RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 FLT4P35916 1363 aa23.75■■□□□ 1.39
CLP1-204ENST00000529773 FBLN1P23142 703 aa23.74■■□□□ 1.39
CLP1-204ENST00000529773 ATRNO75882 1429 aa23.74■■□□□ 1.39
CLP1-204ENST00000529773 RRS1Q15050 365 aaKnown RBP23.73■■□□□ 1.39
CLP1-204ENST00000529773 IP6K1Q92551 441 aa23.73■■□□□ 1.39
CLP1-204ENST00000529773 POLKQ9UBT6 870 aa23.73■■□□□ 1.39
CLP1-204ENST00000529773 RGPD5Q99666 1765 aa23.73■■□□□ 1.39
CLP1-204ENST00000529773 UNC5CLQ8IV45 518 aa23.72■■□□□ 1.39
CLP1-204ENST00000529773 BTG4Q9NY30 223 aa23.72■■□□□ 1.39
CLP1-204ENST00000529773 RGS17Q9UGC6 210 aaPredicted RBP23.72■■□□□ 1.39
CLP1-204ENST00000529773 AXIN2Q9Y2T1 843 aa23.72■■□□□ 1.39
CLP1-204ENST00000529773 FAM208AQ9UK61 1670 aaKnown RBP23.72■■□□□ 1.39
CLP1-204ENST00000529773 INSRP06213 1382 aa23.71■■□□□ 1.39
CLP1-204ENST00000529773 HOXC9P31274 260 aa23.71■■□□□ 1.39
CLP1-204ENST00000529773 ZNF772Q68DY9 489 aaPredicted RBP23.71■■□□□ 1.39
CLP1-204ENST00000529773 EMILIN1Q9Y6C2 1016 aa23.71■■□□□ 1.39
CLP1-204ENST00000529773 USP21Q9UK80 565 aa23.7■■□□□ 1.38
CLP1-204ENST00000529773 ERBB3P21860 1342 aa23.69■■□□□ 1.38
CLP1-204ENST00000529773 TNNT2P45379 298 aaPredicted RBP23.68■■□□□ 1.38
CLP1-204ENST00000529773 AMPHP49418 695 aa23.67■■□□□ 1.38
CLP1-204ENST00000529773 RALBP1Q15311 655 aa23.67■■□□□ 1.38
CLP1-204ENST00000529773 VPS72Q15906 364 aa23.67■■□□□ 1.38
CLP1-204ENST00000529773 WDR17Q8IZU2 1322 aa23.66■■□□□ 1.38
CLP1-204ENST00000529773 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
CLP1-204ENST00000529773 GLI3P10071 1580 aa23.65■■□□□ 1.38
CLP1-204ENST00000529773 COL3A1P02461 1466 aaPredicted RBP23.65■■□□□ 1.38
CLP1-204ENST00000529773 ZBTB7CA1YPR0 619 aa23.65■■□□□ 1.38
CLP1-204ENST00000529773 TRPC5Q9UL62 973 aaPredicted RBP23.65■■□□□ 1.38
CLP1-204ENST00000529773 CRB1P82279 1406 aa23.65■■□□□ 1.38
CLP1-204ENST00000529773 PPP2R1AP30153 589 aa23.63■■□□□ 1.37
CLP1-204ENST00000529773 NCAPD2Q15021 1401 aa23.63■■□□□ 1.37
CLP1-204ENST00000529773 HSP90AB2PQ58FF8 381 aa23.63■■□□□ 1.37
CLP1-204ENST00000529773 PRKRIP1Q9H875 184 aaPredicted RBP23.63■■□□□ 1.37
CLP1-204ENST00000529773 ANKRD24Q8TF21 1146 aa23.62■■□□□ 1.37
CLP1-204ENST00000529773 SPATA31A5Q5VU36 1347 aa23.61■■□□□ 1.37
CLP1-204ENST00000529773 SPATA31A7Q8IWB4 1347 aa23.61■■□□□ 1.37
CLP1-204ENST00000529773 MTHFSP49914 203 aa23.61■■□□□ 1.37
CLP1-204ENST00000529773 LARP1Q6PKG0 1096 aaKnown RBP23.61■■□□□ 1.37
CLP1-204ENST00000529773 RGPD1P0DJD0 1748 aa23.6■■□□□ 1.37
CLP1-204ENST00000529773 WNK3Q9BYP7 1800 aa23.6■■□□□ 1.37
CLP1-204ENST00000529773 SPATA31A1Q5TZJ5 1347 aa23.59■■□□□ 1.37
CLP1-204ENST00000529773 POTEAQ6S8J7 498 aa23.59■■□□□ 1.37
CLP1-204ENST00000529773 QTRT2Q9H974 415 aaKnown RBP23.59■■□□□ 1.37
CLP1-204ENST00000529773 STRN4Q9NRL3 753 aa23.59■■□□□ 1.37
CLP1-204ENST00000529773 MYBBP1AQ9BQG0 1328 aaKnown RBP23.59■■□□□ 1.37
CLP1-204ENST00000529773 THSD7AQ9UPZ6 1657 aa23.58■■□□□ 1.37
CLP1-204ENST00000529773 EVA1CP58658 441 aa23.58■■□□□ 1.37
CLP1-204ENST00000529773 CNGB1Q14028 1251 aaPredicted RBP23.58■■□□□ 1.37
CLP1-204ENST00000529773 GJD4Q96KN9 370 aaPredicted RBP23.58■■□□□ 1.37
CLP1-204ENST00000529773 PPM1GO15355 546 aaPredicted RBP23.57■■□□□ 1.36
CLP1-204ENST00000529773 CARD10Q9BWT7 1032 aa23.57■■□□□ 1.36
CLP1-204ENST00000529773 THRAP3Q9Y2W1 955 aaKnown RBP23.56■■□□□ 1.36
CLP1-204ENST00000529773 RGPD2P0DJD1 1756 aa23.55■■□□□ 1.36
CLP1-204ENST00000529773 RBM6P78332 1123 aaKnown RBP23.55■■□□□ 1.36
CLP1-204ENST00000529773 EIF4A2Q14240 407 aaKnown RBP23.55■■□□□ 1.36
CLP1-204ENST00000529773 DISP2A7MBM2 1401 aa23.55■■□□□ 1.36
CLP1-204ENST00000529773 BARGINQ6ZT62 677 aa23.54■■□□□ 1.36
CLP1-204ENST00000529773 TOM1L2Q6ZVM7 507 aa23.54■■□□□ 1.36
CLP1-204ENST00000529773 ONECUT3O60422 494 aaPredicted RBP23.53■■□□□ 1.36
CLP1-204ENST00000529773 CSB-PGBD3P0DP91 1061 aa23.53■■□□□ 1.36
CLP1-204ENST00000529773 IL13P35225 146 aa23.52■■□□□ 1.36
CLP1-204ENST00000529773 TCP11L2Q8N4U5 519 aa23.52■■□□□ 1.36
CLP1-204ENST00000529773 PARP4Q9UKK3 1724 aaKnown RBP23.52■■□□□ 1.36
CLP1-204ENST00000529773 IGSF1Q8N6C5 1336 aa23.52■■□□□ 1.36
CLP1-204ENST00000529773 PLEKHG2Q9H7P9 1386 aa23.52■■□□□ 1.36
CLP1-204ENST00000529773 LTV1Q96GA3 475 aaPredicted RBP23.51■■□□□ 1.35
CLP1-204ENST00000529773 RXRBP28702 533 aa23.5■■□□□ 1.35
CLP1-204ENST00000529773 NBPF6Q5VWK0 638 aa23.5■■□□□ 1.35
CLP1-204ENST00000529773 NBPF4Q96M43 638 aa23.5■■□□□ 1.35
CLP1-204ENST00000529773 NLRP2Q9NX02 1062 aa23.5■■□□□ 1.35
CLP1-204ENST00000529773 RGS12O14924 1447 aa23.5■■□□□ 1.35
CLP1-204ENST00000529773 ANP32CO43423 234 aa23.49■■□□□ 1.35
CLP1-204ENST00000529773 CFAP53Q96M91 514 aa23.49■■□□□ 1.35
CLP1-204ENST00000529773 KDRP35968 1356 aa23.49■■□□□ 1.35
CLP1-204ENST00000529773 LRRC37A3O60309 1634 aa23.48■■□□□ 1.35
CLP1-204ENST00000529773 DIAPH1O60610 1272 aaKnown RBP23.48■■□□□ 1.35
CLP1-204ENST00000529773 EYA1Q99502 592 aa23.48■■□□□ 1.35
CLP1-204ENST00000529773 CCDC9Q9Y3X0 531 aaKnown RBP23.48■■□□□ 1.35
CLP1-204ENST00000529773 MEGF6O75095 1541 aa23.46■■□□□ 1.35
CLP1-204ENST00000529773 CDCA7Q9BWT1 371 aaPredicted RBP23.46■■□□□ 1.35
CLP1-204ENST00000529773 OVOS2A0A0G2JMS6 1433 aa23.44■■□□□ 1.34
CLP1-204ENST00000529773 FAM98CQ17RN3 349 aaKnown RBP23.44■■□□□ 1.34
CLP1-204ENST00000529773 USP35Q9P2H5 1018 aa23.44■■□□□ 1.34
CLP1-204ENST00000529773 PKD1L3Q7Z443 1732 aa23.43■■□□□ 1.34
CLP1-204ENST00000529773 TNS2Q63HR2 1409 aa23.42■■□□□ 1.34
CLP1-204ENST00000529773 IL2RBP14784 551 aa23.41■■□□□ 1.34
CLP1-204ENST00000529773 SHANK3Q9BYB0 1731 aa23.41■■□□□ 1.34
CLP1-204ENST00000529773 DIEXFQ68CQ4 756 aaKnown RBP23.4■■□□□ 1.34
CLP1-204ENST00000529773 USHBP1Q8N6Y0 703 aa23.4■■□□□ 1.34
CLP1-204ENST00000529773 BRWD3Q6RI45 1802 aa23.39■■□□□ 1.33
CLP1-204ENST00000529773 SEPT12Q8IYM1 358 aa23.39■■□□□ 1.33
CLP1-204ENST00000529773 NUDCQ9Y266 331 aa23.38■■□□□ 1.33
CLP1-204ENST00000529773 AEBP1Q8IUX7 1158 aa23.37■■□□□ 1.33
CLP1-204ENST00000529773 SULT6B1Q6IMI4 303 aa23.35■■□□□ 1.33
CLP1-204ENST00000529773 RAPGEF4Q8WZA2 1011 aa23.35■■□□□ 1.33
CLP1-204ENST00000529773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.34■■□□□ 1.33
CLP1-204ENST00000529773 TATP17735 454 aaPredicted RBP23.33■■□□□ 1.33
CLP1-204ENST00000529773 DDB1Q16531 1140 aa23.33■■□□□ 1.33
CLP1-204ENST00000529773 BCL9O00512 1426 aa23.33■■□□□ 1.32
CLP1-204ENST00000529773 U2SURPO15042 1029 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms