RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 LARP1Q6PKG0 1096 aaKnown RBP23.4■■□□□ 1.34
SF3B2-209ENST00000530322 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.34
SF3B2-209ENST00000530322 POLR3GLQ9BT43 218 aa23.4■■□□□ 1.34
SF3B2-209ENST00000530322 KIF20BQ96Q89 1820 aa23.4■■□□□ 1.34
SF3B2-209ENST00000530322 EP400Q96L91 3159 aa23.4■■□□□ 1.34
SF3B2-209ENST00000530322 THSD7AQ9UPZ6 1657 aa23.39■■□□□ 1.34
SF3B2-209ENST00000530322 C11orf95C9JLR9 678 aaPredicted RBP23.39■■□□□ 1.33
SF3B2-209ENST00000530322 FYB1O15117 783 aa23.39■■□□□ 1.33
SF3B2-209ENST00000530322 COG3Q96JB2 828 aa23.39■■□□□ 1.33
SF3B2-209ENST00000530322 NSD3Q9BZ95 1437 aa23.37■■□□□ 1.33
SF3B2-209ENST00000530322 CRB1P82279 1406 aa23.35■■□□□ 1.33
SF3B2-209ENST00000530322 GGNBP2Q9H3C7 697 aa23.35■■□□□ 1.33
SF3B2-209ENST00000530322 USP35Q9P2H5 1018 aa23.35■■□□□ 1.33
SF3B2-209ENST00000530322 A0A0G2JS52 829 aa23.34■■□□□ 1.33
SF3B2-209ENST00000530322 MYT1Q01538 1121 aa23.34■■□□□ 1.33
SF3B2-209ENST00000530322 BARGINQ6ZT62 677 aa23.34■■□□□ 1.33
SF3B2-209ENST00000530322 WDR17Q8IZU2 1322 aa23.33■■□□□ 1.33
SF3B2-209ENST00000530322 TCP11L2Q8N4U5 519 aa23.33■■□□□ 1.33
SF3B2-209ENST00000530322 KRT27Q7Z3Y8 459 aa23.32■■□□□ 1.32
SF3B2-209ENST00000530322 THRAP3Q9Y2W1 955 aaKnown RBP23.32■■□□□ 1.32
SF3B2-209ENST00000530322 KIF7Q2M1P5 1343 aa23.31■■□□□ 1.32
SF3B2-209ENST00000530322 FBLN1P23142 703 aa23.3■■□□□ 1.32
SF3B2-209ENST00000530322 TOM1L2Q6ZVM7 507 aa23.3■■□□□ 1.32
SF3B2-209ENST00000530322 PANK3Q9H999 370 aa23.29■■□□□ 1.32
SF3B2-209ENST00000530322 WNK3Q9BYP7 1800 aa23.28■■□□□ 1.32
SF3B2-209ENST00000530322 CGNL1Q0VF96 1302 aa23.28■■□□□ 1.32
SF3B2-209ENST00000530322 MAP3K19Q56UN5 1328 aa23.28■■□□□ 1.32
SF3B2-209ENST00000530322 BLMP54132 1417 aaPredicted RBP23.27■■□□□ 1.32
SF3B2-209ENST00000530322 IP6K1Q92551 441 aa23.27■■□□□ 1.32
SF3B2-209ENST00000530322 PARP4Q9UKK3 1724 aaKnown RBP23.27■■□□□ 1.32
SF3B2-209ENST00000530322 ERBB3P21860 1342 aa23.27■■□□□ 1.32
SF3B2-209ENST00000530322 CSB-PGBD3P0DP91 1061 aa23.26■■□□□ 1.31
SF3B2-209ENST00000530322 ANKRD26Q9UPS8 1709 aa23.25■■□□□ 1.31
SF3B2-209ENST00000530322 CARD10Q9BWT7 1032 aa23.25■■□□□ 1.31
SF3B2-209ENST00000530322 ANKRD24Q8TF21 1146 aa23.24■■□□□ 1.31
SF3B2-209ENST00000530322 HOXC9P31274 260 aa23.23■■□□□ 1.31
SF3B2-209ENST00000530322 RRS1Q15050 365 aaKnown RBP23.23■■□□□ 1.31
SF3B2-209ENST00000530322 RTL1A6NKG5 1358 aa23.23■■□□□ 1.31
SF3B2-209ENST00000530322 AMPHP49418 695 aa23.22■■□□□ 1.31
SF3B2-209ENST00000530322 FAM182BQ5T319 152 aa23.21■■□□□ 1.31
SF3B2-209ENST00000530322 CCDC125Q86Z20 511 aa23.21■■□□□ 1.31
SF3B2-209ENST00000530322 CCDC7Q96M83 1385 aa23.21■■□□□ 1.31
SF3B2-209ENST00000530322 LRRC37A3O60309 1634 aa23.21■■□□□ 1.31
SF3B2-209ENST00000530322 FAM208AQ9UK61 1670 aaKnown RBP23.21■■□□□ 1.31
SF3B2-209ENST00000530322 PEAK1Q9H792 1746 aa23.21■■□□□ 1.31
SF3B2-209ENST00000530322 DISP2A7MBM2 1401 aa23.19■■□□□ 1.3
SF3B2-209ENST00000530322 NLRP2Q9NX02 1062 aa23.19■■□□□ 1.3
SF3B2-209ENST00000530322 MAP2P11137 1827 aaKnown RBP23.19■■□□□ 1.3
SF3B2-209ENST00000530322 WASHC2AQ641Q2 1341 aa23.18■■□□□ 1.3
SF3B2-209ENST00000530322 CDCA7Q9BWT1 371 aaPredicted RBP23.18■■□□□ 1.3
SF3B2-209ENST00000530322 KIF24Q5T7B8 1368 aa23.17■■□□□ 1.3
SF3B2-209ENST00000530322 PDE3BQ13370 1112 aa23.17■■□□□ 1.3
SF3B2-209ENST00000530322 RGPD2P0DJD1 1756 aa23.17■■□□□ 1.3
SF3B2-209ENST00000530322 NSD2O96028 1365 aa23.16■■□□□ 1.3
SF3B2-209ENST00000530322 LTV1Q96GA3 475 aaPredicted RBP23.16■■□□□ 1.3
SF3B2-209ENST00000530322 KNSTRNQ9Y448 316 aa23.15■■□□□ 1.3
SF3B2-209ENST00000530322 EMILIN1Q9Y6C2 1016 aa23.15■■□□□ 1.3
SF3B2-209ENST00000530322 FLT4P35916 1363 aa23.14■■□□□ 1.3
SF3B2-209ENST00000530322 DDB1Q16531 1140 aa23.14■■□□□ 1.29
SF3B2-209ENST00000530322 INSRP06213 1382 aa23.14■■□□□ 1.29
SF3B2-209ENST00000530322 HSP90AB2PQ58FF8 381 aa23.13■■□□□ 1.29
SF3B2-209ENST00000530322 FAM196AQ6ZSG2 479 aa23.13■■□□□ 1.29
SF3B2-209ENST00000530322 RGPD1P0DJD0 1748 aa23.13■■□□□ 1.29
SF3B2-209ENST00000530322 PER1O15534 1290 aaPredicted RBP23.11■■□□□ 1.29
SF3B2-209ENST00000530322 AMER1Q5JTC6 1135 aaPredicted RBP23.11■■□□□ 1.29
SF3B2-209ENST00000530322 POLKQ9UBT6 870 aa23.11■■□□□ 1.29
SF3B2-209ENST00000530322 TNS1Q9HBL0 1735 aaKnown RBP23.11■■□□□ 1.29
SF3B2-209ENST00000530322 IL2RBP14784 551 aa23.1■■□□□ 1.29
SF3B2-209ENST00000530322 TNNT2P45379 298 aaPredicted RBP23.1■■□□□ 1.29
SF3B2-209ENST00000530322 TNS2Q63HR2 1409 aa23.09■■□□□ 1.29
SF3B2-209ENST00000530322 SMG6Q86US8 1419 aaKnown RBP23.09■■□□□ 1.29
SF3B2-209ENST00000530322 SF3B2Q13435 895 aaKnown RBP23.09■■□□□ 1.29
SF3B2-209ENST00000530322 OVOS2A0A0G2JMS6 1433 aa23.08■■□□□ 1.29
SF3B2-209ENST00000530322 EXOC5O00471 708 aa23.08■■□□□ 1.29
SF3B2-209ENST00000530322 PPM1GO15355 546 aaPredicted RBP23.08■■□□□ 1.29
SF3B2-209ENST00000530322 NBPF6Q5VWK0 638 aa23.08■■□□□ 1.29
SF3B2-209ENST00000530322 NBPF4Q96M43 638 aa23.08■■□□□ 1.29
SF3B2-209ENST00000530322 SBF2Q86WG5 1849 aa23.08■■□□□ 1.28
SF3B2-209ENST00000530322 DEFB132Q7Z7B7 95 aa23.07■■□□□ 1.28
SF3B2-209ENST00000530322 MORC1Q86VD1 984 aa23.07■■□□□ 1.28
SF3B2-209ENST00000530322 MARCH10Q8NA82 808 aaPredicted RBP23.07■■□□□ 1.28
SF3B2-209ENST00000530322 TRIM37O94972 964 aa23.06■■□□□ 1.28
SF3B2-209ENST00000530322 BCL9O00512 1426 aa23.04■■□□□ 1.28
SF3B2-209ENST00000530322 BAG6P46379 1132 aa23.02■■□□□ 1.28
SF3B2-209ENST00000530322 USHBP1Q8N6Y0 703 aa23.02■■□□□ 1.28
SF3B2-209ENST00000530322 MEGF6O75095 1541 aa23.02■■□□□ 1.28
SF3B2-209ENST00000530322 NPC1L1Q9UHC9 1359 aa23.01■■□□□ 1.27
SF3B2-209ENST00000530322 NCAPD2Q15021 1401 aa22.99■■□□□ 1.27
SF3B2-209ENST00000530322 SHANK3Q9BYB0 1731 aa22.99■■□□□ 1.27
SF3B2-209ENST00000530322 EN1Q05925 392 aaPredicted RBP22.98■■□□□ 1.27
SF3B2-209ENST00000530322 CC2D1BQ5T0F9 858 aaKnown RBP22.98■■□□□ 1.27
SF3B2-209ENST00000530322 APBA3O96018 575 aa22.97■■□□□ 1.27
SF3B2-209ENST00000530322 EIF4A2Q14240 407 aaKnown RBP22.97■■□□□ 1.27
SF3B2-209ENST00000530322 RAPGEF4Q8WZA2 1011 aa22.96■■□□□ 1.27
SF3B2-209ENST00000530322 EYA1Q99502 592 aa22.96■■□□□ 1.27
SF3B2-209ENST00000530322 ZCRB1Q8TBF4 217 aaKnown RBP22.95■■□□□ 1.26
SF3B2-209ENST00000530322 PTF1AQ7RTS3 328 aa22.94■■□□□ 1.26
SF3B2-209ENST00000530322 CAMKK2Q96RR4 588 aa22.94■■□□□ 1.26
SF3B2-209ENST00000530322 BCL11BQ9C0K0 894 aaPredicted RBP22.94■■□□□ 1.26
SF3B2-209ENST00000530322 NHSQ6T4R5 1651 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms