RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 ANKRD26Q9UPS8 1709 aa28.52■■■□□ 2.16
CCS-207ENST00000531990 ABCC6O95255 1503 aa28.52■■■□□ 2.16
CCS-207ENST00000531990 NSD2O96028 1365 aa28.5■■■□□ 2.15
CCS-207ENST00000531990 CDK12Q9NYV4 1490 aaPredicted RBP28.49■■■□□ 2.15
CCS-207ENST00000531990 COL5A2P05997 1499 aaPredicted RBP28.48■■■□□ 2.15
CCS-207ENST00000531990 RGPD5Q99666 1765 aa28.48■■■□□ 2.15
CCS-207ENST00000531990 GLI3P10071 1580 aa28.47■■■□□ 2.15
CCS-207ENST00000531990 AXIN2Q9Y2T1 843 aa28.45■■■□□ 2.14
CCS-207ENST00000531990 SPATA31A5Q5VU36 1347 aa28.44■■■□□ 2.14
CCS-207ENST00000531990 SPATA31A7Q8IWB4 1347 aa28.44■■■□□ 2.14
CCS-207ENST00000531990 AMPHP49418 695 aa28.44■■■□□ 2.14
CCS-207ENST00000531990 MAP3K19Q56UN5 1328 aa28.43■■■□□ 2.14
CCS-207ENST00000531990 FBLN1P23142 703 aa28.43■■■□□ 2.14
CCS-207ENST00000531990 LARP1Q6PKG0 1096 aaKnown RBP28.43■■■□□ 2.14
CCS-207ENST00000531990 CSB-PGBD3P0DP91 1061 aa28.42■■■□□ 2.14
CCS-207ENST00000531990 IP6K1Q92551 441 aa28.42■■■□□ 2.14
CCS-207ENST00000531990 PER1O15534 1290 aaPredicted RBP28.41■■■□□ 2.14
CCS-207ENST00000531990 RRS1Q15050 365 aaKnown RBP28.41■■■□□ 2.14
CCS-207ENST00000531990 MORC1Q86VD1 984 aa28.41■■■□□ 2.14
CCS-207ENST00000531990 RGS12O14924 1447 aa28.41■■■□□ 2.14
CCS-207ENST00000531990 BLMP54132 1417 aaPredicted RBP28.41■■■□□ 2.14
CCS-207ENST00000531990 CRB1P82279 1406 aa28.41■■■□□ 2.14
CCS-207ENST00000531990 SPATA31A1Q5TZJ5 1347 aa28.41■■■□□ 2.14
CCS-207ENST00000531990 WDR17Q8IZU2 1322 aa28.41■■■□□ 2.14
CCS-207ENST00000531990 RTL1A6NKG5 1358 aa28.4■■■□□ 2.14
CCS-207ENST00000531990 AMER1Q5JTC6 1135 aaPredicted RBP28.39■■■□□ 2.14
CCS-207ENST00000531990 TOM1L2Q6ZVM7 507 aa28.39■■■□□ 2.14
CCS-207ENST00000531990 USP35Q9P2H5 1018 aa28.39■■■□□ 2.14
CCS-207ENST00000531990 MAP2P11137 1827 aaKnown RBP28.39■■■□□ 2.13
CCS-207ENST00000531990 KIF24Q5T7B8 1368 aa28.37■■■□□ 2.13
CCS-207ENST00000531990 A0A0G2JS52 829 aa28.37■■■□□ 2.13
CCS-207ENST00000531990 HOXC9P31274 260 aa28.37■■■□□ 2.13
CCS-207ENST00000531990 TNNT2P45379 298 aaPredicted RBP28.37■■■□□ 2.13
CCS-207ENST00000531990 MYT1Q01538 1121 aa28.37■■■□□ 2.13
CCS-207ENST00000531990 FAM98CQ17RN3 349 aaKnown RBP28.37■■■□□ 2.13
CCS-207ENST00000531990 ERBB3P21860 1342 aa28.36■■■□□ 2.13
CCS-207ENST00000531990 TCP11L2Q8N4U5 519 aa28.35■■■□□ 2.13
CCS-207ENST00000531990 ANKRD24Q8TF21 1146 aa28.35■■■□□ 2.13
CCS-207ENST00000531990 FLT4P35916 1363 aa28.35■■■□□ 2.13
CCS-207ENST00000531990 ONECUT3O60422 494 aaPredicted RBP28.34■■■□□ 2.13
CCS-207ENST00000531990 THRAP3Q9Y2W1 955 aaKnown RBP28.34■■■□□ 2.13
CCS-207ENST00000531990 NPC1L1Q9UHC9 1359 aa28.34■■■□□ 2.13
CCS-207ENST00000531990 PPM1GO15355 546 aaPredicted RBP28.33■■■□□ 2.13
CCS-207ENST00000531990 CC2D1BQ5T0F9 858 aaKnown RBP28.33■■■□□ 2.13
CCS-207ENST00000531990 SEPT12Q8IYM1 358 aa28.33■■■□□ 2.13
CCS-207ENST00000531990 EMILIN1Q9Y6C2 1016 aa28.33■■■□□ 2.13
CCS-207ENST00000531990 FAM208AQ9UK61 1670 aaKnown RBP28.32■■■□□ 2.12
CCS-207ENST00000531990 LTV1Q96GA3 475 aaPredicted RBP28.32■■■□□ 2.12
CCS-207ENST00000531990 PEAK1Q9H792 1746 aa28.32■■■□□ 2.12
CCS-207ENST00000531990 BARGINQ6ZT62 677 aa28.31■■■□□ 2.12
CCS-207ENST00000531990 CARD10Q9BWT7 1032 aa28.31■■■□□ 2.12
CCS-207ENST00000531990 NLRP2Q9NX02 1062 aa28.31■■■□□ 2.12
CCS-207ENST00000531990 SMG6Q86US8 1419 aaKnown RBP28.3■■■□□ 2.12
CCS-207ENST00000531990 POLKQ9UBT6 870 aa28.29■■■□□ 2.12
CCS-207ENST00000531990 THSD7AQ9UPZ6 1657 aa28.29■■■□□ 2.12
CCS-207ENST00000531990 INSRP06213 1382 aa28.28■■■□□ 2.12
CCS-207ENST00000531990 BRWD3Q6RI45 1802 aa28.28■■■□□ 2.12
CCS-207ENST00000531990 CNGB1Q14028 1251 aaPredicted RBP28.28■■■□□ 2.12
CCS-207ENST00000531990 HSP90AB2PQ58FF8 381 aa28.27■■■□□ 2.12
CCS-207ENST00000531990 DDX10Q13206 875 aaKnown RBP28.25■■■□□ 2.11
CCS-207ENST00000531990 WNK3Q9BYP7 1800 aa28.25■■■□□ 2.11
CCS-207ENST00000531990 CDCA7Q9BWT1 371 aaPredicted RBP28.23■■■□□ 2.11
CCS-207ENST00000531990 RGPD2P0DJD1 1756 aa28.22■■■□□ 2.11
CCS-207ENST00000531990 PARP4Q9UKK3 1724 aaKnown RBP28.21■■■□□ 2.11
CCS-207ENST00000531990 KRT27Q7Z3Y8 459 aa28.21■■■□□ 2.11
CCS-207ENST00000531990 ZNF316A6NFI3 1004 aaPredicted RBP28.2■■■□□ 2.1
CCS-207ENST00000531990 PDE3BQ13370 1112 aa28.18■■■□□ 2.1
CCS-207ENST00000531990 IL2RBP14784 551 aa28.16■■■□□ 2.1
CCS-207ENST00000531990 DDB1Q16531 1140 aa28.15■■■□□ 2.1
CCS-207ENST00000531990 NBPF6Q5VWK0 638 aa28.15■■■□□ 2.1
CCS-207ENST00000531990 NBPF4Q96M43 638 aa28.15■■■□□ 2.1
CCS-207ENST00000531990 DISP2A7MBM2 1401 aa28.15■■■□□ 2.1
CCS-207ENST00000531990 LRRC37A3O60309 1634 aa28.14■■■□□ 2.1
CCS-207ENST00000531990 MTHFSP49914 203 aa28.14■■■□□ 2.1
CCS-207ENST00000531990 EIF4A2Q14240 407 aaKnown RBP28.12■■■□□ 2.09
CCS-207ENST00000531990 EXOC5O00471 708 aa28.11■■■□□ 2.09
CCS-207ENST00000531990 USHBP1Q8N6Y0 703 aa28.1■■■□□ 2.09
CCS-207ENST00000531990 RAPGEF4Q8WZA2 1011 aa28.08■■■□□ 2.09
CCS-207ENST00000531990 EYA1Q99502 592 aa28.07■■■□□ 2.08
CCS-207ENST00000531990 TNS2Q63HR2 1409 aa28.07■■■□□ 2.08
CCS-207ENST00000531990 UPF1Q92900 1129 aaKnown RBP eCLIP28.06■■■□□ 2.08
CCS-207ENST00000531990 PPP2R1AP30153 589 aa28.05■■■□□ 2.08
CCS-207ENST00000531990 FAM182BQ5T319 152 aa28.05■■■□□ 2.08
CCS-207ENST00000531990 FAM196AQ6ZSG2 479 aa28.05■■■□□ 2.08
CCS-207ENST00000531990 PARD3Q8TEW0 1356 aa28.05■■■□□ 2.08
CCS-207ENST00000531990 TATP17735 454 aaPredicted RBP28.04■■■□□ 2.08
CCS-207ENST00000531990 CFAP53Q96M91 514 aa28.04■■■□□ 2.08
CCS-207ENST00000531990 MEGF6O75095 1541 aa28.02■■■□□ 2.08
CCS-207ENST00000531990 OVOS2A0A0G2JMS6 1433 aa28.02■■■□□ 2.08
CCS-207ENST00000531990 NCAPD2Q15021 1401 aa28.02■■■□□ 2.08
CCS-207ENST00000531990 RALBP1Q15311 655 aa28.02■■■□□ 2.08
CCS-207ENST00000531990 IGSF1Q8N6C5 1336 aa28.01■■■□□ 2.07
CCS-207ENST00000531990 DIAPH1O60610 1272 aaKnown RBP28.01■■■□□ 2.07
CCS-207ENST00000531990 CCDC125Q86Z20 511 aa28.01■■■□□ 2.07
CCS-207ENST00000531990 IL13P35225 146 aa28■■■□□ 2.07
CCS-207ENST00000531990 MARCH10Q8NA82 808 aaPredicted RBP27.99■■■□□ 2.07
CCS-207ENST00000531990 ZCRB1Q8TBF4 217 aaKnown RBP27.99■■■□□ 2.07
CCS-207ENST00000531990 RGPD1P0DJD0 1748 aa27.98■■■□□ 2.07
CCS-207ENST00000531990 SF3B2Q13435 895 aaKnown RBP27.97■■■□□ 2.07
CCS-207ENST00000531990 COL3A1P02461 1466 aaPredicted RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms