RNA–Protein interactions for RNA: ENST00000531026.5

RSF1-209, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene RSF1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-209ENST00000531026 AEBP2Q6ZN18 517 aaPredicted RBP33.8■■■■□ 3
RSF1-209ENST00000531026 CHIC1Q5VXU3 224 aa32.14■■■□□ 2.74
RSF1-209ENST00000531026 SENP3Q9H4L4 574 aaPredicted RBP28.95■■■□□ 2.22
RSF1-209ENST00000531026 PHF23Q9BUL5 403 aaPredicted RBP28.53■■■□□ 2.16
RSF1-209ENST00000531026 FOXD1Q16676 465 aa26.91■■□□□ 1.9
RSF1-209ENST00000531026 PLPPR3Q6T4P5 718 aa25.74■■□□□ 1.71
RSF1-209ENST00000531026 MSH5O43196 834 aa25.28■■□□□ 1.64
RSF1-209ENST00000531026 PIAS4Q8N2W9 510 aaPredicted RBP25.22■■□□□ 1.63
RSF1-209ENST00000531026 PPP6R1Q9UPN7 881 aa25.12■■□□□ 1.61
RSF1-209ENST00000531026 ADRA2BP18089 450 aa25.08■■□□□ 1.61
RSF1-209ENST00000531026 POTEDQ86YR6 584 aa24.63■■□□□ 1.53
RSF1-209ENST00000531026 SCAF1Q9H7N4 1312 aaKnown RBP23.07■■□□□ 1.28
RSF1-209ENST00000531026 MAPK8IP2Q13387 824 aaPredicted RBP23.02■■□□□ 1.28
RSF1-209ENST00000531026 DMRT2Q9Y5R5 561 aa22.91■■□□□ 1.26
RSF1-209ENST00000531026 PPP4R3CPQ6ZMV5 832 aa22.53■■□□□ 1.2
RSF1-209ENST00000531026 CNKSR2Q8WXI2 1034 aa22.13■■□□□ 1.13
RSF1-209ENST00000531026 DCAF8L1A6NGE4 600 aa22.09■■□□□ 1.13
RSF1-209ENST00000531026 HOXD11P31277 338 aaPredicted RBP22.05■■□□□ 1.12
RSF1-209ENST00000531026 RNF216Q9NWF9 866 aaPredicted RBP21.91■■□□□ 1.1
RSF1-209ENST00000531026 NCBP3Q53F19 620 aaKnown RBP21.73■■□□□ 1.07
RSF1-209ENST00000531026 CACNB1Q02641 598 aaPredicted RBP21.71■■□□□ 1.07
RSF1-209ENST00000531026 RNF39Q9H2S5 420 aa21.5■■□□□ 1.03
RSF1-209ENST00000531026 NPM3O75607 178 aaKnown RBP21.32■■□□□ 1
RSF1-209ENST00000531026 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
RSF1-209ENST00000531026 C1QBPQ07021 282 aaKnown RBP21.24■□□□□ 0.99
RSF1-209ENST00000531026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.11■□□□□ 0.972e-9■■■■■ 30.3
RSF1-209ENST00000531026 KCNA4P22459 653 aa20.9■□□□□ 0.94
RSF1-209ENST00000531026 U3KPZ7 1027 aaPredicted RBP20.57■□□□□ 0.88
RSF1-209ENST00000531026 CAPN15O75808 1086 aa20.33■□□□□ 0.85
RSF1-209ENST00000531026 SLC4A2P04920 1241 aa20.33■□□□□ 0.85
RSF1-209ENST00000531026 SPINK5Q9NQ38 1064 aaPredicted RBP20.28■□□□□ 0.84
RSF1-209ENST00000531026 DSG3P32926 999 aa20.14■□□□□ 0.81
RSF1-209ENST00000531026 APLP2Q06481 763 aa20.14■□□□□ 0.81
RSF1-209ENST00000531026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.1■□□□□ 0.81
RSF1-209ENST00000531026 HNRNPUL2Q1KMD3 747 aaKnown RBP20.1■□□□□ 0.81
RSF1-209ENST00000531026 TRHP20396 242 aaPredicted RBP20■□□□□ 0.79
RSF1-209ENST00000531026 SAMD1Q6SPF0 538 aaPredicted RBP19.96■□□□□ 0.79
RSF1-209ENST00000531026 ZNF219Q9P2Y4 722 aaPredicted RBP19.96■□□□□ 0.79
RSF1-209ENST00000531026 ABCB7O75027 752 aa19.82■□□□□ 0.76
RSF1-209ENST00000531026 SLC4A1APQ9BWU0 796 aaKnown RBP19.78■□□□□ 0.76
RSF1-209ENST00000531026 MYCNP04198 464 aaPredicted RBP19.77■□□□□ 0.76
RSF1-209ENST00000531026 FOXD4L1Q9NU39 408 aa19.55■□□□□ 0.72
RSF1-209ENST00000531026 POLA2Q14181 598 aa19.43■□□□□ 0.7
RSF1-209ENST00000531026 POTEHQ6S545 545 aa19.33■□□□□ 0.68
RSF1-209ENST00000531026 RBM42Q9BTD8 480 aaKnown RBP19.31■□□□□ 0.68
RSF1-209ENST00000531026 ATF5Q9Y2D1 282 aaPredicted RBP19.23■□□□□ 0.67
RSF1-209ENST00000531026 ZBTB22O15209 634 aa19.15■□□□□ 0.66
RSF1-209ENST00000531026 ZBTB12Q9Y330 459 aaPredicted RBP19.09■□□□□ 0.65
RSF1-209ENST00000531026 ATXN8OSP0DMR3 200 aa18.95■□□□□ 0.62
RSF1-209ENST00000531026 CHRDL2Q6WN34 429 aa18.84■□□□□ 0.61
RSF1-209ENST00000531026 AKT1S1Q96B36 256 aa18.82■□□□□ 0.6
RSF1-209ENST00000531026 OSCARQ8IYS5 282 aa18.8■□□□□ 0.6
RSF1-209ENST00000531026 FBLN2P98095 1184 aa18.63■□□□□ 0.57
RSF1-209ENST00000531026 REM2Q8IYK8 340 aaPredicted RBP18.62■□□□□ 0.57
RSF1-209ENST00000531026 SPDYE2BA6NHP3 402 aa18.46■□□□□ 0.55
RSF1-209ENST00000531026 SPDYE6P0CI01 402 aa18.46■□□□□ 0.55
RSF1-209ENST00000531026 SPDYE2Q495Y8 402 aa18.46■□□□□ 0.55
RSF1-209ENST00000531026 PITPNM1O00562 1244 aa18.41■□□□□ 0.54
RSF1-209ENST00000531026 PIP4P2Q8N4L2 257 aa18.36■□□□□ 0.53
RSF1-209ENST00000531026 MKRN4PQ13434 485 aaPredicted RBP18.34■□□□□ 0.53
RSF1-209ENST00000531026 CSRNP3Q8WYN3 585 aa18.3■□□□□ 0.52
RSF1-209ENST00000531026 ZNF692Q9BU19 519 aaPredicted RBP18.25■□□□□ 0.51
RSF1-209ENST00000531026 FXR2P51116 673 aaKnown RBP eCLIP18.24■□□□□ 0.51
RSF1-209ENST00000531026 SPDYE1Q8NFV5 336 aaPredicted RBP18.16■□□□□ 0.5
RSF1-209ENST00000531026 CLEC11AQ9Y240 323 aa18.15■□□□□ 0.5
RSF1-209ENST00000531026 SSUH2Q9Y2M2 353 aa18.15■□□□□ 0.5
RSF1-209ENST00000531026 EHMT2Q96KQ7 1210 aa18.13■□□□□ 0.49
RSF1-209ENST00000531026 SP7Q8TDD2 431 aaPredicted RBP18.12■□□□□ 0.49
RSF1-209ENST00000531026 HAX1O00165 279 aa18.11■□□□□ 0.49
RSF1-209ENST00000531026 PRKAR2AP13861 404 aaKnown RBP17.97■□□□□ 0.47
RSF1-209ENST00000531026 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
RSF1-209ENST00000531026 PRR29P0C7W0 189 aa17.84■□□□□ 0.45
RSF1-209ENST00000531026 EVX2Q03828 476 aa17.75■□□□□ 0.43
RSF1-209ENST00000531026 CHADLQ6NUI6 762 aa17.74■□□□□ 0.43
RSF1-209ENST00000531026 C19orf67A6NJJ6 358 aa17.65■□□□□ 0.42
RSF1-209ENST00000531026 SPDYE4A6NLX3 237 aa17.56■□□□□ 0.4
RSF1-209ENST00000531026 STAG3Q9UJ98 1225 aa17.51■□□□□ 0.39
RSF1-209ENST00000531026 FARP1Q9Y4F1 1045 aaPredicted RBP17.49■□□□□ 0.39
RSF1-209ENST00000531026 GABBR2O75899 941 aa17.41■□□□□ 0.38
RSF1-209ENST00000531026 CD44P16070 742 aaKnown RBP17.41■□□□□ 0.38
RSF1-209ENST00000531026 CREBZFQ9NS37 354 aa17.31■□□□□ 0.36
RSF1-209ENST00000531026 CLCN6P51797 869 aa17.21■□□□□ 0.35
RSF1-209ENST00000531026 ZRANB1Q9UGI0 708 aa17.17■□□□□ 0.34
RSF1-209ENST00000531026 ZNF579Q8NAF0 562 aaKnown RBP17.11■□□□□ 0.33
RSF1-209ENST00000531026 PAK3O75914 559 aaPredicted RBP17.1■□□□□ 0.33
RSF1-209ENST00000531026 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
RSF1-209ENST00000531026 PROM2Q8N271 834 aa17.04■□□□□ 0.32
RSF1-209ENST00000531026 DCBLD2Q96PD2 775 aa17.03■□□□□ 0.32
RSF1-209ENST00000531026 LHX8Q68G74 356 aa17■□□□□ 0.31
RSF1-209ENST00000531026 POTEIP0CG38 1075 aa16.98■□□□□ 0.31
RSF1-209ENST00000531026 MNX1P50219 401 aaPredicted RBP16.97■□□□□ 0.31
RSF1-209ENST00000531026 GALR2O43603 387 aaPredicted RBP16.89■□□□□ 0.29
RSF1-209ENST00000531026 PHF12Q96QT6 1004 aa16.89■□□□□ 0.29
RSF1-209ENST00000531026 PLEKHG5O94827 1062 aa16.87■□□□□ 0.29
RSF1-209ENST00000531026 MIER1Q8N108 512 aa16.8■□□□□ 0.28
RSF1-209ENST00000531026 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
RSF1-209ENST00000531026 PLCD3Q8N3E9 789 aa16.68■□□□□ 0.26
RSF1-209ENST00000531026 FKBP8Q14318 412 aa16.67■□□□□ 0.26
RSF1-209ENST00000531026 MS4A3Q96HJ5 214 aa16.66■□□□□ 0.26
RSF1-209ENST00000531026 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms