RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 BRD4O60885 1362 aaPredicted RBP7.81□□□□□ -1.16
VPS11-204ENST00000530809 QSER1Q2KHR3 1735 aa7.81□□□□□ -1.16
VPS11-204ENST00000530809 NHSQ6T4R5 1651 aa7.8□□□□□ -1.16
VPS11-204ENST00000530809 QRICH2Q9H0J4 1663 aa7.8□□□□□ -1.16
VPS11-204ENST00000530809 COL18A1P39060 1754 aa7.8□□□□□ -1.16
VPS11-204ENST00000530809 SENP3-EIF4A1A0A087X0R7 540 aa7.8□□□□□ -1.16
VPS11-204ENST00000530809 ABTB2Q8N961 1025 aa7.8□□□□□ -1.16
VPS11-204ENST00000530809 ACEP12821 1306 aa7.79□□□□□ -1.16
VPS11-204ENST00000530809 C1QTNF8P60827 252 aa7.79□□□□□ -1.16
VPS11-204ENST00000530809 DDB1Q16531 1140 aa7.79□□□□□ -1.16
VPS11-204ENST00000530809 IFFO2Q5TF58 517 aa7.79□□□□□ -1.16
VPS11-204ENST00000530809 NUTM2GQ5VZR2 741 aa7.79□□□□□ -1.16
VPS11-204ENST00000530809 NLRP13Q86W25 1043 aa7.79□□□□□ -1.16
VPS11-204ENST00000530809 BCL11BQ9C0K0 894 aaPredicted RBP7.79□□□□□ -1.16
VPS11-204ENST00000530809 CCDC61Q9Y6R9 512 aa7.79□□□□□ -1.16
VPS11-204ENST00000530809 AATKQ6ZMQ8 1374 aa7.79□□□□□ -1.16
VPS11-204ENST00000530809 SLIT3O75094 1523 aa7.78□□□□□ -1.16
VPS11-204ENST00000530809 COL24A1Q17RW2 1714 aa7.78□□□□□ -1.16
VPS11-204ENST00000530809 PLEKHG3A1L390 1219 aa7.78□□□□□ -1.16
VPS11-204ENST00000530809 PTGER2P43116 358 aa7.78□□□□□ -1.16
VPS11-204ENST00000530809 CDCA7Q9BWT1 371 aaPredicted RBP7.78□□□□□ -1.16
VPS11-204ENST00000530809 ANO8Q9HCE9 1232 aaPredicted RBP7.78□□□□□ -1.16
VPS11-204ENST00000530809 MAP3K5Q99683 1374 aa7.78□□□□□ -1.16
VPS11-204ENST00000530809 PAPPAQ13219 1627 aa7.78□□□□□ -1.16
VPS11-204ENST00000530809 PIK3C2AO00443 1686 aa7.77□□□□□ -1.17
VPS11-204ENST00000530809 GCP02774 474 aa7.77□□□□□ -1.17
VPS11-204ENST00000530809 ATXN8OSP0DMR3 200 aa7.77□□□□□ -1.17
VPS11-204ENST00000530809 SYT17Q9BSW7 474 aa7.77□□□□□ -1.17
VPS11-204ENST00000530809 FHDC1Q9C0D6 1143 aaPredicted RBP7.77□□□□□ -1.17
VPS11-204ENST00000530809 MTFR1LQ9H019 292 aa7.77□□□□□ -1.17
VPS11-204ENST00000530809 STK32BQ9NY57 414 aa7.77□□□□□ -1.17
VPS11-204ENST00000530809 TRPM1Q7Z4N2 1603 aa7.77□□□□□ -1.17
VPS11-204ENST00000530809 ABCC6O95255 1503 aa7.77□□□□□ -1.17
VPS11-204ENST00000530809 BTAF1O14981 1849 aa7.76□□□□□ -1.17
VPS11-204ENST00000530809 ZBTB7AO95365 584 aa7.76□□□□□ -1.17
VPS11-204ENST00000530809 SLC15A2Q16348 729 aa7.76□□□□□ -1.17
VPS11-204ENST00000530809 DCAF11Q8TEB1 546 aa7.76□□□□□ -1.17
VPS11-204ENST00000530809 CDK19Q9BWU1 502 aa7.76□□□□□ -1.17
VPS11-204ENST00000530809 PPIP5K1Q6PFW1 1433 aa7.76□□□□□ -1.17
VPS11-204ENST00000530809 TXNRD1Q16881 649 aa7.75□□□□□ -1.17
VPS11-204ENST00000530809 TOM1L2Q6ZVM7 507 aa7.75□□□□□ -1.17
VPS11-204ENST00000530809 ATF5Q9Y2D1 282 aaPredicted RBP7.75□□□□□ -1.17
VPS11-204ENST00000530809 KAT6BQ8WYB5 2073 aa7.75□□□□□ -1.17
VPS11-204ENST00000530809 WDR17Q8IZU2 1322 aa7.75□□□□□ -1.17
VPS11-204ENST00000530809 TUBGCP6Q96RT7 1819 aa7.74□□□□□ -1.17
VPS11-204ENST00000530809 GIGYF1O75420 1035 aaPredicted RBP7.74□□□□□ -1.17
VPS11-204ENST00000530809 PROM2Q8N271 834 aa7.74□□□□□ -1.17
VPS11-204ENST00000530809 SGIP1Q9BQI5 828 aa7.74□□□□□ -1.17
VPS11-204ENST00000530809 PDGFDQ9GZP0 370 aaPredicted RBP7.74□□□□□ -1.17
VPS11-204ENST00000530809 KDM2AQ9Y2K7 1162 aa7.74□□□□□ -1.17
VPS11-204ENST00000530809 USP6P35125 1406 aa7.74□□□□□ -1.17
VPS11-204ENST00000530809 CPSF1Q10570 1443 aaKnown RBP7.74□□□□□ -1.17
VPS11-204ENST00000530809 TNS2Q63HR2 1409 aa7.74□□□□□ -1.17
VPS11-204ENST00000530809 SHANK3Q9BYB0 1731 aa7.74□□□□□ -1.17
VPS11-204ENST00000530809 MARCH10Q8NA82 808 aaPredicted RBP7.73□□□□□ -1.17
VPS11-204ENST00000530809 ARXQ96QS3 562 aa7.73□□□□□ -1.17
VPS11-204ENST00000530809 LTN1O94822 1766 aa7.73□□□□□ -1.17
VPS11-204ENST00000530809 USP54Q70EL1 1684 aa7.73□□□□□ -1.17
VPS11-204ENST00000530809 FAM208AQ9UK61 1670 aaKnown RBP7.73□□□□□ -1.17
VPS11-204ENST00000530809 CCDC7Q96M83 1385 aa7.72□□□□□ -1.17
VPS11-204ENST00000530809 ZBTB7CA1YPR0 619 aa7.72□□□□□ -1.17
VPS11-204ENST00000530809 NLRP6P59044 892 aa7.72□□□□□ -1.17
VPS11-204ENST00000530809 CARD10Q9BWT7 1032 aa7.72□□□□□ -1.17
VPS11-204ENST00000530809 EXOC5O00471 708 aa7.71□□□□□ -1.18
VPS11-204ENST00000530809 SRPK2P78362 688 aaKnown RBP7.71□□□□□ -1.18
VPS11-204ENST00000530809 GPR162Q16538 588 aa7.71□□□□□ -1.18
VPS11-204ENST00000530809 PTF1AQ7RTS3 328 aa7.71□□□□□ -1.18
VPS11-204ENST00000530809 KCNH5Q8NCM2 988 aa7.71□□□□□ -1.18
VPS11-204ENST00000530809 SLC16A10Q8TF71 515 aa7.71□□□□□ -1.18
VPS11-204ENST00000530809 LY75O60449 1722 aa7.71□□□□□ -1.18
VPS11-204ENST00000530809 MON2Q7Z3U7 1717 aa7.71□□□□□ -1.18
VPS11-204ENST00000530809 NFAT5O94916 1531 aa7.7□□□□□ -1.18
VPS11-204ENST00000530809 RAB3GAP2Q9H2M9 1393 aa7.7□□□□□ -1.18
VPS11-204ENST00000530809 CSB-PGBD3P0DP91 1061 aa7.69□□□□□ -1.18
VPS11-204ENST00000530809 POLD1P28340 1107 aa7.69□□□□□ -1.18
VPS11-204ENST00000530809 ARHGEF25Q86VW2 580 aa7.69□□□□□ -1.18
VPS11-204ENST00000530809 AXIN2Q9Y2T1 843 aa7.69□□□□□ -1.18
VPS11-204ENST00000530809 CENPJQ9HC77 1338 aaPredicted RBP7.69□□□□□ -1.18
VPS11-204ENST00000530809 ZNF692Q9BU19 519 aaPredicted RBP7.68□□□□□ -1.18
VPS11-204ENST00000530809 DOT1LQ8TEK3 1739 aa7.68□□□□□ -1.18
VPS11-204ENST00000530809 TTC21AQ8NDW8 1320 aa7.68□□□□□ -1.18
VPS11-204ENST00000530809 GRIN3BO60391 1043 aa7.67□□□□□ -1.18
VPS11-204ENST00000530809 SLC27A3Q5K4L6 730 aa7.67□□□□□ -1.18
VPS11-204ENST00000530809 SAMD1Q6SPF0 538 aaPredicted RBP7.67□□□□□ -1.18
VPS11-204ENST00000530809 CABP2Q9NPB3 220 aa7.67□□□□□ -1.18
VPS11-204ENST00000530809 CABP1Q9NZU7 370 aa7.67□□□□□ -1.18
VPS11-204ENST00000530809 TIMELESSQ9UNS1 1208 aa7.66□□□□□ -1.18
VPS11-204ENST00000530809 U3KPZ7 1027 aaPredicted RBP7.66□□□□□ -1.18
VPS11-204ENST00000530809 EVC2Q86UK5 1308 aa7.66□□□□□ -1.18
VPS11-204ENST00000530809 TAF1LQ8IZX4 1826 aa7.66□□□□□ -1.18
VPS11-204ENST00000530809 C5P01031 1676 aa7.65□□□□□ -1.18
VPS11-204ENST00000530809 IL2RBP14784 551 aa7.65□□□□□ -1.18
VPS11-204ENST00000530809 ERBB3P21860 1342 aa7.65□□□□□ -1.18
VPS11-204ENST00000530809 ZNF827Q17R98 1081 aa7.65□□□□□ -1.18
VPS11-204ENST00000530809 TTC21BQ7Z4L5 1316 aa7.65□□□□□ -1.18
VPS11-204ENST00000530809 PELP1Q8IZL8 1130 aaKnown RBP7.65□□□□□ -1.18
VPS11-204ENST00000530809 KLHL34Q8N239 644 aa7.65□□□□□ -1.18
VPS11-204ENST00000530809 AKT1S1Q96B36 256 aa7.65□□□□□ -1.18
VPS11-204ENST00000530809 ACSBG1Q96GR2 724 aa7.65□□□□□ -1.18
VPS11-204ENST00000530809 HMGB2P26583 209 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms