RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 CDCA7Q9BWT1 371 aaPredicted RBP23.19■■□□□ 1.3
COL16A1-216ENST00000529928 PIK3C2AO00443 1686 aa23.19■■□□□ 1.3
COL16A1-216ENST00000529928 COL18A1P39060 1754 aa23.18■■□□□ 1.3
COL16A1-216ENST00000529928 CPSF1Q10570 1443 aaKnown RBP23.17■■□□□ 1.3
COL16A1-216ENST00000529928 EVC2Q86UK5 1308 aa23.17■■□□□ 1.3
COL16A1-216ENST00000529928 WNK3Q9BYP7 1800 aa23.17■■□□□ 1.3
COL16A1-216ENST00000529928 BCL9O00512 1426 aa23.16■■□□□ 1.3
COL16A1-216ENST00000529928 AXIN2Q9Y2T1 843 aa23.16■■□□□ 1.3
COL16A1-216ENST00000529928 KCNH5Q8NCM2 988 aa23.15■■□□□ 1.3
COL16A1-216ENST00000529928 ANO8Q9HCE9 1232 aaPredicted RBP23.15■■□□□ 1.3
COL16A1-216ENST00000529928 ARHGEF25Q86VW2 580 aa23.14■■□□□ 1.29
COL16A1-216ENST00000529928 MARCH10Q8NA82 808 aaPredicted RBP23.14■■□□□ 1.29
COL16A1-216ENST00000529928 ZNF692Q9BU19 519 aaPredicted RBP23.14■■□□□ 1.29
COL16A1-216ENST00000529928 CASZ1Q86V15 1759 aa23.14■■□□□ 1.29
COL16A1-216ENST00000529928 AKAP12Q02952 1782 aa23.13■■□□□ 1.29
COL16A1-216ENST00000529928 TRPM1Q7Z4N2 1603 aa23.12■■□□□ 1.29
COL16A1-216ENST00000529928 PTF1AQ7RTS3 328 aa23.12■■□□□ 1.29
COL16A1-216ENST00000529928 TTC21BQ7Z4L5 1316 aa23.11■■□□□ 1.29
COL16A1-216ENST00000529928 CARD10Q9BWT7 1032 aa23.11■■□□□ 1.29
COL16A1-216ENST00000529928 TTC21AQ8NDW8 1320 aa23.1■■□□□ 1.29
COL16A1-216ENST00000529928 CSB-PGBD3P0DP91 1061 aa23.1■■□□□ 1.29
COL16A1-216ENST00000529928 PROM2Q8N271 834 aa23.1■■□□□ 1.29
COL16A1-216ENST00000529928 L3MBTL2Q969R5 705 aa23.08■■□□□ 1.29
COL16A1-216ENST00000529928 RGPD5Q99666 1765 aa23.07■■□□□ 1.28
COL16A1-216ENST00000529928 CCDC7Q96M83 1385 aa23.07■■□□□ 1.28
COL16A1-216ENST00000529928 EXOC5O00471 708 aa23.07■■□□□ 1.28
COL16A1-216ENST00000529928 SOX12O15370 315 aa23.07■■□□□ 1.28
COL16A1-216ENST00000529928 TXNRD1Q16881 649 aa23.07■■□□□ 1.28
COL16A1-216ENST00000529928 PDGFDQ9GZP0 370 aaPredicted RBP23.07■■□□□ 1.28
COL16A1-216ENST00000529928 ABCC6O95255 1503 aa23.07■■□□□ 1.28
COL16A1-216ENST00000529928 ZBTB7AO95365 584 aa23.06■■□□□ 1.28
COL16A1-216ENST00000529928 STK32BQ9NY57 414 aa23.06■■□□□ 1.28
COL16A1-216ENST00000529928 NFAT5O94916 1531 aa23.05■■□□□ 1.28
COL16A1-216ENST00000529928 ROCK2O75116 1388 aaKnown RBP23.04■■□□□ 1.28
COL16A1-216ENST00000529928 PTGER2P43116 358 aa23.04■■□□□ 1.28
COL16A1-216ENST00000529928 TNS2Q63HR2 1409 aa23.04■■□□□ 1.28
COL16A1-216ENST00000529928 MYOM1P52179 1685 aa23.03■■□□□ 1.28
COL16A1-216ENST00000529928 KTN1Q86UP2 1357 aaKnown RBP23.03■■□□□ 1.28
COL16A1-216ENST00000529928 SLC15A2Q16348 729 aa23.03■■□□□ 1.28
COL16A1-216ENST00000529928 ATF5Q9Y2D1 282 aaPredicted RBP23.01■■□□□ 1.27
COL16A1-216ENST00000529928 MTFR1LQ9H019 292 aa22.99■■□□□ 1.27
COL16A1-216ENST00000529928 NHSQ6T4R5 1651 aa22.99■■□□□ 1.27
COL16A1-216ENST00000529928 MON2Q7Z3U7 1717 aa22.98■■□□□ 1.27
COL16A1-216ENST00000529928 ERBB3P21860 1342 aa22.97■■□□□ 1.27
COL16A1-216ENST00000529928 USP31Q70CQ4 1352 aa22.97■■□□□ 1.27
COL16A1-216ENST00000529928 SYT17Q9BSW7 474 aa22.96■■□□□ 1.27
COL16A1-216ENST00000529928 FHDC1Q9C0D6 1143 aaPredicted RBP22.96■■□□□ 1.27
COL16A1-216ENST00000529928 USP54Q70EL1 1684 aa22.95■■□□□ 1.26
COL16A1-216ENST00000529928 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.95■■□□□ 1.26
COL16A1-216ENST00000529928 NLRP2Q9NX02 1062 aa22.95■■□□□ 1.26
COL16A1-216ENST00000529928 SBNO2Q9Y2G9 1366 aa22.94■■□□□ 1.26
COL16A1-216ENST00000529928 IL2RBP14784 551 aa22.94■■□□□ 1.26
COL16A1-216ENST00000529928 ACSBG1Q96GR2 724 aa22.94■■□□□ 1.26
COL16A1-216ENST00000529928 SIN3AQ96ST3 1273 aa22.94■■□□□ 1.26
COL16A1-216ENST00000529928 SGIP1Q9BQI5 828 aa22.94■■□□□ 1.26
COL16A1-216ENST00000529928 PAPPAQ13219 1627 aa22.91■■□□□ 1.26
COL16A1-216ENST00000529928 ZNF784Q8NCA9 323 aaPredicted RBP22.91■■□□□ 1.26
COL16A1-216ENST00000529928 LTN1O94822 1766 aa22.91■■□□□ 1.26
COL16A1-216ENST00000529928 NEUROD1Q13562 356 aa22.9■■□□□ 1.26
COL16A1-216ENST00000529928 NME9Q86XW9 330 aa22.9■■□□□ 1.26
COL16A1-216ENST00000529928 CD163L1Q9NR16 1453 aa22.89■■□□□ 1.25
COL16A1-216ENST00000529928 BTAF1O14981 1849 aa22.88■■□□□ 1.25
COL16A1-216ENST00000529928 HDGFL2Q7Z4V5 671 aaPredicted RBP22.88■■□□□ 1.25
COL16A1-216ENST00000529928 ANKRD24Q8TF21 1146 aa22.88■■□□□ 1.25
COL16A1-216ENST00000529928 ARXQ96QS3 562 aa22.88■■□□□ 1.25
COL16A1-216ENST00000529928 MAP3K5Q99683 1374 aa22.87■■□□□ 1.25
COL16A1-216ENST00000529928 EDC4Q6P2E9 1401 aaKnown RBP22.86■■□□□ 1.25
COL16A1-216ENST00000529928 TMC1Q8TDI8 760 aa22.86■■□□□ 1.25
COL16A1-216ENST00000529928 ZNF827Q17R98 1081 aa22.84■■□□□ 1.25
COL16A1-216ENST00000529928 CHD4Q14839 1912 aa22.83■■□□□ 1.25
COL16A1-216ENST00000529928 CARD11Q9BXL7 1154 aa22.83■■□□□ 1.25
COL16A1-216ENST00000529928 LRRC4BQ9NT99 713 aa22.83■■□□□ 1.25
COL16A1-216ENST00000529928 TERF2IPQ9NYB0 399 aa22.83■■□□□ 1.25
COL16A1-216ENST00000529928 UTRNP46939 3433 aa22.82■■□□□ 1.24
COL16A1-216ENST00000529928 SLC12A5Q9H2X9 1139 aa22.82■■□□□ 1.24
COL16A1-216ENST00000529928 SLC27A3Q5K4L6 730 aa22.81■■□□□ 1.24
COL16A1-216ENST00000529928 SLC16A10Q8TF71 515 aa22.81■■□□□ 1.24
COL16A1-216ENST00000529928 A0A1W2PP64 1363 aa22.8■■□□□ 1.24
COL16A1-216ENST00000529928 FAM208AQ9UK61 1670 aaKnown RBP22.8■■□□□ 1.24
COL16A1-216ENST00000529928 DDX54Q8TDD1 881 aaKnown RBP22.79■■□□□ 1.24
COL16A1-216ENST00000529928 IP6K1Q92551 441 aa22.79■■□□□ 1.24
COL16A1-216ENST00000529928 AKT1S1Q96B36 256 aa22.79■■□□□ 1.24
COL16A1-216ENST00000529928 KAT6BQ8WYB5 2073 aa22.78■■□□□ 1.24
COL16A1-216ENST00000529928 QSER1Q2KHR3 1735 aa22.78■■□□□ 1.24
COL16A1-216ENST00000529928 PUS7Q96PZ0 661 aaKnown RBP22.78■■□□□ 1.24
COL16A1-216ENST00000529928 POLD1P28340 1107 aa22.76■■□□□ 1.23
COL16A1-216ENST00000529928 GPR162Q16538 588 aa22.76■■□□□ 1.23
COL16A1-216ENST00000529928 PNPLA7Q6ZV29 1317 aa22.75■■□□□ 1.23
COL16A1-216ENST00000529928 LTV1Q96GA3 475 aaPredicted RBP22.74■■□□□ 1.23
COL16A1-216ENST00000529928 TFCP2L1Q9NZI6 479 aa22.74■■□□□ 1.23
COL16A1-216ENST00000529928 ANKRD36BQ8N2N9 1353 aa22.74■■□□□ 1.23
COL16A1-216ENST00000529928 C1QTNF8P60827 252 aa22.73■■□□□ 1.23
COL16A1-216ENST00000529928 KLHL34Q8N239 644 aa22.73■■□□□ 1.23
COL16A1-216ENST00000529928 SYTL4Q96C24 671 aaPredicted RBP22.73■■□□□ 1.23
COL16A1-216ENST00000529928 COL24A1Q17RW2 1714 aa22.72■■□□□ 1.23
COL16A1-216ENST00000529928 SENP3-EIF4A1A0A087X0R7 540 aa22.71■■□□□ 1.23
COL16A1-216ENST00000529928 PRIM1P49642 420 aaKnown RBP22.71■■□□□ 1.23
COL16A1-216ENST00000529928 COG3Q96JB2 828 aa22.71■■□□□ 1.23
COL16A1-216ENST00000529928 HOXC9P31274 260 aa22.7■■□□□ 1.22
COL16A1-216ENST00000529928 MAP3K19Q56UN5 1328 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms