RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 CENPJQ9HC77 1338 aaPredicted RBP13.4□□□□□ -0.26
CHMP4A-205ENST00000531158 OVOS2A0A0G2JMS6 1433 aa13.4□□□□□ -0.26
CHMP4A-205ENST00000531158 OVOS2A0A0J9YW53 1432 aa13.4□□□□□ -0.26
CHMP4A-205ENST00000531158 OVOS2Q6IE36 1432 aa13.4□□□□□ -0.26
CHMP4A-205ENST00000531158 AATKQ6ZMQ8 1374 aa13.4□□□□□ -0.26
CHMP4A-205ENST00000531158 LTN1O94822 1766 aa13.4□□□□□ -0.26
CHMP4A-205ENST00000531158 NFAT5O94916 1531 aa13.39□□□□□ -0.27
CHMP4A-205ENST00000531158 SRPK2P78362 688 aaKnown RBP13.39□□□□□ -0.27
CHMP4A-205ENST00000531158 NLRP13Q86W25 1043 aa13.39□□□□□ -0.27
CHMP4A-205ENST00000531158 THRAP3Q9Y2W1 955 aaKnown RBP13.39□□□□□ -0.27
CHMP4A-205ENST00000531158 BRD4O60885 1362 aaPredicted RBP13.38□□□□□ -0.27
CHMP4A-205ENST00000531158 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
CHMP4A-205ENST00000531158 CABP1Q9NZU7 370 aa13.38□□□□□ -0.27
CHMP4A-205ENST00000531158 AXIN2Q9Y2T1 843 aa13.38□□□□□ -0.27
CHMP4A-205ENST00000531158 CPSF1Q10570 1443 aaKnown RBP13.38□□□□□ -0.27
CHMP4A-205ENST00000531158 NHSQ6T4R5 1651 aa13.37□□□□□ -0.27
CHMP4A-205ENST00000531158 PDGFDQ9GZP0 370 aaPredicted RBP13.37□□□□□ -0.27
CHMP4A-205ENST00000531158 ZBTB7AO95365 584 aa13.36□□□□□ -0.27
CHMP4A-205ENST00000531158 SYT17Q9BSW7 474 aa13.36□□□□□ -0.27
CHMP4A-205ENST00000531158 PAPPAQ13219 1627 aa13.35□□□□□ -0.27
CHMP4A-205ENST00000531158 ZBTB7CA1YPR0 619 aa13.35□□□□□ -0.27
CHMP4A-205ENST00000531158 NLRP6P59044 892 aa13.35□□□□□ -0.27
CHMP4A-205ENST00000531158 PROM2Q8N271 834 aa13.35□□□□□ -0.27
CHMP4A-205ENST00000531158 FHDC1Q9C0D6 1143 aaPredicted RBP13.35□□□□□ -0.27
CHMP4A-205ENST00000531158 WDR17Q8IZU2 1322 aa13.35□□□□□ -0.27
CHMP4A-205ENST00000531158 BTAF1O14981 1849 aa13.34□□□□□ -0.27
CHMP4A-205ENST00000531158 BCL9O00512 1426 aa13.34□□□□□ -0.27
CHMP4A-205ENST00000531158 MARCH10Q8NA82 808 aaPredicted RBP13.34□□□□□ -0.27
CHMP4A-205ENST00000531158 CHD4Q14839 1912 aa13.34□□□□□ -0.27
CHMP4A-205ENST00000531158 PTGER2P43116 358 aa13.33□□□□□ -0.28
CHMP4A-205ENST00000531158 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
CHMP4A-205ENST00000531158 ABCC6O95255 1503 aa13.33□□□□□ -0.28
CHMP4A-205ENST00000531158 PLSCR1O15162 318 aa13.32□□□□□ -0.28
CHMP4A-205ENST00000531158 DDB1Q16531 1140 aa13.32□□□□□ -0.28
CHMP4A-205ENST00000531158 TOM1L2Q6ZVM7 507 aa13.32□□□□□ -0.28
CHMP4A-205ENST00000531158 L3MBTL2Q969R5 705 aa13.32□□□□□ -0.28
CHMP4A-205ENST00000531158 TUBGCP6Q96RT7 1819 aa13.32□□□□□ -0.28
CHMP4A-205ENST00000531158 CD163L1Q9NR16 1453 aa13.31□□□□□ -0.28
CHMP4A-205ENST00000531158 ARHGEF25Q86VW2 580 aa13.31□□□□□ -0.28
CHMP4A-205ENST00000531158 BCL11BQ9C0K0 894 aaPredicted RBP13.31□□□□□ -0.28
CHMP4A-205ENST00000531158 KAT6BQ8WYB5 2073 aa13.31□□□□□ -0.28
CHMP4A-205ENST00000531158 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
CHMP4A-205ENST00000531158 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
CHMP4A-205ENST00000531158 C11orf95C9JLR9 678 aaPredicted RBP13.29□□□□□ -0.28
CHMP4A-205ENST00000531158 GPR162Q16538 588 aa13.29□□□□□ -0.28
CHMP4A-205ENST00000531158 COL24A1Q17RW2 1714 aa13.29□□□□□ -0.28
CHMP4A-205ENST00000531158 SHANK3Q9BYB0 1731 aa13.29□□□□□ -0.28
CHMP4A-205ENST00000531158 RGPD2P0DJD1 1756 aa13.29□□□□□ -0.28
CHMP4A-205ENST00000531158 GOLGB1Q14789 3259 aaKnown RBP13.28□□□□□ -0.28
CHMP4A-205ENST00000531158 QSER1Q2KHR3 1735 aa13.28□□□□□ -0.28
CHMP4A-205ENST00000531158 SOX12O15370 315 aa13.28□□□□□ -0.28
CHMP4A-205ENST00000531158 EVC2Q86UK5 1308 aa13.28□□□□□ -0.28
CHMP4A-205ENST00000531158 SIN3AQ96ST3 1273 aa13.27□□□□□ -0.29
CHMP4A-205ENST00000531158 CARD10Q9BWT7 1032 aa13.27□□□□□ -0.29
CHMP4A-205ENST00000531158 DOT1LQ8TEK3 1739 aa13.25□□□□□ -0.29
CHMP4A-205ENST00000531158 FAM208AQ9UK61 1670 aaKnown RBP13.25□□□□□ -0.29
CHMP4A-205ENST00000531158 ROCK2O75116 1388 aaKnown RBP13.25□□□□□ -0.29
CHMP4A-205ENST00000531158 KTN1Q86UP2 1357 aaKnown RBP13.25□□□□□ -0.29
CHMP4A-205ENST00000531158 SBNO2Q9Y2G9 1366 aa13.25□□□□□ -0.29
CHMP4A-205ENST00000531158 TTC21AQ8NDW8 1320 aa13.25□□□□□ -0.29
CHMP4A-205ENST00000531158 CAPN15O75808 1086 aa13.25□□□□□ -0.29
CHMP4A-205ENST00000531158 HSPA6P17066 643 aa13.25□□□□□ -0.29
CHMP4A-205ENST00000531158 TXNRD1Q16881 649 aa13.25□□□□□ -0.29
CHMP4A-205ENST00000531158 CDCA7Q9BWT1 371 aaPredicted RBP13.25□□□□□ -0.29
CHMP4A-205ENST00000531158 LY75O60449 1722 aa13.25□□□□□ -0.29
CHMP4A-205ENST00000531158 USP31Q70CQ4 1352 aa13.24□□□□□ -0.29
CHMP4A-205ENST00000531158 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
CHMP4A-205ENST00000531158 KCNH5Q8NCM2 988 aa13.24□□□□□ -0.29
CHMP4A-205ENST00000531158 SGIP1Q9BQI5 828 aa13.24□□□□□ -0.29
CHMP4A-205ENST00000531158 ERBB3P21860 1342 aa13.23□□□□□ -0.29
CHMP4A-205ENST00000531158 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
CHMP4A-205ENST00000531158 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
CHMP4A-205ENST00000531158 CSB-PGBD3P0DP91 1061 aa13.22□□□□□ -0.29
CHMP4A-205ENST00000531158 SLC15A2Q16348 729 aa13.22□□□□□ -0.29
CHMP4A-205ENST00000531158 NME9Q86XW9 330 aa13.22□□□□□ -0.29
CHMP4A-205ENST00000531158 ARXQ96QS3 562 aa13.22□□□□□ -0.29
CHMP4A-205ENST00000531158 MTFR1LQ9H019 292 aa13.22□□□□□ -0.29
CHMP4A-205ENST00000531158 STK32BQ9NY57 414 aa13.21□□□□□ -0.29
CHMP4A-205ENST00000531158 EXOC5O00471 708 aa13.2□□□□□ -0.3
CHMP4A-205ENST00000531158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHMP4A-205ENST00000531158 ACSBG1Q96GR2 724 aa13.2□□□□□ -0.3
CHMP4A-205ENST00000531158 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
CHMP4A-205ENST00000531158 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
CHMP4A-205ENST00000531158 A0A1W2PP64 1363 aa13.18□□□□□ -0.3
CHMP4A-205ENST00000531158 NEUROD1Q13562 356 aa13.17□□□□□ -0.3
CHMP4A-205ENST00000531158 KLHL34Q8N239 644 aa13.17□□□□□ -0.3
CHMP4A-205ENST00000531158 MAP3K5Q99683 1374 aa13.17□□□□□ -0.3
CHMP4A-205ENST00000531158 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
CHMP4A-205ENST00000531158 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
CHMP4A-205ENST00000531158 IL2RBP14784 551 aa13.16□□□□□ -0.3
CHMP4A-205ENST00000531158 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
CHMP4A-205ENST00000531158 ANKRD24Q8TF21 1146 aa13.15□□□□□ -0.3
CHMP4A-205ENST00000531158 SLC12A5Q9H2X9 1139 aa13.15□□□□□ -0.3
CHMP4A-205ENST00000531158 GPBP1L1Q9HC44 474 aaPredicted RBP13.15□□□□□ -0.3
CHMP4A-205ENST00000531158 COL13A1Q5TAT6 717 aaPredicted RBP13.14□□□□□ -0.31
CHMP4A-205ENST00000531158 NSD2O96028 1365 aa13.14□□□□□ -0.31
CHMP4A-205ENST00000531158 C5P01031 1676 aa13.14□□□□□ -0.31
CHMP4A-205ENST00000531158 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
CHMP4A-205ENST00000531158 MEGF6O75095 1541 aa13.13□□□□□ -0.31
CHMP4A-205ENST00000531158 AKT1S1Q96B36 256 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms