RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 COL5A2P05997 1499 aaPredicted RBP17.51■□□□□ 0.39
C11orf54-210ENST00000531516 COG3Q96JB2 828 aa17.51■□□□□ 0.39
C11orf54-210ENST00000531516 PIK3C2AO00443 1686 aa17.49■□□□□ 0.39
C11orf54-210ENST00000531516 AKAP12Q02952 1782 aa17.48■□□□□ 0.39
C11orf54-210ENST00000531516 DDB1Q16531 1140 aa17.48■□□□□ 0.39
C11orf54-210ENST00000531516 DEFB132Q7Z7B7 95 aa17.48■□□□□ 0.39
C11orf54-210ENST00000531516 EP400Q96L91 3159 aa17.48■□□□□ 0.39
C11orf54-210ENST00000531516 FAM182BQ5T319 152 aa17.47■□□□□ 0.39
C11orf54-210ENST00000531516 CARD10Q9BWT7 1032 aa17.47■□□□□ 0.39
C11orf54-210ENST00000531516 AXIN2Q9Y2T1 843 aa17.47■□□□□ 0.39
C11orf54-210ENST00000531516 ANKRD36BQ8N2N9 1353 aa17.47■□□□□ 0.39
C11orf54-210ENST00000531516 CD163L1Q9NR16 1453 aa17.47■□□□□ 0.39
C11orf54-210ENST00000531516 LMO7Q8WWI1 1683 aa17.47■□□□□ 0.39
C11orf54-210ENST00000531516 THSD7AQ9UPZ6 1657 aa17.45■□□□□ 0.38
C11orf54-210ENST00000531516 CCDC7Q96M83 1385 aa17.45■□□□□ 0.38
C11orf54-210ENST00000531516 TRIM37O94972 964 aa17.45■□□□□ 0.38
C11orf54-210ENST00000531516 EIF4G2P78344 907 aaKnown RBP eCLIP17.45■□□□□ 0.38
C11orf54-210ENST00000531516 BRWD3Q6RI45 1802 aa17.44■□□□□ 0.38
C11orf54-210ENST00000531516 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
C11orf54-210ENST00000531516 NLRP2Q9NX02 1062 aa17.44■□□□□ 0.38
C11orf54-210ENST00000531516 ABCC6O95255 1503 aa17.43■□□□□ 0.38
C11orf54-210ENST00000531516 EXOC5O00471 708 aa17.43■□□□□ 0.38
C11orf54-210ENST00000531516 APBA3O96018 575 aa17.43■□□□□ 0.38
C11orf54-210ENST00000531516 AMPHP49418 695 aa17.43■□□□□ 0.38
C11orf54-210ENST00000531516 POLR3GLQ9BT43 218 aa17.42■□□□□ 0.38
C11orf54-210ENST00000531516 NFAT5O94916 1531 aa17.42■□□□□ 0.38
C11orf54-210ENST00000531516 EN1Q05925 392 aaPredicted RBP17.41■□□□□ 0.38
C11orf54-210ENST00000531516 ANKRD24Q8TF21 1146 aa17.41■□□□□ 0.38
C11orf54-210ENST00000531516 OVOS2A0A0G2JMS6 1433 aa17.4■□□□□ 0.38
C11orf54-210ENST00000531516 OVOS2A0A0J9YW53 1432 aa17.4■□□□□ 0.38
C11orf54-210ENST00000531516 OVOS2Q6IE36 1432 aa17.4■□□□□ 0.38
C11orf54-210ENST00000531516 IP6K1Q92551 441 aa17.4■□□□□ 0.38
C11orf54-210ENST00000531516 ERBB3P21860 1342 aa17.4■□□□□ 0.38
C11orf54-210ENST00000531516 PARD3Q8TEW0 1356 aa17.4■□□□□ 0.38
C11orf54-210ENST00000531516 FYB1O15117 783 aa17.37■□□□□ 0.37
C11orf54-210ENST00000531516 IL2RBP14784 551 aa17.37■□□□□ 0.37
C11orf54-210ENST00000531516 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
C11orf54-210ENST00000531516 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
C11orf54-210ENST00000531516 DISP2A7MBM2 1401 aa17.37■□□□□ 0.37
C11orf54-210ENST00000531516 NBPF14Q5TI25 921 aa17.36■□□□□ 0.37
C11orf54-210ENST00000531516 RGPD1P0DJD0 1748 aa17.35■□□□□ 0.37
C11orf54-210ENST00000531516 CGNL1Q0VF96 1302 aa17.35■□□□□ 0.37
C11orf54-210ENST00000531516 MAP3K19Q56UN5 1328 aa17.35■□□□□ 0.37
C11orf54-210ENST00000531516 HSPA5P11021 654 aaKnown RBP17.34■□□□□ 0.37
C11orf54-210ENST00000531516 HOXC9P31274 260 aa17.34■□□□□ 0.37
C11orf54-210ENST00000531516 COL18A1P39060 1754 aa17.34■□□□□ 0.37
C11orf54-210ENST00000531516 EZH2Q15910 746 aaKnown RBP17.34■□□□□ 0.37
C11orf54-210ENST00000531516 USP54Q70EL1 1684 aa17.34■□□□□ 0.37
C11orf54-210ENST00000531516 SMG6Q86US8 1419 aaKnown RBP17.34■□□□□ 0.37
C11orf54-210ENST00000531516 PARP4Q9UKK3 1724 aaKnown RBP17.33■□□□□ 0.37
C11orf54-210ENST00000531516 RTL1A6NKG5 1358 aa17.33■□□□□ 0.36
C11orf54-210ENST00000531516 CAMKK2Q96RR4 588 aa17.33■□□□□ 0.36
C11orf54-210ENST00000531516 BCL11BQ9C0K0 894 aaPredicted RBP17.33■□□□□ 0.36
C11orf54-210ENST00000531516 MARCH10Q8NA82 808 aaPredicted RBP17.32■□□□□ 0.36
C11orf54-210ENST00000531516 NSD3Q9BZ95 1437 aa17.31■□□□□ 0.36
C11orf54-210ENST00000531516 RRS1Q15050 365 aaKnown RBP17.3■□□□□ 0.36
C11orf54-210ENST00000531516 BCL9O00512 1426 aa17.3■□□□□ 0.36
C11orf54-210ENST00000531516 TNS2Q63HR2 1409 aa17.3■□□□□ 0.36
C11orf54-210ENST00000531516 KIF24Q5T7B8 1368 aa17.29■□□□□ 0.36
C11orf54-210ENST00000531516 PSDA5PKW4 1024 aaPredicted RBP17.29■□□□□ 0.36
C11orf54-210ENST00000531516 PLSCR1O15162 318 aa17.29■□□□□ 0.36
C11orf54-210ENST00000531516 R3HDM1Q15032 1099 aaKnown RBP17.28■□□□□ 0.36
C11orf54-210ENST00000531516 CARD14Q9BXL6 1004 aa17.28■□□□□ 0.36
C11orf54-210ENST00000531516 FLT4P35916 1363 aa17.28■□□□□ 0.36
C11orf54-210ENST00000531516 PPM1GO15355 546 aaPredicted RBP17.27■□□□□ 0.36
C11orf54-210ENST00000531516 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
C11orf54-210ENST00000531516 LRRC37A3O60309 1634 aa17.27■□□□□ 0.36
C11orf54-210ENST00000531516 LTN1O94822 1766 aa17.26■□□□□ 0.35
C11orf54-210ENST00000531516 FBLN1P23142 703 aa17.26■□□□□ 0.35
C11orf54-210ENST00000531516 DDX54Q8TDD1 881 aaKnown RBP17.26■□□□□ 0.35
C11orf54-210ENST00000531516 INSRP06213 1382 aa17.25■□□□□ 0.35
C11orf54-210ENST00000531516 ZCRB1Q8TBF4 217 aaKnown RBP17.24■□□□□ 0.35
C11orf54-210ENST00000531516 PANK3Q9H999 370 aa17.24■□□□□ 0.35
C11orf54-210ENST00000531516 RGPD5Q99666 1765 aa17.23■□□□□ 0.35
C11orf54-210ENST00000531516 TATP17735 454 aaPredicted RBP17.23■□□□□ 0.35
C11orf54-210ENST00000531516 KNSTRNQ9Y448 316 aa17.23■□□□□ 0.35
C11orf54-210ENST00000531516 TNS1Q9HBL0 1735 aaKnown RBP17.23■□□□□ 0.35
C11orf54-210ENST00000531516 HSP90AB2PQ58FF8 381 aa17.22■□□□□ 0.35
C11orf54-210ENST00000531516 ACSBG1Q96GR2 724 aa17.22■□□□□ 0.35
C11orf54-210ENST00000531516 NSD2O96028 1365 aa17.21■□□□□ 0.35
C11orf54-210ENST00000531516 NBPF6Q5VWK0 638 aa17.21■□□□□ 0.35
C11orf54-210ENST00000531516 NBPF4Q96M43 638 aa17.21■□□□□ 0.35
C11orf54-210ENST00000531516 FAM208AQ9UK61 1670 aaKnown RBP17.2■□□□□ 0.34
C11orf54-210ENST00000531516 SYTL4Q96C24 671 aaPredicted RBP17.2■□□□□ 0.34
C11orf54-210ENST00000531516 EMILIN1Q9Y6C2 1016 aa17.2■□□□□ 0.34
C11orf54-210ENST00000531516 HMGB2P26583 209 aaKnown RBP17.19■□□□□ 0.34
C11orf54-210ENST00000531516 TNNT2P45379 298 aaPredicted RBP17.19■□□□□ 0.34
C11orf54-210ENST00000531516 TXNRD1Q16881 649 aa17.19■□□□□ 0.34
C11orf54-210ENST00000531516 STK32BQ9NY57 414 aa17.19■□□□□ 0.34
C11orf54-210ENST00000531516 WNK3Q9BYP7 1800 aa17.19■□□□□ 0.34
C11orf54-210ENST00000531516 WASHC2AQ641Q2 1341 aa17.19■□□□□ 0.34
C11orf54-210ENST00000531516 PEAK1Q9H792 1746 aa17.18■□□□□ 0.34
C11orf54-210ENST00000531516 KCNQ2O43526 872 aa17.18■□□□□ 0.34
C11orf54-210ENST00000531516 MORC1Q86VD1 984 aa17.18■□□□□ 0.34
C11orf54-210ENST00000531516 USHBP1Q8N6Y0 703 aa17.18■□□□□ 0.34
C11orf54-210ENST00000531516 KIF20BQ96Q89 1820 aa17.17■□□□□ 0.34
C11orf54-210ENST00000531516 PCDH11XQ9BZA7 1347 aa17.17■□□□□ 0.34
C11orf54-210ENST00000531516 PCDH11YQ9BZA8 1340 aa17.17■□□□□ 0.34
C11orf54-210ENST00000531516 MYOM1P52179 1685 aa17.16■□□□□ 0.34
C11orf54-210ENST00000531516 PTF1AQ7RTS3 328 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms