RNA–Protein interactions for RNA: ENST00000531668.1

CAPRIN1-210, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-210ENST00000531668 AXIN2Q9Y2T1 843 aa23.52■■□□□ 1.36
CAPRIN1-210ENST00000531668 OVOS2A0A0J9YW53 1432 aa23.51■■□□□ 1.35
CAPRIN1-210ENST00000531668 OVOS2Q6IE36 1432 aa23.51■■□□□ 1.35
CAPRIN1-210ENST00000531668 NFAT5O94916 1531 aa23.51■■□□□ 1.35
CAPRIN1-210ENST00000531668 TOM1L2Q6ZVM7 507 aa23.5■■□□□ 1.35
CAPRIN1-210ENST00000531668 LMO7Q8WWI1 1683 aa23.49■■□□□ 1.35
CAPRIN1-210ENST00000531668 CGNL1Q0VF96 1302 aa23.49■■□□□ 1.35
CAPRIN1-210ENST00000531668 SPATA31A1Q5TZJ5 1347 aa23.49■■□□□ 1.35
CAPRIN1-210ENST00000531668 KIF20BQ96Q89 1820 aa23.48■■□□□ 1.35
CAPRIN1-210ENST00000531668 COL5A2P05997 1499 aaPredicted RBP23.48■■□□□ 1.35
CAPRIN1-210ENST00000531668 USP54Q70EL1 1684 aa23.48■■□□□ 1.35
CAPRIN1-210ENST00000531668 AMPHP49418 695 aa23.47■■□□□ 1.35
CAPRIN1-210ENST00000531668 RGPD5Q99666 1765 aa23.47■■□□□ 1.35
CAPRIN1-210ENST00000531668 LTN1O94822 1766 aa23.46■■□□□ 1.35
CAPRIN1-210ENST00000531668 RRS1Q15050 365 aaKnown RBP23.46■■□□□ 1.35
CAPRIN1-210ENST00000531668 LTV1Q96GA3 475 aaPredicted RBP23.46■■□□□ 1.35
CAPRIN1-210ENST00000531668 COL18A1P39060 1754 aa23.45■■□□□ 1.34
CAPRIN1-210ENST00000531668 TCP11L2Q8N4U5 519 aa23.45■■□□□ 1.34
CAPRIN1-210ENST00000531668 TNNT2P45379 298 aaPredicted RBP23.44■■□□□ 1.34
CAPRIN1-210ENST00000531668 KNSTRNQ9Y448 316 aa23.44■■□□□ 1.34
CAPRIN1-210ENST00000531668 CCDC7Q96M83 1385 aa23.43■■□□□ 1.34
CAPRIN1-210ENST00000531668 MAP3K19Q56UN5 1328 aa23.43■■□□□ 1.34
CAPRIN1-210ENST00000531668 CRB1P82279 1406 aa23.42■■□□□ 1.34
CAPRIN1-210ENST00000531668 WASHC2AQ641Q2 1341 aa23.42■■□□□ 1.34
CAPRIN1-210ENST00000531668 WDR17Q8IZU2 1322 aa23.42■■□□□ 1.34
CAPRIN1-210ENST00000531668 ONECUT3O60422 494 aaPredicted RBP23.42■■□□□ 1.34
CAPRIN1-210ENST00000531668 NLRP2Q9NX02 1062 aa23.42■■□□□ 1.34
CAPRIN1-210ENST00000531668 PPM1GO15355 546 aaPredicted RBP23.41■■□□□ 1.34
CAPRIN1-210ENST00000531668 CNGB1Q14028 1251 aaPredicted RBP23.41■■□□□ 1.34
CAPRIN1-210ENST00000531668 KRT27Q7Z3Y8 459 aa23.41■■□□□ 1.34
CAPRIN1-210ENST00000531668 ANKRD24Q8TF21 1146 aa23.41■■□□□ 1.34
CAPRIN1-210ENST00000531668 IP6K1Q92551 441 aa23.4■■□□□ 1.34
CAPRIN1-210ENST00000531668 BRWD3Q6RI45 1802 aa23.4■■□□□ 1.34
CAPRIN1-210ENST00000531668 UPF1Q92900 1129 aaKnown RBP eCLIP23.39■■□□□ 1.33
CAPRIN1-210ENST00000531668 HOXC9P31274 260 aa23.38■■□□□ 1.33
CAPRIN1-210ENST00000531668 FAM182BQ5T319 152 aa23.38■■□□□ 1.33
CAPRIN1-210ENST00000531668 BARGINQ6ZT62 677 aa23.38■■□□□ 1.33
CAPRIN1-210ENST00000531668 ZEB1P37275 1124 aaPredicted RBP23.37■■□□□ 1.33
CAPRIN1-210ENST00000531668 THRAP3Q9Y2W1 955 aaKnown RBP23.37■■□□□ 1.33
CAPRIN1-210ENST00000531668 ERBB3P21860 1342 aa23.36■■□□□ 1.33
CAPRIN1-210ENST00000531668 MORC1Q86VD1 984 aa23.36■■□□□ 1.33
CAPRIN1-210ENST00000531668 PDE3BQ13370 1112 aa23.35■■□□□ 1.33
CAPRIN1-210ENST00000531668 CARD10Q9BWT7 1032 aa23.35■■□□□ 1.33
CAPRIN1-210ENST00000531668 EMILIN1Q9Y6C2 1016 aa23.35■■□□□ 1.33
CAPRIN1-210ENST00000531668 ABCC6O95255 1503 aa23.34■■□□□ 1.33
CAPRIN1-210ENST00000531668 BLMP54132 1417 aaPredicted RBP23.33■■□□□ 1.33
CAPRIN1-210ENST00000531668 HSP90AB2PQ58FF8 381 aa23.32■■□□□ 1.32
CAPRIN1-210ENST00000531668 CC2D1BQ5T0F9 858 aaKnown RBP23.32■■□□□ 1.32
CAPRIN1-210ENST00000531668 THSD7AQ9UPZ6 1657 aa23.32■■□□□ 1.32
CAPRIN1-210ENST00000531668 RTL1A6NKG5 1358 aa23.3■■□□□ 1.32
CAPRIN1-210ENST00000531668 NSD2O96028 1365 aa23.29■■□□□ 1.32
CAPRIN1-210ENST00000531668 DDB1Q16531 1140 aa23.29■■□□□ 1.32
CAPRIN1-210ENST00000531668 MAP2P11137 1827 aaKnown RBP23.29■■□□□ 1.32
CAPRIN1-210ENST00000531668 FLT4P35916 1363 aa23.28■■□□□ 1.32
CAPRIN1-210ENST00000531668 ANKRD26Q9UPS8 1709 aa23.28■■□□□ 1.32
CAPRIN1-210ENST00000531668 SMG6Q86US8 1419 aaKnown RBP23.27■■□□□ 1.32
CAPRIN1-210ENST00000531668 AMER1Q5JTC6 1135 aaPredicted RBP23.27■■□□□ 1.32
CAPRIN1-210ENST00000531668 POLKQ9UBT6 870 aa23.27■■□□□ 1.32
CAPRIN1-210ENST00000531668 PEAK1Q9H792 1746 aa23.26■■□□□ 1.31
CAPRIN1-210ENST00000531668 PER1O15534 1290 aaPredicted RBP23.26■■□□□ 1.31
CAPRIN1-210ENST00000531668 SF3B2Q13435 895 aaKnown RBP23.26■■□□□ 1.31
CAPRIN1-210ENST00000531668 USHBP1Q8N6Y0 703 aa23.26■■□□□ 1.31
CAPRIN1-210ENST00000531668 CDCA7Q9BWT1 371 aaPredicted RBP23.26■■□□□ 1.31
CAPRIN1-210ENST00000531668 EXOC5O00471 708 aa23.25■■□□□ 1.31
CAPRIN1-210ENST00000531668 IL2RBP14784 551 aa23.25■■□□□ 1.31
CAPRIN1-210ENST00000531668 INSRP06213 1382 aa23.24■■□□□ 1.31
CAPRIN1-210ENST00000531668 RGPD2P0DJD1 1756 aa23.23■■□□□ 1.31
CAPRIN1-210ENST00000531668 NBPF6Q5VWK0 638 aa23.23■■□□□ 1.31
CAPRIN1-210ENST00000531668 NBPF4Q96M43 638 aa23.23■■□□□ 1.31
CAPRIN1-210ENST00000531668 KIF24Q5T7B8 1368 aa23.23■■□□□ 1.31
CAPRIN1-210ENST00000531668 FAM196AQ6ZSG2 479 aa23.22■■□□□ 1.31
CAPRIN1-210ENST00000531668 PARP4Q9UKK3 1724 aaKnown RBP23.22■■□□□ 1.31
CAPRIN1-210ENST00000531668 WNK3Q9BYP7 1800 aa23.21■■□□□ 1.31
CAPRIN1-210ENST00000531668 TRIM37O94972 964 aa23.2■■□□□ 1.3
CAPRIN1-210ENST00000531668 CCDC125Q86Z20 511 aa23.2■■□□□ 1.3
CAPRIN1-210ENST00000531668 FAM208AQ9UK61 1670 aaKnown RBP23.19■■□□□ 1.3
CAPRIN1-210ENST00000531668 LRRC37A3O60309 1634 aa23.19■■□□□ 1.3
CAPRIN1-210ENST00000531668 DISP2A7MBM2 1401 aa23.19■■□□□ 1.3
CAPRIN1-210ENST00000531668 MARCH10Q8NA82 808 aaPredicted RBP23.17■■□□□ 1.3
CAPRIN1-210ENST00000531668 DDX54Q8TDD1 881 aaKnown RBP23.17■■□□□ 1.3
CAPRIN1-210ENST00000531668 RAPGEF4Q8WZA2 1011 aa23.17■■□□□ 1.3
CAPRIN1-210ENST00000531668 DEFB132Q7Z7B7 95 aa23.16■■□□□ 1.3
CAPRIN1-210ENST00000531668 DDX10Q13206 875 aaKnown RBP23.15■■□□□ 1.3
CAPRIN1-210ENST00000531668 EIF4A2Q14240 407 aaKnown RBP23.15■■□□□ 1.3
CAPRIN1-210ENST00000531668 TATP17735 454 aaPredicted RBP23.14■■□□□ 1.29
CAPRIN1-210ENST00000531668 MTHFSP49914 203 aa23.14■■□□□ 1.29
CAPRIN1-210ENST00000531668 OVOS2A0A0G2JMS6 1433 aa23.14■■□□□ 1.29
CAPRIN1-210ENST00000531668 EYA1Q99502 592 aa23.13■■□□□ 1.29
CAPRIN1-210ENST00000531668 BAG6P46379 1132 aa23.12■■□□□ 1.29
CAPRIN1-210ENST00000531668 TNS2Q63HR2 1409 aa23.12■■□□□ 1.29
CAPRIN1-210ENST00000531668 APBA3O96018 575 aa23.11■■□□□ 1.29
CAPRIN1-210ENST00000531668 ZCRB1Q8TBF4 217 aaKnown RBP23.11■■□□□ 1.29
CAPRIN1-210ENST00000531668 NPC1L1Q9UHC9 1359 aa23.11■■□□□ 1.29
CAPRIN1-210ENST00000531668 MEGF6O75095 1541 aa23.1■■□□□ 1.29
CAPRIN1-210ENST00000531668 ACSBG1Q96GR2 724 aa23.1■■□□□ 1.29
CAPRIN1-210ENST00000531668 KAT6BQ8WYB5 2073 aa23.09■■□□□ 1.29
CAPRIN1-210ENST00000531668 EN1Q05925 392 aaPredicted RBP23.09■■□□□ 1.29
CAPRIN1-210ENST00000531668 RGPD1P0DJD0 1748 aa23.08■■□□□ 1.28
CAPRIN1-210ENST00000531668 EP400Q96L91 3159 aa23.05■■□□□ 1.28
CAPRIN1-210ENST00000531668 PTF1AQ7RTS3 328 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms