RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 NINLQ9Y2I6 1382 aa18.48■□□□□ 0.55
SF3B2-212ENST00000531589 CSB-PGBD3P0DP91 1061 aa18.48■□□□□ 0.55
SF3B2-212ENST00000531589 AXIN2Q9Y2T1 843 aa18.48■□□□□ 0.55
SF3B2-212ENST00000531589 TIMELESSQ9UNS1 1208 aa18.47■□□□□ 0.55
SF3B2-212ENST00000531589 EDC4Q6P2E9 1401 aaKnown RBP18.47■□□□□ 0.55
SF3B2-212ENST00000531589 CD163L1Q9NR16 1453 aa18.46■□□□□ 0.55
SF3B2-212ENST00000531589 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
SF3B2-212ENST00000531589 PARD3Q8TEW0 1356 aa18.46■□□□□ 0.55
SF3B2-212ENST00000531589 APBA3O96018 575 aa18.46■□□□□ 0.55
SF3B2-212ENST00000531589 DDB1Q16531 1140 aa18.46■□□□□ 0.55
SF3B2-212ENST00000531589 TESK2Q96S53 571 aa18.46■□□□□ 0.55
SF3B2-212ENST00000531589 NME9Q86XW9 330 aa18.45■□□□□ 0.54
SF3B2-212ENST00000531589 CARD10Q9BWT7 1032 aa18.45■□□□□ 0.54
SF3B2-212ENST00000531589 COL18A1P39060 1754 aa18.45■□□□□ 0.54
SF3B2-212ENST00000531589 EZH2Q15910 746 aaKnown RBP18.44■□□□□ 0.54
SF3B2-212ENST00000531589 CLSPNQ9HAW4 1339 aa18.44■□□□□ 0.54
SF3B2-212ENST00000531589 ABCC6O95255 1503 aa18.44■□□□□ 0.54
SF3B2-212ENST00000531589 A0A1W2PP64 1363 aa18.43■□□□□ 0.54
SF3B2-212ENST00000531589 PARP4Q9UKK3 1724 aaKnown RBP18.43■□□□□ 0.54
SF3B2-212ENST00000531589 TMF1P82094 1093 aa18.43■□□□□ 0.54
SF3B2-212ENST00000531589 CAMKK2Q96RR4 588 aa18.43■□□□□ 0.54
SF3B2-212ENST00000531589 NFAT5O94916 1531 aa18.43■□□□□ 0.54
SF3B2-212ENST00000531589 CCDC7Q96M83 1385 aa18.42■□□□□ 0.54
SF3B2-212ENST00000531589 OVOS2A0A0G2JMS6 1433 aa18.42■□□□□ 0.54
SF3B2-212ENST00000531589 OVOS2A0A0J9YW53 1432 aa18.42■□□□□ 0.54
SF3B2-212ENST00000531589 OVOS2Q6IE36 1432 aa18.42■□□□□ 0.54
SF3B2-212ENST00000531589 TNS1Q9HBL0 1735 aaKnown RBP18.41■□□□□ 0.54
SF3B2-212ENST00000531589 PSDA5PKW4 1024 aaPredicted RBP18.4■□□□□ 0.54
SF3B2-212ENST00000531589 CDCA8Q53HL2 280 aa18.4■□□□□ 0.54
SF3B2-212ENST00000531589 USP47Q96K76 1375 aa18.4■□□□□ 0.54
SF3B2-212ENST00000531589 USP54Q70EL1 1684 aa18.39■□□□□ 0.53
SF3B2-212ENST00000531589 EXOC5O00471 708 aa18.39■□□□□ 0.53
SF3B2-212ENST00000531589 PCGF6Q9BYE7 350 aa18.39■□□□□ 0.53
SF3B2-212ENST00000531589 COG3Q96JB2 828 aa18.38■□□□□ 0.53
SF3B2-212ENST00000531589 R3HDM1Q15032 1099 aaKnown RBP18.37■□□□□ 0.53
SF3B2-212ENST00000531589 NBPF14Q5TI25 921 aa18.37■□□□□ 0.53
SF3B2-212ENST00000531589 NLRP2Q9NX02 1062 aa18.37■□□□□ 0.53
SF3B2-212ENST00000531589 ERBB3P21860 1342 aa18.37■□□□□ 0.53
SF3B2-212ENST00000531589 LRRC37A3O60309 1634 aa18.36■□□□□ 0.53
SF3B2-212ENST00000531589 ANKRD36BQ8N2N9 1353 aa18.36■□□□□ 0.53
SF3B2-212ENST00000531589 ANKRD24Q8TF21 1146 aa18.35■□□□□ 0.53
SF3B2-212ENST00000531589 BCL11BQ9C0K0 894 aaPredicted RBP18.35■□□□□ 0.53
SF3B2-212ENST00000531589 SRCAPQ6ZRS2 3230 aa18.34■□□□□ 0.53
SF3B2-212ENST00000531589 BCL9O00512 1426 aa18.34■□□□□ 0.53
SF3B2-212ENST00000531589 PLSCR1O15162 318 aa18.34■□□□□ 0.53
SF3B2-212ENST00000531589 MARCH10Q8NA82 808 aaPredicted RBP18.34■□□□□ 0.53
SF3B2-212ENST00000531589 IP6K1Q92551 441 aa18.34■□□□□ 0.53
SF3B2-212ENST00000531589 RGPD5Q99666 1765 aa18.34■□□□□ 0.53
SF3B2-212ENST00000531589 PEAK1Q9H792 1746 aa18.32■□□□□ 0.52
SF3B2-212ENST00000531589 IL2RBP14784 551 aa18.32■□□□□ 0.52
SF3B2-212ENST00000531589 LRP5O75197 1615 aa18.31■□□□□ 0.52
SF3B2-212ENST00000531589 WNK3Q9BYP7 1800 aa18.31■□□□□ 0.52
SF3B2-212ENST00000531589 LTN1O94822 1766 aa18.31■□□□□ 0.52
SF3B2-212ENST00000531589 TNS2Q63HR2 1409 aa18.3■□□□□ 0.52
SF3B2-212ENST00000531589 AMPHP49418 695 aa18.29■□□□□ 0.52
SF3B2-212ENST00000531589 RREB1Q92766 1687 aa18.28■□□□□ 0.52
SF3B2-212ENST00000531589 FYB1O15117 783 aa18.28■□□□□ 0.52
SF3B2-212ENST00000531589 MAP3K19Q56UN5 1328 aa18.27■□□□□ 0.52
SF3B2-212ENST00000531589 LTV1Q96GA3 475 aaPredicted RBP18.27■□□□□ 0.52
SF3B2-212ENST00000531589 HOXC9P31274 260 aa18.26■□□□□ 0.51
SF3B2-212ENST00000531589 GGNBP2Q9H3C7 697 aa18.26■□□□□ 0.51
SF3B2-212ENST00000531589 CCER1Q8TC90 406 aaPredicted RBP18.25■□□□□ 0.51
SF3B2-212ENST00000531589 SBF2Q86WG5 1849 aa18.25■□□□□ 0.51
SF3B2-212ENST00000531589 RGPD3A6NKT7 1758 aaPredicted RBP18.25■□□□□ 0.51
SF3B2-212ENST00000531589 RGPD4Q7Z3J3 1758 aa18.25■□□□□ 0.51
SF3B2-212ENST00000531589 NUP188Q5SRE5 1749 aa18.24■□□□□ 0.51
SF3B2-212ENST00000531589 RTL1A6NKG5 1358 aa18.24■□□□□ 0.51
SF3B2-212ENST00000531589 PTF1AQ7RTS3 328 aa18.23■□□□□ 0.51
SF3B2-212ENST00000531589 FAM208AQ9UK61 1670 aaKnown RBP18.22■□□□□ 0.51
SF3B2-212ENST00000531589 FBLN1P23142 703 aa18.22■□□□□ 0.51
SF3B2-212ENST00000531589 RRS1Q15050 365 aaKnown RBP18.21■□□□□ 0.51
SF3B2-212ENST00000531589 TXNRD1Q16881 649 aa18.21■□□□□ 0.51
SF3B2-212ENST00000531589 SMG6Q86US8 1419 aaKnown RBP18.21■□□□□ 0.51
SF3B2-212ENST00000531589 KIF24Q5T7B8 1368 aa18.2■□□□□ 0.5
SF3B2-212ENST00000531589 KCNQ2O43526 872 aa18.2■□□□□ 0.5
SF3B2-212ENST00000531589 EIF4G2P78344 907 aaKnown RBP eCLIP18.2■□□□□ 0.5
SF3B2-212ENST00000531589 PROM2Q8N271 834 aa18.2■□□□□ 0.5
SF3B2-212ENST00000531589 ACSBG1Q96GR2 724 aa18.2■□□□□ 0.5
SF3B2-212ENST00000531589 SPON1Q9HCB6 807 aa18.2■□□□□ 0.5
SF3B2-212ENST00000531589 DDX54Q8TDD1 881 aaKnown RBP18.19■□□□□ 0.5
SF3B2-212ENST00000531589 STK32BQ9NY57 414 aa18.19■□□□□ 0.5
SF3B2-212ENST00000531589 CARD14Q9BXL6 1004 aa18.18■□□□□ 0.5
SF3B2-212ENST00000531589 CGNL1Q0VF96 1302 aa18.18■□□□□ 0.5
SF3B2-212ENST00000531589 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
SF3B2-212ENST00000531589 ZCRB1Q8TBF4 217 aaKnown RBP18.17■□□□□ 0.5
SF3B2-212ENST00000531589 FLT4P35916 1363 aa18.17■□□□□ 0.5
SF3B2-212ENST00000531589 NHSQ6T4R5 1651 aa18.16■□□□□ 0.5
SF3B2-212ENST00000531589 RAPGEF4Q8WZA2 1011 aa18.16■□□□□ 0.5
SF3B2-212ENST00000531589 POLR3GLQ9BT43 218 aa18.16■□□□□ 0.5
SF3B2-212ENST00000531589 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
SF3B2-212ENST00000531589 INSRP06213 1382 aa18.16■□□□□ 0.5
SF3B2-212ENST00000531589 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
SF3B2-212ENST00000531589 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
SF3B2-212ENST00000531589 PPP1R1BQ9UD71 204 aaPredicted RBP18.15■□□□□ 0.5
SF3B2-212ENST00000531589 KIF20BQ96Q89 1820 aa18.14■□□□□ 0.5
SF3B2-212ENST00000531589 SLC15A2Q16348 729 aa18.14■□□□□ 0.49
SF3B2-212ENST00000531589 HSP90AB2PQ58FF8 381 aa18.14■□□□□ 0.49
SF3B2-212ENST00000531589 MYOM1P52179 1685 aa18.13■□□□□ 0.49
SF3B2-212ENST00000531589 TATP17735 454 aaPredicted RBP18.13■□□□□ 0.49
SF3B2-212ENST00000531589 HSPA5P11021 654 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms