RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 PPP1R26Q5T8A7 1209 aaPredicted RBP4.68□□□□□ -1.66
RC3H1-206ENST00000531594 TSC1Q92574 1164 aa4.68□□□□□ -1.66
RC3H1-206ENST00000531594 CUEDC1Q9NWM3 386 aaPredicted RBP4.68□□□□□ -1.66
RC3H1-206ENST00000531594 MAP4K5Q9Y4K4 846 aa4.68□□□□□ -1.66
RC3H1-206ENST00000531594 ADAMTS2O95450 1211 aa4.67□□□□□ -1.66
RC3H1-206ENST00000531594 AMHR2Q16671 573 aa4.67□□□□□ -1.66
RC3H1-206ENST00000531594 ERFEQ4G0M1 354 aa4.67□□□□□ -1.66
RC3H1-206ENST00000531594 Q6ZVU0 165 aa4.67□□□□□ -1.66
RC3H1-206ENST00000531594 TRMT44Q8IYL2 757 aaKnown RBP4.67□□□□□ -1.66
RC3H1-206ENST00000531594 INSM2Q96T92 566 aaPredicted RBP4.67□□□□□ -1.66
RC3H1-206ENST00000531594 ZBTB3Q9H5J0 574 aa4.67□□□□□ -1.66
RC3H1-206ENST00000531594 LIMD1Q9UGP4 676 aa4.67□□□□□ -1.66
RC3H1-206ENST00000531594 EMILIN1Q9Y6C2 1016 aa4.67□□□□□ -1.66
RC3H1-206ENST00000531594 MARSP56192 900 aaKnown RBP4.66□□□□□ -1.66
RC3H1-206ENST00000531594 PARP9Q8IXQ6 854 aa4.66□□□□□ -1.66
RC3H1-206ENST00000531594 ADAM23O75077 832 aa4.65□□□□□ -1.67
RC3H1-206ENST00000531594 CELA2BP08218 269 aaPredicted RBP4.65□□□□□ -1.67
RC3H1-206ENST00000531594 GJA5P36382 358 aa4.65□□□□□ -1.67
RC3H1-206ENST00000531594 HAP1P54257 671 aaPredicted RBP4.65□□□□□ -1.67
RC3H1-206ENST00000531594 RELBQ01201 579 aa4.65□□□□□ -1.67
RC3H1-206ENST00000531594 PLA2G4EQ3MJ16 856 aa4.65□□□□□ -1.67
RC3H1-206ENST00000531594 SV2AQ7L0J3 742 aa4.65□□□□□ -1.67
RC3H1-206ENST00000531594 RIC3Q7Z5B4 369 aa4.65□□□□□ -1.67
RC3H1-206ENST00000531594 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.67
RC3H1-206ENST00000531594 ZNF395Q9H8N7 513 aaPredicted RBP4.65□□□□□ -1.67
RC3H1-206ENST00000531594 CNTNAP5Q8WYK1 1306 aa4.65□□□□□ -1.67
RC3H1-206ENST00000531594 IGHA1P01876 353 aa4.64□□□□□ -1.67
RC3H1-206ENST00000531594 RTL5Q5HYW3 569 aaPredicted RBP4.64□□□□□ -1.67
RC3H1-206ENST00000531594 FOXD4L5Q5VV16 416 aaPredicted RBP4.64□□□□□ -1.67
RC3H1-206ENST00000531594 KANK3Q6NY19 840 aa4.64□□□□□ -1.67
RC3H1-206ENST00000531594 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.64□□□□□ -1.67
RC3H1-206ENST00000531594 RNF217Q8TC41 542 aa4.64□□□□□ -1.67
RC3H1-206ENST00000531594 SPOCK3Q9BQ16 436 aa4.64□□□□□ -1.67
RC3H1-206ENST00000531594 PROCP04070 461 aa4.63□□□□□ -1.67
RC3H1-206ENST00000531594 INTS6LQ5JSJ4 861 aaKnown RBP4.63□□□□□ -1.67
RC3H1-206ENST00000531594 PRPF38BQ5VTL8 546 aaKnown RBP4.63□□□□□ -1.67
RC3H1-206ENST00000531594 BARGINQ6ZT62 677 aa4.63□□□□□ -1.67
RC3H1-206ENST00000531594 DCAF5Q96JK2 942 aa4.63□□□□□ -1.67
RC3H1-206ENST00000531594 OCSTAMPQ9BR26 566 aa4.63□□□□□ -1.67
RC3H1-206ENST00000531594 POLMQ9NP87 494 aaPredicted RBP4.63□□□□□ -1.67
RC3H1-206ENST00000531594 TMPRSS4Q9NRS4 437 aa4.63□□□□□ -1.67
RC3H1-206ENST00000531594 GPR25O00155 361 aa4.62□□□□□ -1.67
RC3H1-206ENST00000531594 NBPF14Q5TI25 921 aa4.62□□□□□ -1.67
RC3H1-206ENST00000531594 MYSM1Q5VVJ2 828 aa4.62□□□□□ -1.67
RC3H1-206ENST00000531594 KDF1Q8NAX2 398 aaPredicted RBP4.62□□□□□ -1.67
RC3H1-206ENST00000531594 SCARF2Q96GP6 870 aaPredicted RBP4.62□□□□□ -1.67
RC3H1-206ENST00000531594 KCTD15Q96SI1 283 aaPredicted RBP4.62□□□□□ -1.67
RC3H1-206ENST00000531594 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
RC3H1-206ENST00000531594 TULP1O00294 542 aaPredicted RBP4.61□□□□□ -1.67
RC3H1-206ENST00000531594 MSTNO14793 375 aa4.61□□□□□ -1.67
RC3H1-206ENST00000531594 LILRB3O75022 631 aa4.61□□□□□ -1.67
RC3H1-206ENST00000531594 ZMYND10O75800 440 aa4.61□□□□□ -1.67
RC3H1-206ENST00000531594 FOXK2Q01167 660 aa4.61□□□□□ -1.67
RC3H1-206ENST00000531594 SRSF11Q05519 484 aaKnown RBP4.61□□□□□ -1.67
RC3H1-206ENST00000531594 FBXO31Q5XUX0 539 aaPredicted RBP4.61□□□□□ -1.67
RC3H1-206ENST00000531594 PGPEP1Q9NXJ5 209 aa4.61□□□□□ -1.67
RC3H1-206ENST00000531594 NUTM2BA6NNL0 878 aaPredicted RBP4.6□□□□□ -1.67
RC3H1-206ENST00000531594 NUTM2EB1AL46 878 aaPredicted RBP4.6□□□□□ -1.67
RC3H1-206ENST00000531594 RHOQP17081 205 aa4.6□□□□□ -1.67
RC3H1-206ENST00000531594 ADD1P35611 737 aaKnown RBP4.6□□□□□ -1.67
RC3H1-206ENST00000531594 NUTM2DQ5VT03 806 aaPredicted RBP4.6□□□□□ -1.67
RC3H1-206ENST00000531594 NUTM2AQ8IVF1 878 aaPredicted RBP4.6□□□□□ -1.67
RC3H1-206ENST00000531594 TRIM66O15016 1216 aa4.59□□□□□ -1.67
RC3H1-206ENST00000531594 RAB15P59190 212 aa4.59□□□□□ -1.67
RC3H1-206ENST00000531594 MAP3K10Q02779 954 aa4.59□□□□□ -1.67
RC3H1-206ENST00000531594 CTDSPL2Q05D32 466 aa4.59□□□□□ -1.67
RC3H1-206ENST00000531594 ZNF784Q8NCA9 323 aaPredicted RBP4.59□□□□□ -1.67
RC3H1-206ENST00000531594 ARMC2Q8NEN0 867 aa4.59□□□□□ -1.67
RC3H1-206ENST00000531594 ZC3H15Q8WU90 426 aaKnown RBP4.59□□□□□ -1.67
RC3H1-206ENST00000531594 LRRN4Q8WUT4 740 aa4.59□□□□□ -1.67
RC3H1-206ENST00000531594 ZNF837Q96EG3 531 aaPredicted RBP4.59□□□□□ -1.67
RC3H1-206ENST00000531594 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.67
RC3H1-206ENST00000531594 LILRA1O75019 489 aa4.58□□□□□ -1.68
RC3H1-206ENST00000531594 ACDQ96AP0 544 aa4.58□□□□□ -1.68
RC3H1-206ENST00000531594 SLC10A4Q96EP9 437 aa4.58□□□□□ -1.68
RC3H1-206ENST00000531594 ARHGAP9Q9BRR9 750 aa4.58□□□□□ -1.68
RC3H1-206ENST00000531594 IGF1RP08069 1367 aa4.57□□□□□ -1.68
RC3H1-206ENST00000531594 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
RC3H1-206ENST00000531594 DIXDC1Q155Q3 683 aa4.57□□□□□ -1.68
RC3H1-206ENST00000531594 PRICKLE2Q7Z3G6 844 aa4.57□□□□□ -1.68
RC3H1-206ENST00000531594 ADH1AP07327 375 aa4.56□□□□□ -1.68
RC3H1-206ENST00000531594 SNRPNP63162 240 aaKnown RBP4.56□□□□□ -1.68
RC3H1-206ENST00000531594 NR6A1Q15406 480 aa4.56□□□□□ -1.68
RC3H1-206ENST00000531594 DBN1Q16643 649 aa4.56□□□□□ -1.68
RC3H1-206ENST00000531594 PDXDC2PQ6P474 469 aa4.56□□□□□ -1.68
RC3H1-206ENST00000531594 Q8N3U1 123 aa4.56□□□□□ -1.68
RC3H1-206ENST00000531594 HELBQ8NG08 1087 aaPredicted RBP4.56□□□□□ -1.68
RC3H1-206ENST00000531594 MBIPQ9NS73 344 aa4.56□□□□□ -1.68
RC3H1-206ENST00000531594 KRBA1A5PL33 1030 aa4.55□□□□□ -1.68
RC3H1-206ENST00000531594 ERVH48-1M5A8F1 160 aa4.55□□□□□ -1.68
RC3H1-206ENST00000531594 LYSMD3Q7Z3D4 306 aa4.55□□□□□ -1.68
RC3H1-206ENST00000531594 GALNT6Q8NCL4 622 aa4.55□□□□□ -1.68
RC3H1-206ENST00000531594 NEDD1Q8NHV4 660 aa4.55□□□□□ -1.68
RC3H1-206ENST00000531594 ADAM32Q8TC27 787 aa4.55□□□□□ -1.68
RC3H1-206ENST00000531594 EPS8L1Q8TE68 723 aa4.55□□□□□ -1.68
RC3H1-206ENST00000531594 GPKOWQ92917 476 aaPredicted RBP eCLIP4.55□□□□□ -1.68
RC3H1-206ENST00000531594 FKBPLQ9UIM3 349 aa4.55□□□□□ -1.68
RC3H1-206ENST00000531594 K7ELQ4 463 aaPredicted RBP4.54□□□□□ -1.68
RC3H1-206ENST00000531594 FURINP09958 794 aa4.54□□□□□ -1.68
RC3H1-206ENST00000531594 BCRP11274 1271 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms