RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 LAMC3Q9Y6N6 1575 aa18.4■□□□□ 0.54
PCDHA4-203ENST00000530339 C20orf194Q5TEA3 1177 aa18.4■□□□□ 0.54
PCDHA4-203ENST00000530339 ABCC11Q96J66 1382 aa18.39■□□□□ 0.53
PCDHA4-203ENST00000530339 CCDC112Q8NEF3 446 aa18.39■□□□□ 0.53
PCDHA4-203ENST00000530339 TBC1D2BQ9UPU7 963 aa18.39■□□□□ 0.53
PCDHA4-203ENST00000530339 ZNF396Q96N95 335 aaPredicted RBP18.39■□□□□ 0.53
PCDHA4-203ENST00000530339 RTEL1-TNFRSF6BF6WH68 1400 aa18.38■□□□□ 0.53
PCDHA4-203ENST00000530339 SMC2O95347 1197 aa18.38■□□□□ 0.53
PCDHA4-203ENST00000530339 PDILTQ8N807 584 aa18.38■□□□□ 0.53
PCDHA4-203ENST00000530339 CDK19Q9BWU1 502 aa18.38■□□□□ 0.53
PCDHA4-203ENST00000530339 KLHL34Q8N239 644 aa18.38■□□□□ 0.53
PCDHA4-203ENST00000530339 NEUROD6Q96NK8 337 aa18.38■□□□□ 0.53
PCDHA4-203ENST00000530339 KRT85P78386 507 aa18.37■□□□□ 0.53
PCDHA4-203ENST00000530339 ERCC4Q92889 916 aaPredicted RBP18.37■□□□□ 0.53
PCDHA4-203ENST00000530339 LRRCC1Q9C099 1032 aa18.37■□□□□ 0.53
PCDHA4-203ENST00000530339 NLRP2Q9NX02 1062 aa18.37■□□□□ 0.53
PCDHA4-203ENST00000530339 CYP46A1Q9Y6A2 500 aa18.37■□□□□ 0.53
PCDHA4-203ENST00000530339 NCOA1Q15788 1441 aa18.37■□□□□ 0.53
PCDHA4-203ENST00000530339 NESP48681 1621 aa18.37■□□□□ 0.53
PCDHA4-203ENST00000530339 WASHC4Q2M389 1173 aa18.37■□□□□ 0.53
PCDHA4-203ENST00000530339 SKAP1Q86WV1 359 aa18.37■□□□□ 0.53
PCDHA4-203ENST00000530339 MAGI1Q96QZ7 1491 aaPredicted RBP18.37■□□□□ 0.53
PCDHA4-203ENST00000530339 RPAP2Q8IXW5 612 aaPredicted RBP18.36■□□□□ 0.53
PCDHA4-203ENST00000530339 TNMDQ9H2S6 317 aa18.36■□□□□ 0.53
PCDHA4-203ENST00000530339 CAMSAP2Q08AD1 1489 aa18.36■□□□□ 0.53
PCDHA4-203ENST00000530339 SLC4A2P04920 1241 aa18.36■□□□□ 0.53
PCDHA4-203ENST00000530339 ABTB2Q8N961 1025 aa18.36■□□□□ 0.53
PCDHA4-203ENST00000530339 KIF14Q15058 1648 aa18.36■□□□□ 0.53
PCDHA4-203ENST00000530339 THEMISQ8N1K5 641 aaPredicted RBP18.36■□□□□ 0.53
PCDHA4-203ENST00000530339 MPNDQ8N594 471 aa18.36■□□□□ 0.53
PCDHA4-203ENST00000530339 PIP4K2AP48426 406 aaPredicted RBP18.35■□□□□ 0.53
PCDHA4-203ENST00000530339 CDR1P51861 262 aa18.35■□□□□ 0.53
PCDHA4-203ENST00000530339 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
PCDHA4-203ENST00000530339 TXNDC2Q86VQ3 553 aa18.35■□□□□ 0.53
PCDHA4-203ENST00000530339 FMNL2Q96PY5 1086 aa18.34■□□□□ 0.53
PCDHA4-203ENST00000530339 NKTRP30414 1462 aaKnown RBP18.34■□□□□ 0.53
PCDHA4-203ENST00000530339 TMEM57Q8N5G2 664 aa18.33■□□□□ 0.53
PCDHA4-203ENST00000530339 JMYQ8N9B5 988 aa18.33■□□□□ 0.53
PCDHA4-203ENST00000530339 PROSER2Q86WR7 435 aaPredicted RBP18.33■□□□□ 0.53
PCDHA4-203ENST00000530339 RARSP54136 660 aaKnown RBP18.33■□□□□ 0.52
PCDHA4-203ENST00000530339 CDK13Q14004 1512 aaKnown RBP18.33■□□□□ 0.52
PCDHA4-203ENST00000530339 AIMP1Q12904 312 aaKnown RBP18.33■□□□□ 0.52
PCDHA4-203ENST00000530339 HDGFL1Q5TGJ6 251 aa18.33■□□□□ 0.52
PCDHA4-203ENST00000530339 ZSCAN31Q96LW9 406 aaPredicted RBP18.32■□□□□ 0.52
PCDHA4-203ENST00000530339 STK38Q15208 465 aa18.32■□□□□ 0.52
PCDHA4-203ENST00000530339 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
PCDHA4-203ENST00000530339 KRI1Q8N9T8 703 aaKnown RBP18.32■□□□□ 0.52
PCDHA4-203ENST00000530339 LRPPRCP42704 1394 aaKnown RBP18.32■□□□□ 0.52
PCDHA4-203ENST00000530339 SYCE3A1L190 88 aa18.32■□□□□ 0.52
PCDHA4-203ENST00000530339 TATP17735 454 aaPredicted RBP18.32■□□□□ 0.52
PCDHA4-203ENST00000530339 CABP1Q9NZU7 370 aa18.32■□□□□ 0.52
PCDHA4-203ENST00000530339 ALDH1L2Q3SY69 923 aa18.31■□□□□ 0.52
PCDHA4-203ENST00000530339 LARP1BQ659C4 914 aaKnown RBP18.31■□□□□ 0.52
PCDHA4-203ENST00000530339 SLC3A2P08195 630 aaKnown RBP18.31■□□□□ 0.52
PCDHA4-203ENST00000530339 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.31■□□□□ 0.52
PCDHA4-203ENST00000530339 RAD21O60216 631 aa18.31■□□□□ 0.52
PCDHA4-203ENST00000530339 NFE2L2Q16236 605 aa18.31■□□□□ 0.52
PCDHA4-203ENST00000530339 ABCC5O15440 1437 aa18.31■□□□□ 0.52
PCDHA4-203ENST00000530339 SULT6B1Q6IMI4 303 aa18.3■□□□□ 0.52
PCDHA4-203ENST00000530339 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
PCDHA4-203ENST00000530339 CCDC158Q5M9N0 1113 aa18.3■□□□□ 0.52
PCDHA4-203ENST00000530339 POGZQ7Z3K3 1410 aa18.3■□□□□ 0.52
PCDHA4-203ENST00000530339 NSD2O96028 1365 aa18.3■□□□□ 0.52
PCDHA4-203ENST00000530339 PEG3Q9GZU2 1588 aa18.29■□□□□ 0.52
PCDHA4-203ENST00000530339 TMPOP42166 694 aaKnown RBP18.29■□□□□ 0.52
PCDHA4-203ENST00000530339 CEBPZQ03701 1054 aaKnown RBP18.29■□□□□ 0.52
PCDHA4-203ENST00000530339 LEKR1Q6ZMV7 388 aa18.29■□□□□ 0.52
PCDHA4-203ENST00000530339 NUP62CLQ9H1M0 184 aa18.29■□□□□ 0.52
PCDHA4-203ENST00000530339 FILIP1LQ4L180 1135 aa18.29■□□□□ 0.52
PCDHA4-203ENST00000530339 NAP1L1P55209 391 aaKnown RBP18.29■□□□□ 0.52
PCDHA4-203ENST00000530339 ZSCAN25Q6NSZ9 544 aa18.28■□□□□ 0.52
PCDHA4-203ENST00000530339 DUSP27Q5VZP5 1158 aa18.28■□□□□ 0.52
PCDHA4-203ENST00000530339 SMARCE1Q969G3 411 aa18.28■□□□□ 0.52
PCDHA4-203ENST00000530339 THOC2Q8NI27 1593 aaKnown RBP18.28■□□□□ 0.52
PCDHA4-203ENST00000530339 KRT32Q14532 448 aa18.28■□□□□ 0.52
PCDHA4-203ENST00000530339 PDCL2Q8N4E4 241 aa18.28■□□□□ 0.52
PCDHA4-203ENST00000530339 CAGE1Q8TC20 777 aa18.28■□□□□ 0.52
PCDHA4-203ENST00000530339 TNPO1Q92973 898 aaKnown RBP18.28■□□□□ 0.52
PCDHA4-203ENST00000530339 SPG7Q9UQ90 795 aa18.28■□□□□ 0.52
PCDHA4-203ENST00000530339 RPRD2Q5VT52 1461 aaKnown RBP18.27■□□□□ 0.52
PCDHA4-203ENST00000530339 CCDC43Q96MW1 224 aaKnown RBP18.27■□□□□ 0.51
PCDHA4-203ENST00000530339 TXLNAP40222 546 aa18.27■□□□□ 0.51
PCDHA4-203ENST00000530339 DNAJC2Q99543 621 aaKnown RBP18.27■□□□□ 0.51
PCDHA4-203ENST00000530339 PDCL3Q9H2J4 239 aa18.27■□□□□ 0.51
PCDHA4-203ENST00000530339 DACH1Q9UI36 760 aa18.27■□□□□ 0.51
PCDHA4-203ENST00000530339 SPATA32Q96LK8 384 aa18.26■□□□□ 0.51
PCDHA4-203ENST00000530339 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
PCDHA4-203ENST00000530339 SERPINC1P01008 464 aa18.26■□□□□ 0.51
PCDHA4-203ENST00000530339 ME1P48163 572 aa18.26■□□□□ 0.51
PCDHA4-203ENST00000530339 GNL3LQ9NVN8 582 aaKnown RBP18.26■□□□□ 0.51
PCDHA4-203ENST00000530339 PPP6R1Q9UPN7 881 aa18.26■□□□□ 0.51
PCDHA4-203ENST00000530339 PATL2C9JE40 543 aaKnown RBP18.26■□□□□ 0.51
PCDHA4-203ENST00000530339 H0YHG0 523 aa18.26■□□□□ 0.51
PCDHA4-203ENST00000530339 BLOC1S2Q6QNY1 142 aa18.25■□□□□ 0.51
PCDHA4-203ENST00000530339 DHX29Q7Z478 1369 aaKnown RBP18.25■□□□□ 0.51
PCDHA4-203ENST00000530339 TTLL5Q6EMB2 1281 aa18.25■□□□□ 0.51
PCDHA4-203ENST00000530339 PDRG1Q9NUG6 133 aa18.25■□□□□ 0.51
PCDHA4-203ENST00000530339 CFAP45Q9UL16 551 aa18.25■□□□□ 0.51
PCDHA4-203ENST00000530339 CEP57L1Q8IYX8 460 aa18.25■□□□□ 0.51
PCDHA4-203ENST00000530339 SSH1Q8WYL5 1049 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms