RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 WNK3Q9BYP7 1800 aa21.66■■□□□ 1.06
CCDC90B-215ENST00000529745 PARP4Q9UKK3 1724 aaKnown RBP21.65■■□□□ 1.06
CCDC90B-215ENST00000529745 FAM98CQ17RN3 349 aaKnown RBP21.63■■□□□ 1.05
CCDC90B-215ENST00000529745 BARGINQ6ZT62 677 aa21.62■■□□□ 1.05
CCDC90B-215ENST00000529745 NME9Q86XW9 330 aa21.62■■□□□ 1.05
CCDC90B-215ENST00000529745 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.62■■□□□ 1.053e-6■■■■□ 25.7
CCDC90B-215ENST00000529745 STRN4Q9NRL3 753 aa21.62■■□□□ 1.05
CCDC90B-215ENST00000529745 CRB1P82279 1406 aa21.62■■□□□ 1.05
CCDC90B-215ENST00000529745 KIF20BQ96Q89 1820 aa21.62■■□□□ 1.05
CCDC90B-215ENST00000529745 YY1P25490 414 aa21.61■■□□□ 1.05
CCDC90B-215ENST00000529745 EVA1CP58658 441 aa21.61■■□□□ 1.05
CCDC90B-215ENST00000529745 KRT27Q7Z3Y8 459 aa21.61■■□□□ 1.05
CCDC90B-215ENST00000529745 THRAP3Q9Y2W1 955 aaKnown RBP21.61■■□□□ 1.05
CCDC90B-215ENST00000529745 LARP1Q6PKG0 1096 aaKnown RBP21.6■■□□□ 1.05
CCDC90B-215ENST00000529745 RGPD1P0DJD0 1748 aa21.58■■□□□ 1.05
CCDC90B-215ENST00000529745 EIF4G2P78344 907 aaKnown RBP eCLIP21.58■■□□□ 1.05
CCDC90B-215ENST00000529745 WDR17Q8IZU2 1322 aa21.57■■□□□ 1.04
CCDC90B-215ENST00000529745 BAG6P46379 1132 aa21.57■■□□□ 1.04
CCDC90B-215ENST00000529745 AXIN2Q9Y2T1 843 aa21.57■■□□□ 1.04
CCDC90B-215ENST00000529745 TCP11L2Q8N4U5 519 aa21.56■■□□□ 1.04
CCDC90B-215ENST00000529745 FAM208AQ9UK61 1670 aaKnown RBP21.56■■□□□ 1.04
CCDC90B-215ENST00000529745 POTEDQ86YR6 584 aa21.55■■□□□ 1.04
CCDC90B-215ENST00000529745 TNS1Q9HBL0 1735 aaKnown RBP21.54■■□□□ 1.04
CCDC90B-215ENST00000529745 LRRC37A3O60309 1634 aa21.54■■□□□ 1.04
CCDC90B-215ENST00000529745 A0A0G2JS52 829 aa21.53■■□□□ 1.04
CCDC90B-215ENST00000529745 MYT1Q01538 1121 aa21.53■■□□□ 1.04
CCDC90B-215ENST00000529745 ZBTB7CA1YPR0 619 aa21.52■■□□□ 1.04
CCDC90B-215ENST00000529745 HSPA5P11021 654 aaKnown RBP21.52■■□□□ 1.04
CCDC90B-215ENST00000529745 PIAS4Q8N2W9 510 aaPredicted RBP21.52■■□□□ 1.04
CCDC90B-215ENST00000529745 SOX12O15370 315 aa21.51■■□□□ 1.03
CCDC90B-215ENST00000529745 R3HDM1Q15032 1099 aaKnown RBP21.51■■□□□ 1.03
CCDC90B-215ENST00000529745 COG3Q96JB2 828 aa21.51■■□□□ 1.03
CCDC90B-215ENST00000529745 PEAK1Q9H792 1746 aa21.51■■□□□ 1.03
CCDC90B-215ENST00000529745 ANKRD26Q9UPS8 1709 aa21.5■■□□□ 1.03
CCDC90B-215ENST00000529745 FYB1O15117 783 aa21.5■■□□□ 1.03
CCDC90B-215ENST00000529745 CARD10Q9BWT7 1032 aa21.5■■□□□ 1.03
CCDC90B-215ENST00000529745 USP35Q9P2H5 1018 aa21.5■■□□□ 1.03
CCDC90B-215ENST00000529745 DISP2A7MBM2 1401 aa21.49■■□□□ 1.03
CCDC90B-215ENST00000529745 TOM1L2Q6ZVM7 507 aa21.49■■□□□ 1.03
CCDC90B-215ENST00000529745 ERBB3P21860 1342 aa21.49■■□□□ 1.03
CCDC90B-215ENST00000529745 CCDC7Q96M83 1385 aa21.48■■□□□ 1.03
CCDC90B-215ENST00000529745 SBF2Q86WG5 1849 aa21.48■■□□□ 1.03
CCDC90B-215ENST00000529745 EN1Q05925 392 aaPredicted RBP21.47■■□□□ 1.03
CCDC90B-215ENST00000529745 CDCA7Q9BWT1 371 aaPredicted RBP21.47■■□□□ 1.03
CCDC90B-215ENST00000529745 CARD14Q9BXL6 1004 aa21.47■■□□□ 1.03
CCDC90B-215ENST00000529745 NSD3Q9BZ95 1437 aa21.46■■□□□ 1.03
CCDC90B-215ENST00000529745 RTL1A6NKG5 1358 aa21.46■■□□□ 1.03
CCDC90B-215ENST00000529745 FAM196AQ6ZSG2 479 aa21.45■■□□□ 1.02
CCDC90B-215ENST00000529745 IP6K1Q92551 441 aa21.45■■□□□ 1.02
CCDC90B-215ENST00000529745 C11orf95C9JLR9 678 aaPredicted RBP21.44■■□□□ 1.02
CCDC90B-215ENST00000529745 PDE3BQ13370 1112 aa21.43■■□□□ 1.02
CCDC90B-215ENST00000529745 MAP3K19Q56UN5 1328 aa21.43■■□□□ 1.02
CCDC90B-215ENST00000529745 KIF24Q5T7B8 1368 aa21.43■■□□□ 1.02
CCDC90B-215ENST00000529745 BCL9O00512 1426 aa21.42■■□□□ 1.02
CCDC90B-215ENST00000529745 CSB-PGBD3P0DP91 1061 aa21.42■■□□□ 1.02
CCDC90B-215ENST00000529745 GGNBP2Q9H3C7 697 aa21.42■■□□□ 1.02
CCDC90B-215ENST00000529745 RGPD2P0DJD1 1756 aa21.41■■□□□ 1.02
CCDC90B-215ENST00000529745 OVOS2A0A0G2JMS6 1433 aa21.41■■□□□ 1.02
CCDC90B-215ENST00000529745 FAM182BQ5T319 152 aa21.41■■□□□ 1.02
CCDC90B-215ENST00000529745 ANKRD24Q8TF21 1146 aa21.41■■□□□ 1.02
CCDC90B-215ENST00000529745 MAP2P11137 1827 aaKnown RBP21.4■■□□□ 1.02
CCDC90B-215ENST00000529745 RGPD3A6NKT7 1758 aaPredicted RBP21.4■■□□□ 1.02
CCDC90B-215ENST00000529745 RGPD4Q7Z3J3 1758 aa21.4■■□□□ 1.02
CCDC90B-215ENST00000529745 TNS2Q63HR2 1409 aa21.39■■□□□ 1.02
CCDC90B-215ENST00000529745 HOXC9P31274 260 aa21.39■■□□□ 1.01
CCDC90B-215ENST00000529745 DDB1Q16531 1140 aa21.39■■□□□ 1.01
CCDC90B-215ENST00000529745 RREB1Q92766 1687 aa21.38■■□□□ 1.01
CCDC90B-215ENST00000529745 CGNL1Q0VF96 1302 aa21.38■■□□□ 1.01
CCDC90B-215ENST00000529745 IFFO2Q5TF58 517 aa21.38■■□□□ 1.01
CCDC90B-215ENST00000529745 FBLN1P23142 703 aa21.35■■□□□ 1.01
CCDC90B-215ENST00000529745 AMPHP49418 695 aa21.35■■□□□ 1.01
CCDC90B-215ENST00000529745 INSRP06213 1382 aa21.35■■□□□ 1.01
CCDC90B-215ENST00000529745 EZH2Q15910 746 aaKnown RBP21.34■■□□□ 1.01
CCDC90B-215ENST00000529745 NLRP2Q9NX02 1062 aa21.34■■□□□ 1.01
CCDC90B-215ENST00000529745 NSD2O96028 1365 aa21.34■■□□□ 1.01
CCDC90B-215ENST00000529745 FLT4P35916 1363 aa21.34■■□□□ 1.01
CCDC90B-215ENST00000529745 PARD3Q8TEW0 1356 aa21.34■■□□□ 1.01
CCDC90B-215ENST00000529745 RRS1Q15050 365 aaKnown RBP21.33■■□□□ 1.01
CCDC90B-215ENST00000529745 SHANK3Q9BYB0 1731 aa21.32■■□□□ 1
CCDC90B-215ENST00000529745 EXOC5O00471 708 aa21.32■■□□□ 1
CCDC90B-215ENST00000529745 TRIM37O94972 964 aa21.32■■□□□ 1
CCDC90B-215ENST00000529745 IL2RBP14784 551 aa21.32■■□□□ 1
CCDC90B-215ENST00000529745 MARCH10Q8NA82 808 aaPredicted RBP21.32■■□□□ 1
CCDC90B-215ENST00000529745 POLR3GLQ9BT43 218 aa21.32■■□□□ 1
CCDC90B-215ENST00000529745 NHSQ6T4R5 1651 aa21.31■■□□□ 1
CCDC90B-215ENST00000529745 PANK3Q9H999 370 aa21.31■■□□□ 1
CCDC90B-215ENST00000529745 KIF7Q2M1P5 1343 aa21.3■■□□□ 1
CCDC90B-215ENST00000529745 SMG6Q86US8 1419 aaKnown RBP21.3■■□□□ 1
CCDC90B-215ENST00000529745 NUP188Q5SRE5 1749 aa21.3■■□□□ 1
CCDC90B-215ENST00000529745 ADRA2BP18089 450 aa21.3■■□□□ 1
CCDC90B-215ENST00000529745 CAMKK2Q96RR4 588 aa21.3■■□□□ 1
CCDC90B-215ENST00000529745 DCAF8L1A6NGE4 600 aa21.29■■□□□ 1
CCDC90B-215ENST00000529745 NCAPD2Q15021 1401 aa21.29■■□□□ 1
CCDC90B-215ENST00000529745 LTV1Q96GA3 475 aaPredicted RBP21.26■□□□□ 0.99
CCDC90B-215ENST00000529745 WASHC2AQ641Q2 1341 aa21.26■□□□□ 0.99
CCDC90B-215ENST00000529745 APBA3O96018 575 aa21.25■□□□□ 0.99
CCDC90B-215ENST00000529745 HSP90AB2PQ58FF8 381 aa21.25■□□□□ 0.99
CCDC90B-215ENST00000529745 BCL11BQ9C0K0 894 aaPredicted RBP21.25■□□□□ 0.99
CCDC90B-215ENST00000529745 EMILIN1Q9Y6C2 1016 aa21.25■□□□□ 0.99
CCDC90B-215ENST00000529745 MEGF6O75095 1541 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms