RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 MARCH10Q8NA82 808 aaPredicted RBP19.16■□□□□ 0.66
HIF3A-214ENST00000531043 TTC21BQ7Z4L5 1316 aa19.16■□□□□ 0.66
HIF3A-214ENST00000531043 CPSF1Q10570 1443 aaKnown RBP19.16■□□□□ 0.66
HIF3A-214ENST00000531043 ARHGEF25Q86VW2 580 aa19.15■□□□□ 0.66
HIF3A-214ENST00000531043 PDGFDQ9GZP0 370 aaPredicted RBP19.15■□□□□ 0.66
HIF3A-214ENST00000531043 EVC2Q86UK5 1308 aa19.15■□□□□ 0.66
HIF3A-214ENST00000531043 WDR17Q8IZU2 1322 aa19.15■□□□□ 0.66
HIF3A-214ENST00000531043 PROM2Q8N271 834 aa19.14■□□□□ 0.65
HIF3A-214ENST00000531043 KCNQ2O43526 872 aa19.13■□□□□ 0.65
HIF3A-214ENST00000531043 SPON1Q9HCB6 807 aa19.13■□□□□ 0.65
HIF3A-214ENST00000531043 RGPD3A6NKT7 1758 aaPredicted RBP19.13■□□□□ 0.65
HIF3A-214ENST00000531043 RGPD4Q7Z3J3 1758 aa19.13■□□□□ 0.65
HIF3A-214ENST00000531043 PLSCR1O15162 318 aa19.12■□□□□ 0.65
HIF3A-214ENST00000531043 BCL11BQ9C0K0 894 aaPredicted RBP19.12■□□□□ 0.65
HIF3A-214ENST00000531043 CASZ1Q86V15 1759 aa19.11■□□□□ 0.65
HIF3A-214ENST00000531043 NFAT5O94916 1531 aa19.11■□□□□ 0.65
HIF3A-214ENST00000531043 NEUROD1Q13562 356 aa19.11■□□□□ 0.65
HIF3A-214ENST00000531043 ROCK2O75116 1388 aaKnown RBP19.1■□□□□ 0.65
HIF3A-214ENST00000531043 C11orf95C9JLR9 678 aaPredicted RBP19.1■□□□□ 0.65
HIF3A-214ENST00000531043 CARD10Q9BWT7 1032 aa19.1■□□□□ 0.65
HIF3A-214ENST00000531043 PPP1R1BQ9UD71 204 aaPredicted RBP19.1■□□□□ 0.65
HIF3A-214ENST00000531043 CSB-PGBD3P0DP91 1061 aa19.09■□□□□ 0.65
HIF3A-214ENST00000531043 ZNF692Q9BU19 519 aaPredicted RBP19.09■□□□□ 0.65
HIF3A-214ENST00000531043 KCNH5Q8NCM2 988 aa19.08■□□□□ 0.64
HIF3A-214ENST00000531043 KAT6BQ8WYB5 2073 aa19.07■□□□□ 0.64
HIF3A-214ENST00000531043 YY1P25490 414 aa19.07■□□□□ 0.64
HIF3A-214ENST00000531043 BCL9O00512 1426 aa19.07■□□□□ 0.64
HIF3A-214ENST00000531043 KTN1Q86UP2 1357 aaKnown RBP19.06■□□□□ 0.64
HIF3A-214ENST00000531043 TTC21AQ8NDW8 1320 aa19.06■□□□□ 0.64
HIF3A-214ENST00000531043 MON2Q7Z3U7 1717 aa19.06■□□□□ 0.64
HIF3A-214ENST00000531043 ZBTB7AO95365 584 aa19.06■□□□□ 0.64
HIF3A-214ENST00000531043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.05■□□□□ 0.64
HIF3A-214ENST00000531043 CDCA7Q9BWT1 371 aaPredicted RBP19.05■□□□□ 0.64
HIF3A-214ENST00000531043 NINLQ9Y2I6 1382 aa19.04■□□□□ 0.64
HIF3A-214ENST00000531043 CD163L1Q9NR16 1453 aa19.03■□□□□ 0.64
HIF3A-214ENST00000531043 EXOC5O00471 708 aa19.03■□□□□ 0.64
HIF3A-214ENST00000531043 TXNRD1Q16881 649 aa19.03■□□□□ 0.64
HIF3A-214ENST00000531043 NME9Q86XW9 330 aa19.03■□□□□ 0.64
HIF3A-214ENST00000531043 ATF5Q9Y2D1 282 aaPredicted RBP19.03■□□□□ 0.64
HIF3A-214ENST00000531043 MYOM1P52179 1685 aa19.02■□□□□ 0.64
HIF3A-214ENST00000531043 PTGER2P43116 358 aa19.02■□□□□ 0.64
HIF3A-214ENST00000531043 TNS2Q63HR2 1409 aa19.01■□□□□ 0.63
HIF3A-214ENST00000531043 ACSBG1Q96GR2 724 aa19.01■□□□□ 0.63
HIF3A-214ENST00000531043 CCDC7Q96M83 1385 aa19.01■□□□□ 0.63
HIF3A-214ENST00000531043 SBNO2Q9Y2G9 1366 aa19.01■□□□□ 0.63
HIF3A-214ENST00000531043 LTN1O94822 1766 aa19.01■□□□□ 0.63
HIF3A-214ENST00000531043 USP31Q70CQ4 1352 aa19■□□□□ 0.63
HIF3A-214ENST00000531043 USP54Q70EL1 1684 aa18.99■□□□□ 0.63
HIF3A-214ENST00000531043 SLC12A5Q9H2X9 1139 aa18.99■□□□□ 0.63
HIF3A-214ENST00000531043 NLRP2Q9NX02 1062 aa18.99■□□□□ 0.63
HIF3A-214ENST00000531043 ABCC6O95255 1503 aa18.99■□□□□ 0.63
HIF3A-214ENST00000531043 ERBB3P21860 1342 aa18.99■□□□□ 0.63
HIF3A-214ENST00000531043 NHSQ6T4R5 1651 aa18.98■□□□□ 0.63
HIF3A-214ENST00000531043 STK32BQ9NY57 414 aa18.98■□□□□ 0.63
HIF3A-214ENST00000531043 SLC15A2Q16348 729 aa18.97■□□□□ 0.63
HIF3A-214ENST00000531043 TMC1Q8TDI8 760 aa18.97■□□□□ 0.63
HIF3A-214ENST00000531043 BTAF1O14981 1849 aa18.96■□□□□ 0.63
HIF3A-214ENST00000531043 ANKRD24Q8TF21 1146 aa18.95■□□□□ 0.62
HIF3A-214ENST00000531043 CARD11Q9BXL7 1154 aa18.95■□□□□ 0.62
HIF3A-214ENST00000531043 IL2RBP14784 551 aa18.94■□□□□ 0.62
HIF3A-214ENST00000531043 SGIP1Q9BQI5 828 aa18.94■□□□□ 0.62
HIF3A-214ENST00000531043 PAPPAQ13219 1627 aa18.93■□□□□ 0.62
HIF3A-214ENST00000531043 FHDC1Q9C0D6 1143 aaPredicted RBP18.93■□□□□ 0.62
HIF3A-214ENST00000531043 UTRNP46939 3433 aa18.92■□□□□ 0.62
HIF3A-214ENST00000531043 ZNF827Q17R98 1081 aa18.92■□□□□ 0.62
HIF3A-214ENST00000531043 LRRC4BQ9NT99 713 aa18.92■□□□□ 0.62
HIF3A-214ENST00000531043 A0A1W2PP64 1363 aa18.92■□□□□ 0.62
HIF3A-214ENST00000531043 DCAF8L1A6NGE4 600 aa18.91■□□□□ 0.62
HIF3A-214ENST00000531043 SYT17Q9BSW7 474 aa18.91■□□□□ 0.62
HIF3A-214ENST00000531043 EDC4Q6P2E9 1401 aaKnown RBP18.91■□□□□ 0.62
HIF3A-214ENST00000531043 HDGFL2Q7Z4V5 671 aaPredicted RBP18.9■□□□□ 0.62
HIF3A-214ENST00000531043 MTFR1LQ9H019 292 aa18.9■□□□□ 0.62
HIF3A-214ENST00000531043 FBLN1P23142 703 aa18.89■□□□□ 0.61
HIF3A-214ENST00000531043 LTV1Q96GA3 475 aaPredicted RBP18.89■□□□□ 0.61
HIF3A-214ENST00000531043 RGPD2P0DJD1 1756 aa18.88■□□□□ 0.61
HIF3A-214ENST00000531043 IP6K1Q92551 441 aa18.87■□□□□ 0.61
HIF3A-214ENST00000531043 KCNQ4P56696 695 aa18.86■□□□□ 0.61
HIF3A-214ENST00000531043 DDX54Q8TDD1 881 aaKnown RBP18.86■□□□□ 0.61
HIF3A-214ENST00000531043 CHD4Q14839 1912 aa18.85■□□□□ 0.61
HIF3A-214ENST00000531043 TERF2IPQ9NYB0 399 aa18.85■□□□□ 0.61
HIF3A-214ENST00000531043 TUBGCP6Q96RT7 1819 aa18.84■□□□□ 0.61
HIF3A-214ENST00000531043 ZNF784Q8NCA9 323 aaPredicted RBP18.84■□□□□ 0.61
HIF3A-214ENST00000531043 AKT1S1Q96B36 256 aa18.84■□□□□ 0.61
HIF3A-214ENST00000531043 ARXQ96QS3 562 aa18.84■□□□□ 0.61
HIF3A-214ENST00000531043 TESK2Q96S53 571 aa18.84■□□□□ 0.61
HIF3A-214ENST00000531043 MAP3K19Q56UN5 1328 aa18.83■□□□□ 0.61
HIF3A-214ENST00000531043 SHANK3Q9BYB0 1731 aa18.83■□□□□ 0.6
HIF3A-214ENST00000531043 FAM208AQ9UK61 1670 aaKnown RBP18.82■□□□□ 0.6
HIF3A-214ENST00000531043 DOT1LQ8TEK3 1739 aa18.81■□□□□ 0.6
HIF3A-214ENST00000531043 ST20-MTHFSA0A0A6YYL1 179 aa18.81■□□□□ 0.6
HIF3A-214ENST00000531043 HOXC9P31274 260 aa18.81■□□□□ 0.6
HIF3A-214ENST00000531043 PRIM1P49642 420 aaKnown RBP18.81■□□□□ 0.6
HIF3A-214ENST00000531043 PUS7Q96PZ0 661 aaKnown RBP18.81■□□□□ 0.6
HIF3A-214ENST00000531043 TONSLQ96HA7 1378 aa18.81■□□□□ 0.6
HIF3A-214ENST00000531043 NSD2O96028 1365 aa18.8■□□□□ 0.6
HIF3A-214ENST00000531043 MEGF6O75095 1541 aa18.79■□□□□ 0.6
HIF3A-214ENST00000531043 QSER1Q2KHR3 1735 aa18.79■□□□□ 0.6
HIF3A-214ENST00000531043 PNPLA7Q6ZV29 1317 aa18.78■□□□□ 0.6
HIF3A-214ENST00000531043 SYTL4Q96C24 671 aaPredicted RBP18.78■□□□□ 0.6
HIF3A-214ENST00000531043 COG3Q96JB2 828 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms