RNA–Protein interactions for RNA: ENST00000529520.5

GPATCH4-214, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-214ENST00000529520 CARD11Q9BXL7 1154 aa11.7□□□□□ -0.54
GPATCH4-214ENST00000529520 LRRC37A3O60309 1634 aa11.7□□□□□ -0.54
GPATCH4-214ENST00000529520 LTN1O94822 1766 aa11.69□□□□□ -0.54
GPATCH4-214ENST00000529520 KTN1Q86UP2 1357 aaKnown RBP11.69□□□□□ -0.54
GPATCH4-214ENST00000529520 TOM1L2Q6ZVM7 507 aa11.69□□□□□ -0.54
GPATCH4-214ENST00000529520 KAT6BQ8WYB5 2073 aa11.68□□□□□ -0.54
GPATCH4-214ENST00000529520 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.68□□□□□ -0.54
GPATCH4-214ENST00000529520 SLC12A5Q9H2X9 1139 aa11.68□□□□□ -0.54
GPATCH4-214ENST00000529520 NFAT5O94916 1531 aa11.68□□□□□ -0.54
GPATCH4-214ENST00000529520 WDR17Q8IZU2 1322 aa11.67□□□□□ -0.54
GPATCH4-214ENST00000529520 TTC21AQ8NDW8 1320 aa11.67□□□□□ -0.54
GPATCH4-214ENST00000529520 NME9Q86XW9 330 aa11.67□□□□□ -0.54
GPATCH4-214ENST00000529520 SBNO2Q9Y2G9 1366 aa11.67□□□□□ -0.54
GPATCH4-214ENST00000529520 USP54Q70EL1 1684 aa11.66□□□□□ -0.54
GPATCH4-214ENST00000529520 DDB1Q16531 1140 aa11.66□□□□□ -0.54
GPATCH4-214ENST00000529520 MARCH10Q8NA82 808 aaPredicted RBP11.66□□□□□ -0.54
GPATCH4-214ENST00000529520 KCNH5Q8NCM2 988 aa11.66□□□□□ -0.54
GPATCH4-214ENST00000529520 TMC1Q8TDI8 760 aa11.66□□□□□ -0.54
GPATCH4-214ENST00000529520 TONSLQ96HA7 1378 aa11.66□□□□□ -0.54
GPATCH4-214ENST00000529520 USP31Q70CQ4 1352 aa11.65□□□□□ -0.55
GPATCH4-214ENST00000529520 CARD10Q9BWT7 1032 aa11.64□□□□□ -0.55
GPATCH4-214ENST00000529520 OVOS2A0A0G2JMS6 1433 aa11.63□□□□□ -0.55
GPATCH4-214ENST00000529520 OVOS2A0A0J9YW53 1432 aa11.63□□□□□ -0.55
GPATCH4-214ENST00000529520 OVOS2Q6IE36 1432 aa11.63□□□□□ -0.55
GPATCH4-214ENST00000529520 CSB-PGBD3P0DP91 1061 aa11.63□□□□□ -0.55
GPATCH4-214ENST00000529520 FBLN1P23142 703 aa11.63□□□□□ -0.55
GPATCH4-214ENST00000529520 PROM2Q8N271 834 aa11.63□□□□□ -0.55
GPATCH4-214ENST00000529520 TESK2Q96S53 571 aa11.63□□□□□ -0.55
GPATCH4-214ENST00000529520 RGPD2P0DJD1 1756 aa11.63□□□□□ -0.55
GPATCH4-214ENST00000529520 A0A1W2PP64 1363 aa11.63□□□□□ -0.55
GPATCH4-214ENST00000529520 PARD3Q8TEW0 1356 aa11.63□□□□□ -0.55
GPATCH4-214ENST00000529520 ST20-MTHFSA0A0A6YYL1 179 aa11.62□□□□□ -0.55
GPATCH4-214ENST00000529520 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
GPATCH4-214ENST00000529520 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
GPATCH4-214ENST00000529520 PLSCR1O15162 318 aa11.61□□□□□ -0.55
GPATCH4-214ENST00000529520 EXOC5O00471 708 aa11.6□□□□□ -0.55
GPATCH4-214ENST00000529520 KCNQ2O43526 872 aa11.6□□□□□ -0.55
GPATCH4-214ENST00000529520 HDGFL2Q7Z4V5 671 aaPredicted RBP11.6□□□□□ -0.55
GPATCH4-214ENST00000529520 BCL11BQ9C0K0 894 aaPredicted RBP11.6□□□□□ -0.55
GPATCH4-214ENST00000529520 PDGFDQ9GZP0 370 aaPredicted RBP11.6□□□□□ -0.55
GPATCH4-214ENST00000529520 ANO8Q9HCE9 1232 aaPredicted RBP11.6□□□□□ -0.55
GPATCH4-214ENST00000529520 ERBB3P21860 1342 aa11.6□□□□□ -0.55
GPATCH4-214ENST00000529520 TRIM26Q12899 539 aaPredicted RBP11.59□□□□□ -0.55
GPATCH4-214ENST00000529520 NBPF14Q5TI25 921 aa11.59□□□□□ -0.55
GPATCH4-214ENST00000529520 CDCA7Q9BWT1 371 aaPredicted RBP11.59□□□□□ -0.55
GPATCH4-214ENST00000529520 EDC4Q6P2E9 1401 aaKnown RBP11.59□□□□□ -0.55
GPATCH4-214ENST00000529520 CCDC7Q96M83 1385 aa11.58□□□□□ -0.56
GPATCH4-214ENST00000529520 ANKRD24Q8TF21 1146 aa11.58□□□□□ -0.56
GPATCH4-214ENST00000529520 PUS7Q96PZ0 661 aaKnown RBP11.58□□□□□ -0.56
GPATCH4-214ENST00000529520 NLRP2Q9NX02 1062 aa11.58□□□□□ -0.56
GPATCH4-214ENST00000529520 ABCC6O95255 1503 aa11.58□□□□□ -0.56
GPATCH4-214ENST00000529520 CASZ1Q86V15 1759 aa11.58□□□□□ -0.56
GPATCH4-214ENST00000529520 BCL9O00512 1426 aa11.58□□□□□ -0.56
GPATCH4-214ENST00000529520 C11orf95C9JLR9 678 aaPredicted RBP11.57□□□□□ -0.56
GPATCH4-214ENST00000529520 ACSBG1Q96GR2 724 aa11.57□□□□□ -0.56
GPATCH4-214ENST00000529520 TERF2IPQ9NYB0 399 aa11.57□□□□□ -0.56
GPATCH4-214ENST00000529520 BTAF1O14981 1849 aa11.57□□□□□ -0.56
GPATCH4-214ENST00000529520 NHSQ6T4R5 1651 aa11.56□□□□□ -0.56
GPATCH4-214ENST00000529520 TNS2Q63HR2 1409 aa11.56□□□□□ -0.56
GPATCH4-214ENST00000529520 IP6K1Q92551 441 aa11.56□□□□□ -0.56
GPATCH4-214ENST00000529520 LTV1Q96GA3 475 aaPredicted RBP11.56□□□□□ -0.56
GPATCH4-214ENST00000529520 IL2RBP14784 551 aa11.55□□□□□ -0.56
GPATCH4-214ENST00000529520 TXNRD1Q16881 649 aa11.55□□□□□ -0.56
GPATCH4-214ENST00000529520 SHANK3Q9BYB0 1731 aa11.55□□□□□ -0.56
GPATCH4-214ENST00000529520 MAP3K19Q56UN5 1328 aa11.54□□□□□ -0.56
GPATCH4-214ENST00000529520 FAM208AQ9UK61 1670 aaKnown RBP11.53□□□□□ -0.56
GPATCH4-214ENST00000529520 FYB1O15117 783 aa11.53□□□□□ -0.56
GPATCH4-214ENST00000529520 SPON1Q9HCB6 807 aa11.53□□□□□ -0.56
GPATCH4-214ENST00000529520 KIF20BQ96Q89 1820 aa11.52□□□□□ -0.57
GPATCH4-214ENST00000529520 HOXC9P31274 260 aa11.52□□□□□ -0.57
GPATCH4-214ENST00000529520 RRS1Q15050 365 aaKnown RBP11.52□□□□□ -0.57
GPATCH4-214ENST00000529520 COG3Q96JB2 828 aa11.52□□□□□ -0.57
GPATCH4-214ENST00000529520 GGNBP2Q9H3C7 697 aa11.52□□□□□ -0.57
GPATCH4-214ENST00000529520 ANKRD36BQ8N2N9 1353 aa11.52□□□□□ -0.57
GPATCH4-214ENST00000529520 USP47Q96K76 1375 aa11.52□□□□□ -0.57
GPATCH4-214ENST00000529520 ZBTB7AO95365 584 aa11.51□□□□□ -0.57
GPATCH4-214ENST00000529520 SLC15A2Q16348 729 aa11.51□□□□□ -0.57
GPATCH4-214ENST00000529520 DDX54Q8TDD1 881 aaKnown RBP11.51□□□□□ -0.57
GPATCH4-214ENST00000529520 ATF5Q9Y2D1 282 aaPredicted RBP11.51□□□□□ -0.57
GPATCH4-214ENST00000529520 MYOM1P52179 1685 aa11.51□□□□□ -0.57
GPATCH4-214ENST00000529520 NINLQ9Y2I6 1382 aa11.51□□□□□ -0.57
GPATCH4-214ENST00000529520 UTRNP46939 3433 aa11.51□□□□□ -0.57
GPATCH4-214ENST00000529520 PAPPAQ13219 1627 aa11.5□□□□□ -0.57
GPATCH4-214ENST00000529520 AMPHP49418 695 aa11.5□□□□□ -0.57
GPATCH4-214ENST00000529520 TMF1P82094 1093 aa11.5□□□□□ -0.57
GPATCH4-214ENST00000529520 CARD14Q9BXL6 1004 aa11.5□□□□□ -0.57
GPATCH4-214ENST00000529520 LRRC4BQ9NT99 713 aa11.5□□□□□ -0.57
GPATCH4-214ENST00000529520 DOT1LQ8TEK3 1739 aa11.49□□□□□ -0.57
GPATCH4-214ENST00000529520 MAP2P11137 1827 aaKnown RBP11.49□□□□□ -0.57
GPATCH4-214ENST00000529520 TUBGCP6Q96RT7 1819 aa11.49□□□□□ -0.57
GPATCH4-214ENST00000529520 PTGER2P43116 358 aa11.49□□□□□ -0.57
GPATCH4-214ENST00000529520 NBPF6Q5VWK0 638 aa11.49□□□□□ -0.57
GPATCH4-214ENST00000529520 NBPF4Q96M43 638 aa11.49□□□□□ -0.57
GPATCH4-214ENST00000529520 PPP1R1BQ9UD71 204 aaPredicted RBP11.49□□□□□ -0.57
GPATCH4-214ENST00000529520 KCNQ4P56696 695 aa11.48□□□□□ -0.57
GPATCH4-214ENST00000529520 USHBP1Q8N6Y0 703 aa11.48□□□□□ -0.57
GPATCH4-214ENST00000529520 STK32BQ9NY57 414 aa11.48□□□□□ -0.57
GPATCH4-214ENST00000529520 MEGF6O75095 1541 aa11.48□□□□□ -0.57
GPATCH4-214ENST00000529520 LY75O60449 1722 aa11.47□□□□□ -0.57
GPATCH4-214ENST00000529520 SLC24A1O60721 1099 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms