RNA–Protein interactions for RNA: ENST00000529764.1

LTBP3-215, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-215ENST00000529764 EDC4Q6P2E9 1401 aaKnown RBP9.2□□□□□ -0.94
LTBP3-215ENST00000529764 SSH2Q76I76 1423 aa9.2□□□□□ -0.94
LTBP3-215ENST00000529764 MON2Q7Z3U7 1717 aa9.19□□□□□ -0.94
LTBP3-215ENST00000529764 SOX12O15370 315 aa9.19□□□□□ -0.94
LTBP3-215ENST00000529764 FAM196AQ6ZSG2 479 aa9.19□□□□□ -0.94
LTBP3-215ENST00000529764 CDCA7Q9BWT1 371 aaPredicted RBP9.19□□□□□ -0.94
LTBP3-215ENST00000529764 PIK3C2AO00443 1686 aa9.18□□□□□ -0.94
LTBP3-215ENST00000529764 SLIT3O75094 1523 aa9.18□□□□□ -0.94
LTBP3-215ENST00000529764 CRB1P82279 1406 aa9.18□□□□□ -0.94
LTBP3-215ENST00000529764 COG3Q96JB2 828 aa9.18□□□□□ -0.94
LTBP3-215ENST00000529764 SLC12A5Q9H2X9 1139 aa9.18□□□□□ -0.94
LTBP3-215ENST00000529764 LARP1Q6PKG0 1096 aaKnown RBP9.17□□□□□ -0.94
LTBP3-215ENST00000529764 CAMTA1Q9Y6Y1 1673 aa9.16□□□□□ -0.94
LTBP3-215ENST00000529764 ABCC6O95255 1503 aa9.16□□□□□ -0.94
LTBP3-215ENST00000529764 COL5A2P05997 1499 aaPredicted RBP9.16□□□□□ -0.94
LTBP3-215ENST00000529764 USP31Q70CQ4 1352 aa9.16□□□□□ -0.94
LTBP3-215ENST00000529764 WDR17Q8IZU2 1322 aa9.16□□□□□ -0.94
LTBP3-215ENST00000529764 DDB1Q16531 1140 aa9.16□□□□□ -0.94
LTBP3-215ENST00000529764 ARHGEF25Q86VW2 580 aa9.16□□□□□ -0.94
LTBP3-215ENST00000529764 TESK2Q96S53 571 aa9.16□□□□□ -0.94
LTBP3-215ENST00000529764 RGPD1P0DJD0 1748 aa9.16□□□□□ -0.94
LTBP3-215ENST00000529764 LMO7Q8WWI1 1683 aa9.16□□□□□ -0.94
LTBP3-215ENST00000529764 A0A1W2PP64 1363 aa9.15□□□□□ -0.94
LTBP3-215ENST00000529764 ANKRD36BQ8N2N9 1353 aa9.15□□□□□ -0.94
LTBP3-215ENST00000529764 CCDC7Q96M83 1385 aa9.15□□□□□ -0.94
LTBP3-215ENST00000529764 EIF4G2P78344 907 aaKnown RBP eCLIP9.15□□□□□ -0.94
LTBP3-215ENST00000529764 NME9Q86XW9 330 aa9.15□□□□□ -0.94
LTBP3-215ENST00000529764 THSD7AQ9UPZ6 1657 aa9.15□□□□□ -0.94
LTBP3-215ENST00000529764 POLR3GLQ9BT43 218 aa9.14□□□□□ -0.95
LTBP3-215ENST00000529764 CARD10Q9BWT7 1032 aa9.14□□□□□ -0.95
LTBP3-215ENST00000529764 USP54Q70EL1 1684 aa9.13□□□□□ -0.95
LTBP3-215ENST00000529764 EXOC5O00471 708 aa9.13□□□□□ -0.95
LTBP3-215ENST00000529764 AMPHP49418 695 aa9.13□□□□□ -0.95
LTBP3-215ENST00000529764 NLRP2Q9NX02 1062 aa9.13□□□□□ -0.95
LTBP3-215ENST00000529764 LTN1O94822 1766 aa9.12□□□□□ -0.95
LTBP3-215ENST00000529764 PARP4Q9UKK3 1724 aaKnown RBP9.12□□□□□ -0.95
LTBP3-215ENST00000529764 TRIM37O94972 964 aa9.12□□□□□ -0.95
LTBP3-215ENST00000529764 APBA3O96018 575 aa9.12□□□□□ -0.95
LTBP3-215ENST00000529764 CD163L1Q9NR16 1453 aa9.12□□□□□ -0.95
LTBP3-215ENST00000529764 OVOS2A0A0G2JMS6 1433 aa9.12□□□□□ -0.95
LTBP3-215ENST00000529764 OVOS2A0A0J9YW53 1432 aa9.12□□□□□ -0.95
LTBP3-215ENST00000529764 OVOS2Q6IE36 1432 aa9.12□□□□□ -0.95
LTBP3-215ENST00000529764 SMG6Q86US8 1419 aaKnown RBP9.12□□□□□ -0.95
LTBP3-215ENST00000529764 PARD3Q8TEW0 1356 aa9.12□□□□□ -0.95
LTBP3-215ENST00000529764 NFAT5O94916 1531 aa9.11□□□□□ -0.95
LTBP3-215ENST00000529764 FAM182BQ5T319 152 aa9.11□□□□□ -0.95
LTBP3-215ENST00000529764 NBPF14Q5TI25 921 aa9.11□□□□□ -0.95
LTBP3-215ENST00000529764 DEFB132Q7Z7B7 95 aa9.11□□□□□ -0.95
LTBP3-215ENST00000529764 AXIN2Q9Y2T1 843 aa9.11□□□□□ -0.95
LTBP3-215ENST00000529764 RGPD5Q99666 1765 aa9.11□□□□□ -0.95
LTBP3-215ENST00000529764 FAM208AQ9UK61 1670 aaKnown RBP9.1□□□□□ -0.95
LTBP3-215ENST00000529764 ERBB3P21860 1342 aa9.1□□□□□ -0.95
LTBP3-215ENST00000529764 CGNL1Q0VF96 1302 aa9.1□□□□□ -0.95
LTBP3-215ENST00000529764 COL18A1P39060 1754 aa9.1□□□□□ -0.95
LTBP3-215ENST00000529764 IL2RBP14784 551 aa9.1□□□□□ -0.95
LTBP3-215ENST00000529764 ANKRD24Q8TF21 1146 aa9.1□□□□□ -0.95
LTBP3-215ENST00000529764 IP6K1Q92551 441 aa9.1□□□□□ -0.95
LTBP3-215ENST00000529764 EN1Q05925 392 aaPredicted RBP9.09□□□□□ -0.95
LTBP3-215ENST00000529764 KIF20BQ96Q89 1820 aa9.09□□□□□ -0.95
LTBP3-215ENST00000529764 RTL1A6NKG5 1358 aa9.09□□□□□ -0.95
LTBP3-215ENST00000529764 WNK3Q9BYP7 1800 aa9.08□□□□□ -0.96
LTBP3-215ENST00000529764 DISP2A7MBM2 1401 aa9.08□□□□□ -0.96
LTBP3-215ENST00000529764 LTV1Q96GA3 475 aaPredicted RBP9.08□□□□□ -0.96
LTBP3-215ENST00000529764 GGNBP2Q9H3C7 697 aa9.08□□□□□ -0.96
LTBP3-215ENST00000529764 KIF24Q5T7B8 1368 aa9.08□□□□□ -0.96
LTBP3-215ENST00000529764 EP400Q96L91 3159 aa9.07□□□□□ -0.96
LTBP3-215ENST00000529764 LRRC37A3O60309 1634 aa9.07□□□□□ -0.96
LTBP3-215ENST00000529764 FYB1O15117 783 aa9.07□□□□□ -0.96
LTBP3-215ENST00000529764 HMGB2P26583 209 aaKnown RBP9.07□□□□□ -0.96
LTBP3-215ENST00000529764 NSD3Q9BZ95 1437 aa9.06□□□□□ -0.96
LTBP3-215ENST00000529764 TNS1Q9HBL0 1735 aaKnown RBP9.06□□□□□ -0.96
LTBP3-215ENST00000529764 HSPA5P11021 654 aaKnown RBP9.06□□□□□ -0.96
LTBP3-215ENST00000529764 HOXC9P31274 260 aa9.06□□□□□ -0.96
LTBP3-215ENST00000529764 EZH2Q15910 746 aaKnown RBP9.06□□□□□ -0.96
LTBP3-215ENST00000529764 RAPGEF4Q8WZA2 1011 aa9.06□□□□□ -0.96
LTBP3-215ENST00000529764 BCL11BQ9C0K0 894 aaPredicted RBP9.06□□□□□ -0.96
LTBP3-215ENST00000529764 MAP3K19Q56UN5 1328 aa9.05□□□□□ -0.96
LTBP3-215ENST00000529764 TNS2Q63HR2 1409 aa9.05□□□□□ -0.96
LTBP3-215ENST00000529764 FLT4P35916 1363 aa9.05□□□□□ -0.96
LTBP3-215ENST00000529764 PLSCR1O15162 318 aa9.05□□□□□ -0.96
LTBP3-215ENST00000529764 PPM1GO15355 546 aaPredicted RBP9.05□□□□□ -0.96
LTBP3-215ENST00000529764 BCL9O00512 1426 aa9.05□□□□□ -0.96
LTBP3-215ENST00000529764 KAT6BQ8WYB5 2073 aa9.04□□□□□ -0.96
LTBP3-215ENST00000529764 NPM3O75607 178 aaKnown RBP9.04□□□□□ -0.96
LTBP3-215ENST00000529764 RRS1Q15050 365 aaKnown RBP9.04□□□□□ -0.96
LTBP3-215ENST00000529764 CAMKK2Q96RR4 588 aa9.04□□□□□ -0.96
LTBP3-215ENST00000529764 KNSTRNQ9Y448 316 aa9.04□□□□□ -0.96
LTBP3-215ENST00000529764 MYOM1P52179 1685 aa9.04□□□□□ -0.96
LTBP3-215ENST00000529764 SBF2Q86WG5 1849 aa9.03□□□□□ -0.96
LTBP3-215ENST00000529764 NSD2O96028 1365 aa9.03□□□□□ -0.96
LTBP3-215ENST00000529764 TATP17735 454 aaPredicted RBP9.03□□□□□ -0.96
LTBP3-215ENST00000529764 MARCH10Q8NA82 808 aaPredicted RBP9.03□□□□□ -0.96
LTBP3-215ENST00000529764 DDX54Q8TDD1 881 aaKnown RBP9.03□□□□□ -0.96
LTBP3-215ENST00000529764 INSRP06213 1382 aa9.02□□□□□ -0.97
LTBP3-215ENST00000529764 RGPD3A6NKT7 1758 aaPredicted RBP9.02□□□□□ -0.97
LTBP3-215ENST00000529764 RGPD4Q7Z3J3 1758 aa9.02□□□□□ -0.97
LTBP3-215ENST00000529764 PSDA5PKW4 1024 aaPredicted RBP9.02□□□□□ -0.97
LTBP3-215ENST00000529764 R3HDM1Q15032 1099 aaKnown RBP9.02□□□□□ -0.97
LTBP3-215ENST00000529764 ZCRB1Q8TBF4 217 aaKnown RBP9.02□□□□□ -0.97
LTBP3-215ENST00000529764 PANK3Q9H999 370 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms