RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 PLSCR1O15162 318 aa25.94■■□□□ 1.74
PSMC3-208ENST00000530887 BCL9O00512 1426 aa25.94■■□□□ 1.74
PSMC3-208ENST00000530887 RGPD3A6NKT7 1758 aaPredicted RBP25.94■■□□□ 1.74
PSMC3-208ENST00000530887 AKAP12Q02952 1782 aa25.94■■□□□ 1.74
PSMC3-208ENST00000530887 RGPD4Q7Z3J3 1758 aa25.94■■□□□ 1.74
PSMC3-208ENST00000530887 SIN3AQ96ST3 1273 aa25.93■■□□□ 1.74
PSMC3-208ENST00000530887 NEUROD1Q13562 356 aa25.92■■□□□ 1.74
PSMC3-208ENST00000530887 CARD10Q9BWT7 1032 aa25.92■■□□□ 1.74
PSMC3-208ENST00000530887 KTN1Q86UP2 1357 aaKnown RBP25.92■■□□□ 1.74
PSMC3-208ENST00000530887 COL18A1P39060 1754 aa25.92■■□□□ 1.74
PSMC3-208ENST00000530887 NUP188Q5SRE5 1749 aa25.91■■□□□ 1.74
PSMC3-208ENST00000530887 BCL11BQ9C0K0 894 aaPredicted RBP25.9■■□□□ 1.74
PSMC3-208ENST00000530887 CCDC7Q96M83 1385 aa25.9■■□□□ 1.74
PSMC3-208ENST00000530887 SLC24A1O60721 1099 aa25.89■■□□□ 1.74
PSMC3-208ENST00000530887 CSB-PGBD3P0DP91 1061 aa25.89■■□□□ 1.74
PSMC3-208ENST00000530887 LRRC37A3O60309 1634 aa25.88■■□□□ 1.73
PSMC3-208ENST00000530887 PEAK1Q9H792 1746 aa25.88■■□□□ 1.73
PSMC3-208ENST00000530887 PUS7Q96PZ0 661 aaKnown RBP25.87■■□□□ 1.73
PSMC3-208ENST00000530887 USP31Q70CQ4 1352 aa25.86■■□□□ 1.73
PSMC3-208ENST00000530887 CARD11Q9BXL7 1154 aa25.86■■□□□ 1.73
PSMC3-208ENST00000530887 AXIN2Q9Y2T1 843 aa25.86■■□□□ 1.73
PSMC3-208ENST00000530887 HDGFL2Q7Z4V5 671 aaPredicted RBP25.85■■□□□ 1.73
PSMC3-208ENST00000530887 SPON1Q9HCB6 807 aa25.85■■□□□ 1.73
PSMC3-208ENST00000530887 WNK3Q9BYP7 1800 aa25.85■■□□□ 1.73
PSMC3-208ENST00000530887 EXOC5O00471 708 aa25.84■■□□□ 1.73
PSMC3-208ENST00000530887 SBF2Q86WG5 1849 aa25.84■■□□□ 1.73
PSMC3-208ENST00000530887 MON2Q7Z3U7 1717 aa25.83■■□□□ 1.73
PSMC3-208ENST00000530887 NFAT5O94916 1531 aa25.83■■□□□ 1.72
PSMC3-208ENST00000530887 USP54Q70EL1 1684 aa25.81■■□□□ 1.72
PSMC3-208ENST00000530887 DCAF8L1A6NGE4 600 aa25.81■■□□□ 1.72
PSMC3-208ENST00000530887 TERF2IPQ9NYB0 399 aa25.81■■□□□ 1.72
PSMC3-208ENST00000530887 KCNQ2O43526 872 aa25.8■■□□□ 1.72
PSMC3-208ENST00000530887 PPP1R1BQ9UD71 204 aaPredicted RBP25.8■■□□□ 1.72
PSMC3-208ENST00000530887 TONSLQ96HA7 1378 aa25.8■■□□□ 1.72
PSMC3-208ENST00000530887 NINLQ9Y2I6 1382 aa25.8■■□□□ 1.72
PSMC3-208ENST00000530887 MARCH10Q8NA82 808 aaPredicted RBP25.79■■□□□ 1.72
PSMC3-208ENST00000530887 SOX12O15370 315 aa25.78■■□□□ 1.72
PSMC3-208ENST00000530887 EDC4Q6P2E9 1401 aaKnown RBP25.78■■□□□ 1.72
PSMC3-208ENST00000530887 TNS2Q63HR2 1409 aa25.77■■□□□ 1.72
PSMC3-208ENST00000530887 TMC1Q8TDI8 760 aa25.76■■□□□ 1.71
PSMC3-208ENST00000530887 RGPD5Q99666 1765 aa25.75■■□□□ 1.71
PSMC3-208ENST00000530887 ERBB3P21860 1342 aa25.75■■□□□ 1.71
PSMC3-208ENST00000530887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.75■■□□□ 1.71
PSMC3-208ENST00000530887 IL2RBP14784 551 aa25.71■■□□□ 1.71
PSMC3-208ENST00000530887 STK32BQ9NY57 414 aa25.71■■□□□ 1.71
PSMC3-208ENST00000530887 CD163L1Q9NR16 1453 aa25.71■■□□□ 1.71
PSMC3-208ENST00000530887 NLRP2Q9NX02 1062 aa25.7■■□□□ 1.7
PSMC3-208ENST00000530887 NME9Q86XW9 330 aa25.69■■□□□ 1.7
PSMC3-208ENST00000530887 TXNRD1Q16881 649 aa25.68■■□□□ 1.7
PSMC3-208ENST00000530887 SLC12A5Q9H2X9 1139 aa25.67■■□□□ 1.7
PSMC3-208ENST00000530887 LTN1O94822 1766 aa25.67■■□□□ 1.7
PSMC3-208ENST00000530887 ANKRD24Q8TF21 1146 aa25.66■■□□□ 1.7
PSMC3-208ENST00000530887 A0A1W2PP64 1363 aa25.66■■□□□ 1.7
PSMC3-208ENST00000530887 PROM2Q8N271 834 aa25.65■■□□□ 1.7
PSMC3-208ENST00000530887 ANO8Q9HCE9 1232 aaPredicted RBP25.65■■□□□ 1.7
PSMC3-208ENST00000530887 NHSQ6T4R5 1651 aa25.64■■□□□ 1.7
PSMC3-208ENST00000530887 FAM208AQ9UK61 1670 aaKnown RBP25.64■■□□□ 1.69
PSMC3-208ENST00000530887 CASZ1Q86V15 1759 aa25.64■■□□□ 1.69
PSMC3-208ENST00000530887 SLC15A2Q16348 729 aa25.63■■□□□ 1.69
PSMC3-208ENST00000530887 IP6K1Q92551 441 aa25.63■■□□□ 1.69
PSMC3-208ENST00000530887 COG3Q96JB2 828 aa25.61■■□□□ 1.69
PSMC3-208ENST00000530887 PTF1AQ7RTS3 328 aa25.6■■□□□ 1.69
PSMC3-208ENST00000530887 YY1P25490 414 aa25.59■■□□□ 1.69
PSMC3-208ENST00000530887 MTFR1LQ9H019 292 aa25.59■■□□□ 1.69
PSMC3-208ENST00000530887 HMGB2P26583 209 aaKnown RBP25.57■■□□□ 1.68
PSMC3-208ENST00000530887 TESK2Q96S53 571 aa25.57■■□□□ 1.68
PSMC3-208ENST00000530887 ST20-MTHFSA0A0A6YYL1 179 aa25.56■■□□□ 1.68
PSMC3-208ENST00000530887 CDCA8Q53HL2 280 aa25.56■■□□□ 1.68
PSMC3-208ENST00000530887 ANKRD36BQ8N2N9 1353 aa25.56■■□□□ 1.68
PSMC3-208ENST00000530887 SLC27A3Q5K4L6 730 aa25.55■■□□□ 1.68
PSMC3-208ENST00000530887 KAT6BQ8WYB5 2073 aa25.55■■□□□ 1.68
PSMC3-208ENST00000530887 RTL1A6NKG5 1358 aa25.55■■□□□ 1.68
PSMC3-208ENST00000530887 ACSBG1Q96GR2 724 aa25.54■■□□□ 1.68
PSMC3-208ENST00000530887 ZBTB7AO95365 584 aa25.53■■□□□ 1.68
PSMC3-208ENST00000530887 AMPHP49418 695 aa25.53■■□□□ 1.68
PSMC3-208ENST00000530887 TMF1P82094 1093 aa25.53■■□□□ 1.68
PSMC3-208ENST00000530887 CGNL1Q0VF96 1302 aa25.52■■□□□ 1.68
PSMC3-208ENST00000530887 PTGER2P43116 358 aa25.51■■□□□ 1.67
PSMC3-208ENST00000530887 BTAF1O14981 1849 aa25.5■■□□□ 1.67
PSMC3-208ENST00000530887 SLC16A10Q8TF71 515 aa25.5■■□□□ 1.67
PSMC3-208ENST00000530887 MAP3K19Q56UN5 1328 aa25.49■■□□□ 1.67
PSMC3-208ENST00000530887 HOXC9P31274 260 aa25.49■■□□□ 1.67
PSMC3-208ENST00000530887 SMG6Q86US8 1419 aaKnown RBP25.48■■□□□ 1.67
PSMC3-208ENST00000530887 ATF5Q9Y2D1 282 aaPredicted RBP25.48■■□□□ 1.67
PSMC3-208ENST00000530887 PAPPAQ13219 1627 aa25.48■■□□□ 1.67
PSMC3-208ENST00000530887 KIF24Q5T7B8 1368 aa25.46■■□□□ 1.67
PSMC3-208ENST00000530887 MAP3K5Q99683 1374 aa25.46■■□□□ 1.67
PSMC3-208ENST00000530887 DDX54Q8TDD1 881 aaKnown RBP25.46■■□□□ 1.67
PSMC3-208ENST00000530887 LTV1Q96GA3 475 aaPredicted RBP25.46■■□□□ 1.67
PSMC3-208ENST00000530887 PDGFDQ9GZP0 370 aaPredicted RBP25.46■■□□□ 1.67
PSMC3-208ENST00000530887 ZCRB1Q8TBF4 217 aaKnown RBP25.45■■□□□ 1.66
PSMC3-208ENST00000530887 MYOM1P52179 1685 aa25.45■■□□□ 1.66
PSMC3-208ENST00000530887 ARXQ96QS3 562 aa25.43■■□□□ 1.66
PSMC3-208ENST00000530887 SGIP1Q9BQI5 828 aa25.43■■□□□ 1.66
PSMC3-208ENST00000530887 SYT17Q9BSW7 474 aa25.43■■□□□ 1.66
PSMC3-208ENST00000530887 USP47Q96K76 1375 aa25.43■■□□□ 1.66
PSMC3-208ENST00000530887 FHDC1Q9C0D6 1143 aaPredicted RBP25.42■■□□□ 1.66
PSMC3-208ENST00000530887 TIMELESSQ9UNS1 1208 aa25.42■■□□□ 1.66
PSMC3-208ENST00000530887 QSER1Q2KHR3 1735 aa25.42■■□□□ 1.66
PSMC3-208ENST00000530887 TRIM26Q12899 539 aaPredicted RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms