RNA–Protein interactions for RNA: ENST00000531026.5

RSF1-209, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene RSF1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-209ENST00000531026 PPP1R26Q5T8A7 1209 aaPredicted RBP11.51□□□□□ -0.57
RSF1-209ENST00000531026 PDXDC2PQ6P474 469 aa11.51□□□□□ -0.57
RSF1-209ENST00000531026 SLC10A4Q96EP9 437 aa11.51□□□□□ -0.57
RSF1-209ENST00000531026 CDV3Q9UKY7 258 aaKnown RBP11.5□□□□□ -0.57
RSF1-209ENST00000531026 ATP1B4Q9UN42 357 aaPredicted RBP11.5□□□□□ -0.57
RSF1-209ENST00000531026 ZBTB33Q86T24 672 aa11.49□□□□□ -0.57
RSF1-209ENST00000531026 FKBPLQ9UIM3 349 aa11.49□□□□□ -0.57
RSF1-209ENST00000531026 DHX9Q08211 1270 aaKnown RBP11.48□□□□□ -0.57
RSF1-209ENST00000531026 KCTD15Q96SI1 283 aaPredicted RBP11.48□□□□□ -0.57
RSF1-209ENST00000531026 FIGNL2A6NMB9 653 aa11.47□□□□□ -0.57
RSF1-209ENST00000531026 PTSQ03393 145 aa11.47□□□□□ -0.57
RSF1-209ENST00000531026 CBLBQ13191 982 aa11.47□□□□□ -0.57
RSF1-209ENST00000531026 Q6ZVU0 165 aa11.46□□□□□ -0.57
RSF1-209ENST00000531026 LRRN4Q8WUT4 740 aa11.46□□□□□ -0.57
RSF1-209ENST00000531026 ZC3H4Q9UPT8 1303 aaKnown RBP11.45□□□□□ -0.58
RSF1-209ENST00000531026 SPINT1O43278 529 aa11.45□□□□□ -0.58
RSF1-209ENST00000531026 PTK2Q05397 1052 aa11.43□□□□□ -0.58
RSF1-209ENST00000531026 NR6A1Q15406 480 aa11.43□□□□□ -0.58
RSF1-209ENST00000531026 CNTNAP3BQ96NU0 1288 aa11.43□□□□□ -0.58
RSF1-209ENST00000531026 CNTNAP3Q9BZ76 1288 aa11.43□□□□□ -0.58
RSF1-209ENST00000531026 SKIV2LQ15477 1246 aaKnown RBP11.42□□□□□ -0.58
RSF1-209ENST00000531026 CCDC155Q8N6L0 562 aa11.41□□□□□ -0.58
RSF1-209ENST00000531026 RELBQ01201 579 aa11.4□□□□□ -0.58
RSF1-209ENST00000531026 INTS6LQ5JSJ4 861 aaKnown RBP11.4□□□□□ -0.58
RSF1-209ENST00000531026 GPR161Q8N6U8 529 aaKnown RBP11.4□□□□□ -0.58
RSF1-209ENST00000531026 PNMA1Q8ND90 353 aa11.4□□□□□ -0.58
RSF1-209ENST00000531026 KCNMA1Q12791 1236 aa11.39□□□□□ -0.59
RSF1-209ENST00000531026 NBPF20Q3BBV1 942 aa11.39□□□□□ -0.59
RSF1-209ENST00000531026 SH3D19Q5HYK7 790 aa11.39□□□□□ -0.59
RSF1-209ENST00000531026 COL25A1Q9BXS0 654 aaPredicted RBP11.39□□□□□ -0.59
RSF1-209ENST00000531026 GPSM3Q9Y4H4 160 aa11.39□□□□□ -0.59
RSF1-209ENST00000531026 AP1G2O75843 785 aa11.38□□□□□ -0.59
RSF1-209ENST00000531026 KRT76Q01546 638 aa11.38□□□□□ -0.59
RSF1-209ENST00000531026 NANOS1Q8WY41 292 aaKnown RBP11.38□□□□□ -0.59
RSF1-209ENST00000531026 DDRGK1Q96HY6 314 aa11.38□□□□□ -0.59
RSF1-209ENST00000531026 AGBL1Q96MI9 1066 aa11.38□□□□□ -0.59
RSF1-209ENST00000531026 POLMQ9NP87 494 aaPredicted RBP11.38□□□□□ -0.59
RSF1-209ENST00000531026 ADAM32Q8TC27 787 aa11.37□□□□□ -0.59
RSF1-209ENST00000531026 CDC14CA4D256 554 aa11.36□□□□□ -0.59
RSF1-209ENST00000531026 SLC35F4A4IF30 521 aa11.36□□□□□ -0.59
RSF1-209ENST00000531026 RNF225M0QZC1 329 aaPredicted RBP11.36□□□□□ -0.59
RSF1-209ENST00000531026 CTSOP43234 321 aaPredicted RBP11.36□□□□□ -0.59
RSF1-209ENST00000531026 PPP2R2DQ66LE6 453 aa11.36□□□□□ -0.59
RSF1-209ENST00000531026 PROCA1Q8NCQ7 364 aaPredicted RBP11.36□□□□□ -0.59
RSF1-209ENST00000531026 INSM2Q96T92 566 aaPredicted RBP11.36□□□□□ -0.59
RSF1-209ENST00000531026 ITGA6P23229 1130 aa11.35□□□□□ -0.59
RSF1-209ENST00000531026 RAB15P59190 212 aa11.35□□□□□ -0.59
RSF1-209ENST00000531026 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.35□□□□□ -0.59
RSF1-209ENST00000531026 KDM4CQ9H3R0 1056 aa11.34□□□□□ -0.59
RSF1-209ENST00000531026 SV2AQ7L0J3 742 aa11.33□□□□□ -0.6
RSF1-209ENST00000531026 DZIP3Q86Y13 1208 aaKnown RBP11.33□□□□□ -0.6
RSF1-209ENST00000531026 VWA5B2Q8N398 1253 aa11.33□□□□□ -0.6
RSF1-209ENST00000531026 SVOPQ8N4V2 548 aa11.33□□□□□ -0.6
RSF1-209ENST00000531026 OCSTAMPQ9BR26 566 aa11.33□□□□□ -0.6
RSF1-209ENST00000531026 ZNF395Q9H8N7 513 aaPredicted RBP11.33□□□□□ -0.6
RSF1-209ENST00000531026 ADAMTS8Q9UP79 889 aa11.33□□□□□ -0.6
RSF1-209ENST00000531026 FBXO31Q5XUX0 539 aaPredicted RBP11.32□□□□□ -0.6
RSF1-209ENST00000531026 GPBP1L1Q9HC44 474 aaPredicted RBP11.32□□□□□ -0.6
RSF1-209ENST00000531026 TMPRSS4Q9NRS4 437 aa11.32□□□□□ -0.6
RSF1-209ENST00000531026 RNFT1Q5M7Z0 435 aa11.31□□□□□ -0.6
RSF1-209ENST00000531026 TMEM151AQ8N4L1 468 aa11.31□□□□□ -0.6
RSF1-209ENST00000531026 KCTD17Q8N5Z5 321 aa11.31□□□□□ -0.6
RSF1-209ENST00000531026 ZNF784Q8NCA9 323 aaPredicted RBP11.31□□□□□ -0.6
RSF1-209ENST00000531026 FAM117AQ9C073 453 aa11.31□□□□□ -0.6
RSF1-209ENST00000531026 ADH1AP07327 375 aa11.3□□□□□ -0.6
RSF1-209ENST00000531026 RNF217Q8TC41 542 aa11.3□□□□□ -0.6
RSF1-209ENST00000531026 GDF11O95390 407 aa11.29□□□□□ -0.6
RSF1-209ENST00000531026 RASSF7Q02833 373 aa11.29□□□□□ -0.6
RSF1-209ENST00000531026 EPS8L1Q8TE68 723 aa11.29□□□□□ -0.6
RSF1-209ENST00000531026 TRIM52Q96A61 297 aa11.29□□□□□ -0.6
RSF1-209ENST00000531026 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
RSF1-209ENST00000531026 ZNF385CQ66K41 422 aaPredicted RBP11.28□□□□□ -0.6
RSF1-209ENST00000531026 ERVH48-1M5A8F1 160 aa11.27□□□□□ -0.61
RSF1-209ENST00000531026 GSK3AP49840 483 aa11.27□□□□□ -0.61
RSF1-209ENST00000531026 HMX1Q9NP08 348 aaPredicted RBP11.27□□□□□ -0.61
RSF1-209ENST00000531026 SLURP2P0DP57 97 aa11.25□□□□□ -0.61
RSF1-209ENST00000531026 PTGIRP43119 386 aa11.25□□□□□ -0.61
RSF1-209ENST00000531026 LILRA1O75019 489 aa11.24□□□□□ -0.61
RSF1-209ENST00000531026 ADD1P35611 737 aaKnown RBP11.24□□□□□ -0.61
RSF1-209ENST00000531026 LYSMD3Q7Z3D4 306 aa11.24□□□□□ -0.61
RSF1-209ENST00000531026 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
RSF1-209ENST00000531026 MARSP56192 900 aaKnown RBP11.23□□□□□ -0.61
RSF1-209ENST00000531026 FOXD4L5Q5VV16 416 aaPredicted RBP11.23□□□□□ -0.61
RSF1-209ENST00000531026 SEPT12Q8IYM1 358 aa11.23□□□□□ -0.61
RSF1-209ENST00000531026 ESPNB1AK53 854 aa11.22□□□□□ -0.61
RSF1-209ENST00000531026 WHAMMQ8TF30 809 aa11.22□□□□□ -0.61
RSF1-209ENST00000531026 RFC5P40937 340 aa11.21□□□□□ -0.61
RSF1-209ENST00000531026 CYLDQ9NQC7 956 aa11.21□□□□□ -0.61
RSF1-209ENST00000531026 ADAMTS2O95450 1211 aa11.2□□□□□ -0.62
RSF1-209ENST00000531026 SUZ12Q15022 739 aaKnown RBP11.2□□□□□ -0.62
RSF1-209ENST00000531026 MAP3K10Q02779 954 aa11.19□□□□□ -0.62
RSF1-209ENST00000531026 PRICKLE2Q7Z3G6 844 aa11.19□□□□□ -0.62
RSF1-209ENST00000531026 KDF1Q8NAX2 398 aaPredicted RBP11.19□□□□□ -0.62
RSF1-209ENST00000531026 ARHGEF15O94989 841 aa11.18□□□□□ -0.62
RSF1-209ENST00000531026 IRS1P35568 1242 aa11.18□□□□□ -0.62
RSF1-209ENST00000531026 LOC100996750A0A140TA64 210 aa11.17□□□□□ -0.62
RSF1-209ENST00000531026 SRSF11Q05519 484 aaKnown RBP11.17□□□□□ -0.62
RSF1-209ENST00000531026 SCARF2Q96GP6 870 aaPredicted RBP11.17□□□□□ -0.62
RSF1-209ENST00000531026 KRTAP4-6Q9BYQ5 205 aa11.17□□□□□ -0.62
RSF1-209ENST00000531026 ATP5J2-PTCD1G3V325 749 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms