208AQ9UK61 1670 aaKnown RBP16.81■□□□□ 0.28
SSH3-208ENST00000532181 KIF24Q5T7B8 1368 aa16.8■□□□□ 0.28
SSH3-208ENST00000532181 EIF4A2Q14240 407 aaKnown RBP16.8■□□□□ 0.28
SSH3-208ENST00000532181 MTHFSP49914 203 aa16.79■□□□□ 0.28
SSH3-208ENST00000532181 EYA1Q99502 592 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms