RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 AMPHP49418 695 aa14.31□□□□□ -0.12
SOX6-213ENST00000530378 CHRNA2Q15822 529 aa14.29□□□□□ -0.12
SOX6-213ENST00000530378 HSP90AB2PQ58FF8 381 aa14.29□□□□□ -0.12
SOX6-213ENST00000530378 KCNH5Q8NCM2 988 aa14.29□□□□□ -0.12
SOX6-213ENST00000530378 LTV1Q96GA3 475 aaPredicted RBP14.29□□□□□ -0.12
SOX6-213ENST00000530378 CFAP53Q96M91 514 aa14.29□□□□□ -0.12
SOX6-213ENST00000530378 KIAA0232Q92628 1395 aa14.29□□□□□ -0.12
SOX6-213ENST00000530378 NUTM2BA6NNL0 878 aaPredicted RBP14.29□□□□□ -0.12
SOX6-213ENST00000530378 NUTM2EB1AL46 878 aaPredicted RBP14.29□□□□□ -0.12
SOX6-213ENST00000530378 NUTM2AQ8IVF1 878 aaPredicted RBP14.29□□□□□ -0.12
SOX6-213ENST00000530378 FLT4P35916 1363 aa14.28□□□□□ -0.12
SOX6-213ENST00000530378 RGPD2P0DJD1 1756 aa14.28□□□□□ -0.12
SOX6-213ENST00000530378 HOXC9P31274 260 aa14.27□□□□□ -0.12
SOX6-213ENST00000530378 U2SURPO15042 1029 aaKnown RBP14.27□□□□□ -0.13
SOX6-213ENST00000530378 ARHGEF25Q86VW2 580 aa14.27□□□□□ -0.13
SOX6-213ENST00000530378 PNISRQ8TF01 805 aaKnown RBP14.27□□□□□ -0.13
SOX6-213ENST00000530378 COL18A1P39060 1754 aa14.26□□□□□ -0.13
SOX6-213ENST00000530378 ADAMTS2O95450 1211 aa14.26□□□□□ -0.13
SOX6-213ENST00000530378 WDR43Q15061 677 aaKnown RBP eCLIP14.26□□□□□ -0.13
SOX6-213ENST00000530378 PRDM11Q9NQV5 511 aa14.26□□□□□ -0.13
SOX6-213ENST00000530378 DIAPH1O60610 1272 aaKnown RBP14.25□□□□□ -0.13
SOX6-213ENST00000530378 RTL1A6NKG5 1358 aa14.25□□□□□ -0.13
SOX6-213ENST00000530378 JCADQ9P266 1359 aa14.25□□□□□ -0.13
SOX6-213ENST00000530378 EIF4A2Q14240 407 aaKnown RBP14.25□□□□□ -0.13
SOX6-213ENST00000530378 AXIN2Q9Y2T1 843 aa14.25□□□□□ -0.13
SOX6-213ENST00000530378 U2AF1L5P0DN76 240 aaPredicted RBP14.23□□□□□ -0.13
SOX6-213ENST00000530378 U2AF1Q01081 240 aaKnown RBP eCLIP14.23□□□□□ -0.13
SOX6-213ENST00000530378 CCDC146Q8IYE0 955 aa14.23□□□□□ -0.13
SOX6-213ENST00000530378 IP6K1Q92551 441 aa14.23□□□□□ -0.13
SOX6-213ENST00000530378 ADAMTS8Q9UP79 889 aa14.23□□□□□ -0.13
SOX6-213ENST00000530378 PLCH1Q4KWH8 1693 aa14.23□□□□□ -0.13
SOX6-213ENST00000530378 LMO7Q8WWI1 1683 aa14.23□□□□□ -0.13
SOX6-213ENST00000530378 CPDO75976 1380 aa14.22□□□□□ -0.13
SOX6-213ENST00000530378 INSRP06213 1382 aa14.22□□□□□ -0.13
SOX6-213ENST00000530378 LRP6O75581 1613 aa14.22□□□□□ -0.13
SOX6-213ENST00000530378 HMOX1P09601 288 aa14.22□□□□□ -0.13
SOX6-213ENST00000530378 IL13P35225 146 aa14.22□□□□□ -0.13
SOX6-213ENST00000530378 USHBP1Q8N6Y0 703 aa14.22□□□□□ -0.13
SOX6-213ENST00000530378 RGPD1P0DJD0 1748 aa14.22□□□□□ -0.13
SOX6-213ENST00000530378 CAMTA1Q9Y6Y1 1673 aa14.21□□□□□ -0.13
SOX6-213ENST00000530378 COL14A1Q05707 1796 aaKnown RBP14.21□□□□□ -0.14
SOX6-213ENST00000530378 FAM83GA6ND36 823 aa14.2□□□□□ -0.14
SOX6-213ENST00000530378 AEBP1Q8IUX7 1158 aa14.2□□□□□ -0.14
SOX6-213ENST00000530378 ANKRD24Q8TF21 1146 aa14.2□□□□□ -0.14
SOX6-213ENST00000530378 NUDCQ9Y266 331 aa14.2□□□□□ -0.14
SOX6-213ENST00000530378 KIF24Q5T7B8 1368 aa14.2□□□□□ -0.14
SOX6-213ENST00000530378 BLMP54132 1417 aaPredicted RBP14.2□□□□□ -0.14
SOX6-213ENST00000530378 CSB-PGBD3P0DP91 1061 aa14.19□□□□□ -0.14
SOX6-213ENST00000530378 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
SOX6-213ENST00000530378 STRN4Q9NRL3 753 aa14.19□□□□□ -0.14
SOX6-213ENST00000530378 ERBB3P21860 1342 aa14.18□□□□□ -0.14
SOX6-213ENST00000530378 ABCC6O95255 1503 aa14.18□□□□□ -0.14
SOX6-213ENST00000530378 EYA1Q99502 592 aa14.18□□□□□ -0.14
SOX6-213ENST00000530378 BTG4Q9NY30 223 aa14.18□□□□□ -0.14
SOX6-213ENST00000530378 SALL2Q9Y467 1007 aaPredicted RBP14.18□□□□□ -0.14
SOX6-213ENST00000530378 COL5A2P05997 1499 aaPredicted RBP14.17□□□□□ -0.14
SOX6-213ENST00000530378 HNRNPUQ00839 825 aaKnown RBP eCLIP14.17□□□□□ -0.14
SOX6-213ENST00000530378 SULT6B1Q6IMI4 303 aa14.17□□□□□ -0.14
SOX6-213ENST00000530378 C8orf37Q96NL8 207 aa14.17□□□□□ -0.14
SOX6-213ENST00000530378 FAM208AQ9UK61 1670 aaKnown RBP14.16□□□□□ -0.14
SOX6-213ENST00000530378 NBPF6Q5VWK0 638 aa14.16□□□□□ -0.14
SOX6-213ENST00000530378 NBPF4Q96M43 638 aa14.16□□□□□ -0.14
SOX6-213ENST00000530378 NLRP2Q9NX02 1062 aa14.16□□□□□ -0.14
SOX6-213ENST00000530378 NRAPQ86VF7 1730 aa14.16□□□□□ -0.14
SOX6-213ENST00000530378 PRKAR2BP31323 418 aa14.15□□□□□ -0.14
SOX6-213ENST00000530378 MEX3CQ5U5Q3 659 aaKnown RBP14.15□□□□□ -0.14
SOX6-213ENST00000530378 SPATA31A6Q5VVP1 1343 aa14.14□□□□□ -0.15
SOX6-213ENST00000530378 IGSF1Q8N6C5 1336 aa14.14□□□□□ -0.15
SOX6-213ENST00000530378 RSPH6AQ9H0K4 717 aa14.14□□□□□ -0.15
SOX6-213ENST00000530378 RRP7AQ9Y3A4 280 aaKnown RBP14.14□□□□□ -0.15
SOX6-213ENST00000530378 EVA1CP58658 441 aa14.13□□□□□ -0.15
SOX6-213ENST00000530378 LARP1Q6PKG0 1096 aaKnown RBP14.13□□□□□ -0.15
SOX6-213ENST00000530378 USP35Q9P2H5 1018 aa14.13□□□□□ -0.15
SOX6-213ENST00000530378 RGS17Q9UGC6 210 aaPredicted RBP14.13□□□□□ -0.15
SOX6-213ENST00000530378 NWD2Q9ULI1 1742 aa14.13□□□□□ -0.15
SOX6-213ENST00000530378 NEUROD2Q15784 382 aa14.13□□□□□ -0.15
SOX6-213ENST00000530378 TOM1L2Q6ZVM7 507 aa14.13□□□□□ -0.15
SOX6-213ENST00000530378 NGLY1Q96IV0 654 aa14.12□□□□□ -0.15
SOX6-213ENST00000530378 DLG5Q8TDM6 1919 aa14.12□□□□□ -0.15
SOX6-213ENST00000530378 WDR17Q8IZU2 1322 aa14.12□□□□□ -0.15
SOX6-213ENST00000530378 MAPK8IP3Q9UPT6 1336 aa14.12□□□□□ -0.15
SOX6-213ENST00000530378 APAF1O14727 1248 aa14.11□□□□□ -0.15
SOX6-213ENST00000530378 PHACTR3Q96KR7 559 aa14.11□□□□□ -0.15
SOX6-213ENST00000530378 CNKSR2Q8WXI2 1034 aa14.11□□□□□ -0.15
SOX6-213ENST00000530378 RUNDC1Q96C34 613 aa14.11□□□□□ -0.15
SOX6-213ENST00000530378 SLIT2O94813 1529 aa14.1□□□□□ -0.15
SOX6-213ENST00000530378 FCHSD2O94868 740 aa14.1□□□□□ -0.15
SOX6-213ENST00000530378 PLEKHF1Q96S99 279 aa14.1□□□□□ -0.15
SOX6-213ENST00000530378 KDRP35968 1356 aa14.1□□□□□ -0.15
SOX6-213ENST00000530378 MEGF6O75095 1541 aa14.09□□□□□ -0.15
SOX6-213ENST00000530378 TCP11L2Q8N4U5 519 aa14.09□□□□□ -0.15
SOX6-213ENST00000530378 CCDC9Q9Y3X0 531 aaKnown RBP14.09□□□□□ -0.15
SOX6-213ENST00000530378 CRB1P82279 1406 aa14.08□□□□□ -0.15
SOX6-213ENST00000530378 WNK3Q9BYP7 1800 aa14.08□□□□□ -0.16
SOX6-213ENST00000530378 NCAPD2Q15021 1401 aa14.07□□□□□ -0.16
SOX6-213ENST00000530378 AFF2P51816 1311 aa14.07□□□□□ -0.16
SOX6-213ENST00000530378 PARP4Q9UKK3 1724 aaKnown RBP14.07□□□□□ -0.16
SOX6-213ENST00000530378 BCL9LQ86UU0 1499 aa14.06□□□□□ -0.16
SOX6-213ENST00000530378 NEFMP07197 916 aa14.06□□□□□ -0.16
SOX6-213ENST00000530378 USP21Q9UK80 565 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms