RNA–Protein interactions for RNA: ENST00000531637.5

USP33-217, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 384 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-217ENST00000531637 NCOA4Q13772 614 aa9.8□□□□□ -0.84
USP33-217ENST00000531637 PTCRAQ6ISU1 281 aaPredicted RBP9.8□□□□□ -0.84
USP33-217ENST00000531637 ZNF511Q8NB15 262 aa9.8□□□□□ -0.84
USP33-217ENST00000531637 MKRN1Q9UHC7 482 aaKnown RBP9.8□□□□□ -0.84
USP33-217ENST00000531637 USP17L15C9J2P7 530 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 USP17L10C9JJH3 530 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 USP17L13C9JLJ4 530 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 USP17L12C9JPN9 530 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 USP17L11C9JVI0 530 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 USP17L21D6R901 530 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 USP17L18D6R9N7 530 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 USP17L22D6RA61 530 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 USP17L17D6RBQ6 530 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 USP17L19D6RCP7 530 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 USP17L20D6RJB6 530 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 ZBTB24O43167 697 aaPredicted RBP9.79□□□□□ -0.84
USP33-217ENST00000531637 ATP1A2P50993 1020 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 USP17L24Q0WX57 530 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 PHTF2Q8N3S3 785 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 BAP1Q92560 729 aa9.79□□□□□ -0.84
USP33-217ENST00000531637 TMEM88BA6NKF7 163 aa9.78□□□□□ -0.84
USP33-217ENST00000531637 RASA1P20936 1047 aa9.78□□□□□ -0.84
USP33-217ENST00000531637 TMCO4Q5TGY1 634 aa9.78□□□□□ -0.84
USP33-217ENST00000531637 DEPDC4Q8N2C3 294 aa9.78□□□□□ -0.84
USP33-217ENST00000531637 TRIM52Q96A61 297 aa9.78□□□□□ -0.84
USP33-217ENST00000531637 SIRT1Q96EB6 747 aa9.78□□□□□ -0.84
USP33-217ENST00000531637 CHIC2Q9UKJ5 165 aa9.78□□□□□ -0.84
USP33-217ENST00000531637 DOLKQ9UPQ8 538 aa9.78□□□□□ -0.84
USP33-217ENST00000531637 NOD1Q9Y239 953 aa9.78□□□□□ -0.84
USP33-217ENST00000531637 ERFEQ4G0M1 354 aa9.77□□□□□ -0.85
USP33-217ENST00000531637 HCSTQ9UBK5 93 aa9.77□□□□□ -0.85
USP33-217ENST00000531637 RANGAP1P46060 587 aaPredicted RBP9.76□□□□□ -0.85
USP33-217ENST00000531637 KCNC4Q03721 635 aa9.76□□□□□ -0.85
USP33-217ENST00000531637 LINC01559Q495D7 138 aa9.76□□□□□ -0.85
USP33-217ENST00000531637 POTEGQ6S5H5 508 aa9.76□□□□□ -0.85
USP33-217ENST00000531637 SEPT12Q8IYM1 358 aa9.76□□□□□ -0.85
USP33-217ENST00000531637 GZF1Q9H116 711 aaPredicted RBP9.76□□□□□ -0.85
USP33-217ENST00000531637 RBM19Q9Y4C8 960 aaKnown RBP9.76□□□□□ -0.85
USP33-217ENST00000531637 TRMT44Q8IYL2 757 aaKnown RBP9.75□□□□□ -0.85
USP33-217ENST00000531637 FAM200AQ8TCP9 573 aa9.75□□□□□ -0.85
USP33-217ENST00000531637 C1QTNF2Q9BXJ5 285 aa9.75□□□□□ -0.85
USP33-217ENST00000531637 ZMIZ1Q9ULJ6 1067 aa9.75□□□□□ -0.85
USP33-217ENST00000531637 TMEM164Q5U3C3 297 aa9.74□□□□□ -0.85
USP33-217ENST00000531637 TRAF7Q6Q0C0 670 aa9.74□□□□□ -0.85
USP33-217ENST00000531637 NKX2-3Q8TAU0 364 aa9.74□□□□□ -0.85
USP33-217ENST00000531637 CDCA7Q9BWT1 371 aaPredicted RBP9.74□□□□□ -0.85
USP33-217ENST00000531637 PCDH10Q9P2E7 1040 aa9.74□□□□□ -0.85
USP33-217ENST00000531637 ITGBL1O95965 494 aaPredicted RBP9.73□□□□□ -0.85
USP33-217ENST00000531637 PTK7Q13308 1070 aa9.73□□□□□ -0.85
USP33-217ENST00000531637 CRTC2Q53ET0 693 aaPredicted RBP9.73□□□□□ -0.85
USP33-217ENST00000531637 ANKMY2Q8IV38 441 aa9.73□□□□□ -0.85
USP33-217ENST00000531637 FOXJ1Q92949 421 aa9.73□□□□□ -0.85
USP33-217ENST00000531637 WNT7BP56706 349 aa9.72□□□□□ -0.85
USP33-217ENST00000531637 LARGE2Q8N3Y3 721 aa9.72□□□□□ -0.85
USP33-217ENST00000531637 OGFOD1Q8N543 542 aa9.72□□□□□ -0.85
USP33-217ENST00000531637 ANKLE1Q8NAG6 615 aa9.72□□□□□ -0.85
USP33-217ENST00000531637 STK32AQ8WU08 396 aa9.72□□□□□ -0.85
USP33-217ENST00000531637 DNAAF2Q9NVR5 837 aaKnown RBP9.72□□□□□ -0.85
USP33-217ENST00000531637 GIGYF1O75420 1035 aaPredicted RBP9.71□□□□□ -0.86
USP33-217ENST00000531637 SH3BP2P78314 561 aa9.71□□□□□ -0.86
USP33-217ENST00000531637 SWI5Q1ZZU3 235 aa9.71□□□□□ -0.86
USP33-217ENST00000531637 OXLD1Q5BKU9 147 aa9.71□□□□□ -0.86
USP33-217ENST00000531637 VARSP26640 1264 aaKnown RBP9.7□□□□□ -0.86
USP33-217ENST00000531637 TRIM32Q13049 653 aa9.7□□□□□ -0.86
USP33-217ENST00000531637 USP4Q13107 963 aa9.7□□□□□ -0.86
USP33-217ENST00000531637 CCER1Q8TC90 406 aaPredicted RBP9.7□□□□□ -0.86
USP33-217ENST00000531637 ESPNB1AK53 854 aa9.69□□□□□ -0.86
USP33-217ENST00000531637 C4orf48Q5BLP8 95 aa9.69□□□□□ -0.86
USP33-217ENST00000531637 CLP1Q92989 425 aaKnown RBP9.69□□□□□ -0.86
USP33-217ENST00000531637 CCDC85AQ96PX6 553 aaPredicted RBP9.69□□□□□ -0.86
USP33-217ENST00000531637 GNEQ9Y223 722 aaKnown RBP9.69□□□□□ -0.86
USP33-217ENST00000531637 MAP4K5Q9Y4K4 846 aa9.69□□□□□ -0.86
USP33-217ENST00000531637 IVNS1ABPQ9Y6Y0 642 aa9.69□□□□□ -0.86
USP33-217ENST00000531637 CARNS1A5YM72 827 aa9.68□□□□□ -0.86
USP33-217ENST00000531637 MYCP01106 439 aaPredicted RBP9.68□□□□□ -0.86
USP33-217ENST00000531637 RPIAP49247 311 aa9.68□□□□□ -0.86
USP33-217ENST00000531637 GTF2IP78347 998 aa9.68□□□□□ -0.86
USP33-217ENST00000531637 SIX5Q8N196 739 aa9.68□□□□□ -0.86
USP33-217ENST00000531637 RNF166Q96A37 237 aaPredicted RBP9.68□□□□□ -0.86
USP33-217ENST00000531637 ZNF594Q96JF6 807 aaPredicted RBP9.68□□□□□ -0.86
USP33-217ENST00000531637 PCDHB11Q9Y5F2 797 aa9.68□□□□□ -0.86
USP33-217ENST00000531637 RNF223E7ERA6 249 aa9.67□□□□□ -0.86
USP33-217ENST00000531637 DPYDQ12882 1025 aa9.67□□□□□ -0.86
USP33-217ENST00000531637 ESF1Q9H501 851 aaKnown RBP9.67□□□□□ -0.86
USP33-217ENST00000531637 MFAP1P55081 439 aaKnown RBP9.66□□□□□ -0.86
USP33-217ENST00000531637 CLDN10P78369 228 aa9.66□□□□□ -0.86
USP33-217ENST00000531637 PSME1Q06323 249 aa9.66□□□□□ -0.86
USP33-217ENST00000531637 NPM2Q86SE8 214 aaKnown RBP9.66□□□□□ -0.86
USP33-217ENST00000531637 KCTD15Q96SI1 283 aaPredicted RBP9.66□□□□□ -0.86
USP33-217ENST00000531637 MTMR7Q9Y216 660 aa9.66□□□□□ -0.86
USP33-217ENST00000531637 SEC13P55735 322 aa9.65□□□□□ -0.86
USP33-217ENST00000531637 SND1Q7KZF4 910 aaKnown RBP eCLIP9.65□□□□□ -0.86
USP33-217ENST00000531637 VASH1Q7L8A9 365 aaPredicted RBP9.65□□□□□ -0.86
USP33-217ENST00000531637 PPEF1O14829 653 aaPredicted RBP9.64□□□□□ -0.87
USP33-217ENST00000531637 CD2BP2O95400 341 aaKnown RBP9.64□□□□□ -0.87
USP33-217ENST00000531637 ARID4AP29374 1257 aaPredicted RBP9.64□□□□□ -0.87
USP33-217ENST00000531637 ATP2B4P23634 1241 aa9.63□□□□□ -0.87
USP33-217ENST00000531637 SSFA2P28290 1259 aa9.63□□□□□ -0.87
USP33-217ENST00000531637 DHX9Q08211 1270 aaKnown RBP9.63□□□□□ -0.87
USP33-217ENST00000531637 TSGA10IPQ3SY00 556 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms