RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-209ENST00000531474 PLCH1Q4KWH8 1693 aa12.68□□□□□ -0.38
NXF1-209ENST00000531474 PPM1GO15355 546 aaPredicted RBP12.68□□□□□ -0.38
NXF1-209ENST00000531474 USP21Q9UK80 565 aa12.68□□□□□ -0.38
NXF1-209ENST00000531474 EMILIN1Q9Y6C2 1016 aa12.68□□□□□ -0.38
NXF1-209ENST00000531474 SLIT2O94813 1529 aa12.67□□□□□ -0.38
NXF1-209ENST00000531474 FNBP4Q8N3X1 1017 aaPredicted RBP12.67□□□□□ -0.38
NXF1-209ENST00000531474 RTL1A6NKG5 1358 aa12.67□□□□□ -0.38
NXF1-209ENST00000531474 LMO7Q8WWI1 1683 aa12.67□□□□□ -0.38
NXF1-209ENST00000531474 LTN1O94822 1766 aa12.66□□□□□ -0.38
NXF1-209ENST00000531474 STRN4Q9NRL3 753 aa12.66□□□□□ -0.38
NXF1-209ENST00000531474 POLKQ9UBT6 870 aa12.66□□□□□ -0.38
NXF1-209ENST00000531474 CAMTA1Q9Y6Y1 1673 aa12.66□□□□□ -0.38
NXF1-209ENST00000531474 ABCC6O95255 1503 aa12.66□□□□□ -0.38
NXF1-209ENST00000531474 FLT4P35916 1363 aa12.66□□□□□ -0.38
NXF1-209ENST00000531474 BCL9LQ86UU0 1499 aa12.65□□□□□ -0.38
NXF1-209ENST00000531474 MYBBP1AQ9BQG0 1328 aaKnown RBP12.65□□□□□ -0.38
NXF1-209ENST00000531474 HOXC9P31274 260 aa12.65□□□□□ -0.38
NXF1-209ENST00000531474 EVA1CP58658 441 aa12.65□□□□□ -0.38
NXF1-209ENST00000531474 ZNF772Q68DY9 489 aaPredicted RBP12.65□□□□□ -0.38
NXF1-209ENST00000531474 UNC5CLQ8IV45 518 aa12.65□□□□□ -0.38
NXF1-209ENST00000531474 IP6K1Q92551 441 aa12.65□□□□□ -0.38
NXF1-209ENST00000531474 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
NXF1-209ENST00000531474 PARD3Q8TEW0 1356 aa12.65□□□□□ -0.38
NXF1-209ENST00000531474 NWD2Q9ULI1 1742 aa12.65□□□□□ -0.38
NXF1-209ENST00000531474 COL5A2P05997 1499 aaPredicted RBP12.65□□□□□ -0.38
NXF1-209ENST00000531474 BLMP54132 1417 aaPredicted RBP12.64□□□□□ -0.39
NXF1-209ENST00000531474 SMG6Q86US8 1419 aaKnown RBP12.64□□□□□ -0.39
NXF1-209ENST00000531474 COL18A1P39060 1754 aa12.64□□□□□ -0.39
NXF1-209ENST00000531474 CSB-PGBD3P0DP91 1061 aa12.64□□□□□ -0.39
NXF1-209ENST00000531474 HNRNPUQ00839 825 aaKnown RBP eCLIP12.64□□□□□ -0.39
NXF1-209ENST00000531474 LTV1Q96GA3 475 aaPredicted RBP12.64□□□□□ -0.39
NXF1-209ENST00000531474 CCDC9Q9Y3X0 531 aaKnown RBP12.64□□□□□ -0.39
NXF1-209ENST00000531474 NRAPQ86VF7 1730 aa12.64□□□□□ -0.39
NXF1-209ENST00000531474 PEAK1Q9H792 1746 aa12.64□□□□□ -0.39
NXF1-209ENST00000531474 KIF24Q5T7B8 1368 aa12.64□□□□□ -0.39
NXF1-209ENST00000531474 PPP2R1AP30153 589 aa12.63□□□□□ -0.39
NXF1-209ENST00000531474 MTHFSP49914 203 aa12.63□□□□□ -0.39
NXF1-209ENST00000531474 ANKRD24Q8TF21 1146 aa12.63□□□□□ -0.39
NXF1-209ENST00000531474 TRPC5Q9UL62 973 aaPredicted RBP12.63□□□□□ -0.39
NXF1-209ENST00000531474 ATRNO75882 1429 aa12.62□□□□□ -0.39
NXF1-209ENST00000531474 CDK12Q9NYV4 1490 aaPredicted RBP12.62□□□□□ -0.39
NXF1-209ENST00000531474 INSRP06213 1382 aa12.62□□□□□ -0.39
NXF1-209ENST00000531474 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
NXF1-209ENST00000531474 LARP1Q6PKG0 1096 aaKnown RBP12.62□□□□□ -0.39
NXF1-209ENST00000531474 FAM9BQ8IZU0 186 aa12.62□□□□□ -0.39
NXF1-209ENST00000531474 QTRT2Q9H974 415 aaKnown RBP12.62□□□□□ -0.39
NXF1-209ENST00000531474 RGS17Q9UGC6 210 aaPredicted RBP12.62□□□□□ -0.39
NXF1-209ENST00000531474 ERBB3P21860 1342 aa12.62□□□□□ -0.39
NXF1-209ENST00000531474 VPS72Q15906 364 aa12.61□□□□□ -0.39
NXF1-209ENST00000531474 TOM1L2Q6ZVM7 507 aa12.61□□□□□ -0.39
NXF1-209ENST00000531474 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.61□□□□□ -0.39
NXF1-209ENST00000531474 WDR17Q8IZU2 1322 aa12.61□□□□□ -0.39
NXF1-209ENST00000531474 NLRP2Q9NX02 1062 aa12.6□□□□□ -0.39
NXF1-209ENST00000531474 CRB1P82279 1406 aa12.6□□□□□ -0.39
NXF1-209ENST00000531474 RGPD5Q99666 1765 aa12.59□□□□□ -0.39
NXF1-209ENST00000531474 NEFLP07196 543 aa12.59□□□□□ -0.39
NXF1-209ENST00000531474 POTEAQ6S8J7 498 aa12.59□□□□□ -0.39
NXF1-209ENST00000531474 CFAP53Q96M91 514 aa12.59□□□□□ -0.39
NXF1-209ENST00000531474 USP35Q9P2H5 1018 aa12.59□□□□□ -0.39
NXF1-209ENST00000531474 MAP2P11137 1827 aaKnown RBP12.59□□□□□ -0.39
NXF1-209ENST00000531474 SPATA31A5Q5VU36 1347 aa12.59□□□□□ -0.39
NXF1-209ENST00000531474 ZBED9Q6R2W3 1325 aa12.59□□□□□ -0.39
NXF1-209ENST00000531474 SPATA31A7Q8IWB4 1347 aa12.59□□□□□ -0.39
NXF1-209ENST00000531474 CCDC184Q52MB2 194 aa12.58□□□□□ -0.4
NXF1-209ENST00000531474 PNISRQ8TF01 805 aaKnown RBP12.58□□□□□ -0.4
NXF1-209ENST00000531474 GJD4Q96KN9 370 aaPredicted RBP12.58□□□□□ -0.4
NXF1-209ENST00000531474 SPATA31A1Q5TZJ5 1347 aa12.58□□□□□ -0.4
NXF1-209ENST00000531474 RBM6P78332 1123 aaKnown RBP12.57□□□□□ -0.4
NXF1-209ENST00000531474 EIF4A2Q14240 407 aaKnown RBP12.57□□□□□ -0.4
NXF1-209ENST00000531474 PELP1Q8IZL8 1130 aaKnown RBP12.57□□□□□ -0.4
NXF1-209ENST00000531474 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
NXF1-209ENST00000531474 GLI3P10071 1580 aa12.56□□□□□ -0.4
NXF1-209ENST00000531474 DIAPH1O60610 1272 aaKnown RBP12.56□□□□□ -0.4
NXF1-209ENST00000531474 RXRBP28702 533 aa12.56□□□□□ -0.4
NXF1-209ENST00000531474 FAM208AQ9UK61 1670 aaKnown RBP12.55□□□□□ -0.4
NXF1-209ENST00000531474 COL3A1P02461 1466 aaPredicted RBP12.55□□□□□ -0.4
NXF1-209ENST00000531474 A0A0G2JS52 829 aa12.55□□□□□ -0.4
NXF1-209ENST00000531474 MYT1Q01538 1121 aa12.55□□□□□ -0.4
NXF1-209ENST00000531474 FAM98CQ17RN3 349 aaKnown RBP12.55□□□□□ -0.4
NXF1-209ENST00000531474 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
NXF1-209ENST00000531474 TCP11L2Q8N4U5 519 aa12.55□□□□□ -0.4
NXF1-209ENST00000531474 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
NXF1-209ENST00000531474 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
NXF1-209ENST00000531474 IL13P35225 146 aa12.54□□□□□ -0.4
NXF1-209ENST00000531474 THRAP3Q9Y2W1 955 aaKnown RBP12.54□□□□□ -0.4
NXF1-209ENST00000531474 U2SURPO15042 1029 aaKnown RBP12.53□□□□□ -0.4
NXF1-209ENST00000531474 EYA1Q99502 592 aa12.53□□□□□ -0.4
NXF1-209ENST00000531474 ERICH6BQ5W0A0 696 aa12.52□□□□□ -0.41
NXF1-209ENST00000531474 BARGINQ6ZT62 677 aa12.52□□□□□ -0.41
NXF1-209ENST00000531474 NUDCQ9Y266 331 aa12.52□□□□□ -0.41
NXF1-209ENST00000531474 IGSF1Q8N6C5 1336 aa12.52□□□□□ -0.41
NXF1-209ENST00000531474 SEPT12Q8IYM1 358 aa12.51□□□□□ -0.41
NXF1-209ENST00000531474 RGS12O14924 1447 aa12.51□□□□□ -0.41
NXF1-209ENST00000531474 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
NXF1-209ENST00000531474 IL2RBP14784 551 aa12.5□□□□□ -0.41
NXF1-209ENST00000531474 SULT6B1Q6IMI4 303 aa12.5□□□□□ -0.41
NXF1-209ENST00000531474 AEBP1Q8IUX7 1158 aa12.5□□□□□ -0.41
NXF1-209ENST00000531474 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
NXF1-209ENST00000531474 CDCA7Q9BWT1 371 aaPredicted RBP12.5□□□□□ -0.41
NXF1-209ENST00000531474 SUPT16HQ9Y5B9 1047 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms