RNA–Protein interactions for RNA: ENST00000530981.1

SF3B2-210, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-210ENST00000530981 AMER1Q5JTC6 1135 aaPredicted RBP12.71□□□□□ -0.37
SF3B2-210ENST00000530981 STRN4Q9NRL3 753 aa12.71□□□□□ -0.37
SF3B2-210ENST00000530981 PEAK1Q9H792 1746 aa12.71□□□□□ -0.38
SF3B2-210ENST00000530981 MAP3K19Q56UN5 1328 aa12.7□□□□□ -0.38
SF3B2-210ENST00000530981 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
SF3B2-210ENST00000530981 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
SF3B2-210ENST00000530981 KCNH5Q8NCM2 988 aa12.7□□□□□ -0.38
SF3B2-210ENST00000530981 COG3Q96JB2 828 aa12.7□□□□□ -0.38
SF3B2-210ENST00000530981 SPATA31A1Q5TZJ5 1347 aa12.68□□□□□ -0.38
SF3B2-210ENST00000530981 EMILIN1Q9Y6C2 1016 aa12.68□□□□□ -0.38
SF3B2-210ENST00000530981 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
SF3B2-210ENST00000530981 CGNL1Q0VF96 1302 aa12.67□□□□□ -0.38
SF3B2-210ENST00000530981 ONECUT3O60422 494 aaPredicted RBP12.67□□□□□ -0.38
SF3B2-210ENST00000530981 TNNT2P45379 298 aaPredicted RBP12.67□□□□□ -0.38
SF3B2-210ENST00000530981 FAM98CQ17RN3 349 aaKnown RBP12.67□□□□□ -0.38
SF3B2-210ENST00000530981 USP35Q9P2H5 1018 aa12.67□□□□□ -0.38
SF3B2-210ENST00000530981 ANKRD26Q9UPS8 1709 aa12.66□□□□□ -0.38
SF3B2-210ENST00000530981 HOXC9P31274 260 aa12.66□□□□□ -0.38
SF3B2-210ENST00000530981 ZEB1P37275 1124 aaPredicted RBP12.66□□□□□ -0.38
SF3B2-210ENST00000530981 IP6K1Q92551 441 aa12.66□□□□□ -0.38
SF3B2-210ENST00000530981 CCDC9Q9Y3X0 531 aaKnown RBP12.66□□□□□ -0.38
SF3B2-210ENST00000530981 RGPD2P0DJD1 1756 aa12.66□□□□□ -0.38
SF3B2-210ENST00000530981 CDK12Q9NYV4 1490 aaPredicted RBP12.65□□□□□ -0.38
SF3B2-210ENST00000530981 MAP2P11137 1827 aaKnown RBP12.65□□□□□ -0.38
SF3B2-210ENST00000530981 EVA1CP58658 441 aa12.65□□□□□ -0.38
SF3B2-210ENST00000530981 HSP90AB2PQ58FF8 381 aa12.65□□□□□ -0.38
SF3B2-210ENST00000530981 POLKQ9UBT6 870 aa12.65□□□□□ -0.38
SF3B2-210ENST00000530981 EP400Q96L91 3159 aa12.65□□□□□ -0.39
SF3B2-210ENST00000530981 THSD7AQ9UPZ6 1657 aa12.64□□□□□ -0.39
SF3B2-210ENST00000530981 CNGB1Q14028 1251 aaPredicted RBP12.64□□□□□ -0.39
SF3B2-210ENST00000530981 CC2D1BQ5T0F9 858 aaKnown RBP12.64□□□□□ -0.39
SF3B2-210ENST00000530981 SEPT12Q8IYM1 358 aa12.64□□□□□ -0.39
SF3B2-210ENST00000530981 LTV1Q96GA3 475 aaPredicted RBP12.64□□□□□ -0.39
SF3B2-210ENST00000530981 KNSTRNQ9Y448 316 aa12.64□□□□□ -0.39
SF3B2-210ENST00000530981 ERBB3P21860 1342 aa12.63□□□□□ -0.39
SF3B2-210ENST00000530981 WDR17Q8IZU2 1322 aa12.63□□□□□ -0.39
SF3B2-210ENST00000530981 FAM182BQ5T319 152 aa12.63□□□□□ -0.39
SF3B2-210ENST00000530981 ANKRD24Q8TF21 1146 aa12.63□□□□□ -0.39
SF3B2-210ENST00000530981 CRB1P82279 1406 aa12.62□□□□□ -0.39
SF3B2-210ENST00000530981 ABCC6O95255 1503 aa12.62□□□□□ -0.39
SF3B2-210ENST00000530981 SOCS7O14512 581 aa12.61□□□□□ -0.39
SF3B2-210ENST00000530981 AMPHP49418 695 aa12.61□□□□□ -0.39
SF3B2-210ENST00000530981 DDX10Q13206 875 aaKnown RBP12.61□□□□□ -0.39
SF3B2-210ENST00000530981 TOM1L2Q6ZVM7 507 aa12.61□□□□□ -0.39
SF3B2-210ENST00000530981 TCP11L2Q8N4U5 519 aa12.61□□□□□ -0.39
SF3B2-210ENST00000530981 PPM1GO15355 546 aaPredicted RBP12.6□□□□□ -0.39
SF3B2-210ENST00000530981 NBPF6Q5VWK0 638 aa12.6□□□□□ -0.39
SF3B2-210ENST00000530981 BARGINQ6ZT62 677 aa12.6□□□□□ -0.39
SF3B2-210ENST00000530981 MORC1Q86VD1 984 aa12.6□□□□□ -0.39
SF3B2-210ENST00000530981 NBPF4Q96M43 638 aa12.6□□□□□ -0.39
SF3B2-210ENST00000530981 CARD10Q9BWT7 1032 aa12.6□□□□□ -0.39
SF3B2-210ENST00000530981 DISP2A7MBM2 1401 aa12.6□□□□□ -0.39
SF3B2-210ENST00000530981 FAM208AQ9UK61 1670 aaKnown RBP12.6□□□□□ -0.39
SF3B2-210ENST00000530981 NSD2O96028 1365 aa12.59□□□□□ -0.39
SF3B2-210ENST00000530981 CSB-PGBD3P0DP91 1061 aa12.59□□□□□ -0.39
SF3B2-210ENST00000530981 USHBP1Q8N6Y0 703 aa12.59□□□□□ -0.39
SF3B2-210ENST00000530981 NLRP2Q9NX02 1062 aa12.59□□□□□ -0.39
SF3B2-210ENST00000530981 BLMP54132 1417 aaPredicted RBP12.59□□□□□ -0.39
SF3B2-210ENST00000530981 INSRP06213 1382 aa12.58□□□□□ -0.4
SF3B2-210ENST00000530981 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
SF3B2-210ENST00000530981 RTL1A6NKG5 1358 aa12.57□□□□□ -0.4
SF3B2-210ENST00000530981 FLT4P35916 1363 aa12.57□□□□□ -0.4
SF3B2-210ENST00000530981 NPC1L1Q9UHC9 1359 aa12.57□□□□□ -0.4
SF3B2-210ENST00000530981 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
SF3B2-210ENST00000530981 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.4
SF3B2-210ENST00000530981 LRRC37A3O60309 1634 aa12.56□□□□□ -0.4
SF3B2-210ENST00000530981 EIF4A2Q14240 407 aaKnown RBP12.56□□□□□ -0.4
SF3B2-210ENST00000530981 KRT27Q7Z3Y8 459 aa12.56□□□□□ -0.4
SF3B2-210ENST00000530981 PARP4Q9UKK3 1724 aaKnown RBP12.56□□□□□ -0.4
SF3B2-210ENST00000530981 A0A0G2JS52 829 aa12.55□□□□□ -0.4
SF3B2-210ENST00000530981 MTHFSP49914 203 aa12.55□□□□□ -0.4
SF3B2-210ENST00000530981 MYT1Q01538 1121 aa12.55□□□□□ -0.4
SF3B2-210ENST00000530981 PTF1AQ7RTS3 328 aa12.55□□□□□ -0.4
SF3B2-210ENST00000530981 THRAP3Q9Y2W1 955 aaKnown RBP12.55□□□□□ -0.4
SF3B2-210ENST00000530981 KIF24Q5T7B8 1368 aa12.55□□□□□ -0.4
SF3B2-210ENST00000530981 MEGF6O75095 1541 aa12.54□□□□□ -0.4
SF3B2-210ENST00000530981 MARCH10Q8NA82 808 aaPredicted RBP12.54□□□□□ -0.4
SF3B2-210ENST00000530981 EYA1Q99502 592 aa12.54□□□□□ -0.4
SF3B2-210ENST00000530981 NCAPD2Q15021 1401 aa12.53□□□□□ -0.4
SF3B2-210ENST00000530981 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
SF3B2-210ENST00000530981 SHANK3Q9BYB0 1731 aa12.52□□□□□ -0.41
SF3B2-210ENST00000530981 ZNF316A6NFI3 1004 aaPredicted RBP12.52□□□□□ -0.41
SF3B2-210ENST00000530981 PPP2R1AP30153 589 aa12.52□□□□□ -0.41
SF3B2-210ENST00000530981 IL13P35225 146 aa12.52□□□□□ -0.41
SF3B2-210ENST00000530981 AEBP1Q8IUX7 1158 aa12.52□□□□□ -0.41
SF3B2-210ENST00000530981 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
SF3B2-210ENST00000530981 IL2RBP14784 551 aa12.51□□□□□ -0.41
SF3B2-210ENST00000530981 DDB1Q16531 1140 aa12.5□□□□□ -0.41
SF3B2-210ENST00000530981 PARD3Q8TEW0 1356 aa12.5□□□□□ -0.41
SF3B2-210ENST00000530981 TNS2Q63HR2 1409 aa12.48□□□□□ -0.41
SF3B2-210ENST00000530981 IGSF1Q8N6C5 1336 aa12.48□□□□□ -0.41
SF3B2-210ENST00000530981 PDE3BQ13370 1112 aa12.48□□□□□ -0.41
SF3B2-210ENST00000530981 SBF2Q86WG5 1849 aa12.48□□□□□ -0.41
SF3B2-210ENST00000530981 OVOS2A0A0G2JMS6 1433 aa12.47□□□□□ -0.41
SF3B2-210ENST00000530981 EXOC5O00471 708 aa12.47□□□□□ -0.41
SF3B2-210ENST00000530981 KCNQ2O43526 872 aa12.47□□□□□ -0.41
SF3B2-210ENST00000530981 TRIM37O94972 964 aa12.47□□□□□ -0.41
SF3B2-210ENST00000530981 DEFB132Q7Z7B7 95 aa12.47□□□□□ -0.41
SF3B2-210ENST00000530981 CDCA7Q9BWT1 371 aaPredicted RBP12.47□□□□□ -0.41
SF3B2-210ENST00000530981 TNS1Q9HBL0 1735 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms