RNA–Protein interactions for RNA: ENST00000529500.1

PSMC3-206, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-206ENST00000529500 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
PSMC3-206ENST00000529500 CPSF1Q10570 1443 aaKnown RBP18.34■□□□□ 0.53
PSMC3-206ENST00000529500 A0A1W2PP64 1363 aa18.34■□□□□ 0.53
PSMC3-206ENST00000529500 CHRNA2Q15822 529 aa18.34■□□□□ 0.53
PSMC3-206ENST00000529500 RGS12O14924 1447 aa18.33■□□□□ 0.53
PSMC3-206ENST00000529500 KCNH5Q8NCM2 988 aa18.33■□□□□ 0.52
PSMC3-206ENST00000529500 SSH2Q76I76 1423 aa18.32■□□□□ 0.52
PSMC3-206ENST00000529500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.32■□□□□ 0.52
PSMC3-206ENST00000529500 UPF1Q92900 1129 aaKnown RBP eCLIP18.32■□□□□ 0.52
PSMC3-206ENST00000529500 CPDO75976 1380 aa18.31■□□□□ 0.52
PSMC3-206ENST00000529500 ONECUT3O60422 494 aaPredicted RBP18.31■□□□□ 0.52
PSMC3-206ENST00000529500 CFAP53Q96M91 514 aa18.31■□□□□ 0.52
PSMC3-206ENST00000529500 CD163L1Q9NR16 1453 aa18.31■□□□□ 0.52
PSMC3-206ENST00000529500 ZBTB7CA1YPR0 619 aa18.3■□□□□ 0.52
PSMC3-206ENST00000529500 SEPT12Q8IYM1 358 aa18.3■□□□□ 0.52
PSMC3-206ENST00000529500 STRN4Q9NRL3 753 aa18.3■□□□□ 0.52
PSMC3-206ENST00000529500 ZNF521Q96K83 1311 aa18.29■□□□□ 0.52
PSMC3-206ENST00000529500 A0A0G2JS52 829 aa18.29■□□□□ 0.52
PSMC3-206ENST00000529500 MYT1Q01538 1121 aa18.29■□□□□ 0.52
PSMC3-206ENST00000529500 COL14A1Q05707 1796 aaKnown RBP18.29■□□□□ 0.52
PSMC3-206ENST00000529500 NCBP3Q53F19 620 aaKnown RBP18.28■□□□□ 0.52
PSMC3-206ENST00000529500 ABCA3Q99758 1704 aa18.28■□□□□ 0.52
PSMC3-206ENST00000529500 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.28■□□□□ 0.52
PSMC3-206ENST00000529500 NWD2Q9ULI1 1742 aa18.28■□□□□ 0.52
PSMC3-206ENST00000529500 SPATA31A5Q5VU36 1347 aa18.27■□□□□ 0.52
PSMC3-206ENST00000529500 SPATA31A7Q8IWB4 1347 aa18.27■□□□□ 0.52
PSMC3-206ENST00000529500 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.52
PSMC3-206ENST00000529500 RCAN3Q9UKA8 241 aa18.27■□□□□ 0.52
PSMC3-206ENST00000529500 IRX6P78412 446 aaPredicted RBP18.26■□□□□ 0.51
PSMC3-206ENST00000529500 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
PSMC3-206ENST00000529500 SOX12O15370 315 aa18.25■□□□□ 0.51
PSMC3-206ENST00000529500 AATKQ6ZMQ8 1374 aa18.25■□□□□ 0.51
PSMC3-206ENST00000529500 MTHFSP49914 203 aa18.24■□□□□ 0.51
PSMC3-206ENST00000529500 GOLGA2Q08379 1002 aa18.24■□□□□ 0.51
PSMC3-206ENST00000529500 KRT27Q7Z3Y8 459 aa18.24■□□□□ 0.51
PSMC3-206ENST00000529500 ARHGEF25Q86VW2 580 aa18.24■□□□□ 0.51
PSMC3-206ENST00000529500 NME9Q86XW9 330 aa18.24■□□□□ 0.51
PSMC3-206ENST00000529500 CCDC125Q86Z20 511 aa18.24■□□□□ 0.51
PSMC3-206ENST00000529500 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
PSMC3-206ENST00000529500 USP31Q70CQ4 1352 aa18.24■□□□□ 0.51
PSMC3-206ENST00000529500 PLCH1Q4KWH8 1693 aa18.24■□□□□ 0.51
PSMC3-206ENST00000529500 SPATA31A1Q5TZJ5 1347 aa18.23■□□□□ 0.51
PSMC3-206ENST00000529500 FYB1O15117 783 aa18.23■□□□□ 0.51
PSMC3-206ENST00000529500 RRP1P56182 461 aaKnown RBP18.23■□□□□ 0.51
PSMC3-206ENST00000529500 CRYBG1Q9Y4K1 1723 aa18.23■□□□□ 0.51
PSMC3-206ENST00000529500 CDCA7LQ96GN5 454 aa18.22■□□□□ 0.51
PSMC3-206ENST00000529500 USP35Q9P2H5 1018 aa18.22■□□□□ 0.51
PSMC3-206ENST00000529500 ZRANB1Q9UGI0 708 aa18.22■□□□□ 0.51
PSMC3-206ENST00000529500 PHRF1Q9P1Y6 1649 aaKnown RBP18.22■□□□□ 0.51
PSMC3-206ENST00000529500 GLI3P10071 1580 aa18.21■□□□□ 0.51
PSMC3-206ENST00000529500 ANKRD26Q9UPS8 1709 aa18.21■□□□□ 0.51
PSMC3-206ENST00000529500 SENP3-EIF4A1A0A087X0R7 540 aa18.21■□□□□ 0.51
PSMC3-206ENST00000529500 LARP1Q6PKG0 1096 aaKnown RBP18.21■□□□□ 0.51
PSMC3-206ENST00000529500 RUNDC1Q96C34 613 aa18.21■□□□□ 0.51
PSMC3-206ENST00000529500 COG3Q96JB2 828 aa18.21■□□□□ 0.51
PSMC3-206ENST00000529500 THRAP3Q9Y2W1 955 aaKnown RBP18.21■□□□□ 0.51
PSMC3-206ENST00000529500 AKAP12Q02952 1782 aa18.21■□□□□ 0.51
PSMC3-206ENST00000529500 SLIT3O75094 1523 aa18.2■□□□□ 0.5
PSMC3-206ENST00000529500 BARGINQ6ZT62 677 aa18.2■□□□□ 0.5
PSMC3-206ENST00000529500 TRMT2AQ8IZ69 625 aaKnown RBP18.2■□□□□ 0.5
PSMC3-206ENST00000529500 TCP11L2Q8N4U5 519 aa18.2■□□□□ 0.5
PSMC3-206ENST00000529500 NRKQ7Z2Y5 1582 aa18.2■□□□□ 0.5
PSMC3-206ENST00000529500 APAF1O14727 1248 aa18.19■□□□□ 0.5
PSMC3-206ENST00000529500 SLFN5Q08AF3 891 aa18.19■□□□□ 0.5
PSMC3-206ENST00000529500 CAMTA1Q9Y6Y1 1673 aa18.18■□□□□ 0.5
PSMC3-206ENST00000529500 CSB-PGBD3P0DP91 1061 aa18.18■□□□□ 0.5
PSMC3-206ENST00000529500 TNNT2P45379 298 aaPredicted RBP18.18■□□□□ 0.5
PSMC3-206ENST00000529500 SF3B2Q13435 895 aaKnown RBP18.18■□□□□ 0.5
PSMC3-206ENST00000529500 DUSP27Q5VZP5 1158 aa18.18■□□□□ 0.5
PSMC3-206ENST00000529500 TOM1L2Q6ZVM7 507 aa18.18■□□□□ 0.5
PSMC3-206ENST00000529500 GGNBP2Q9H3C7 697 aa18.18■□□□□ 0.5
PSMC3-206ENST00000529500 PIK3C2AO00443 1686 aa18.18■□□□□ 0.5
PSMC3-206ENST00000529500 E9PSI1 815 aa18.17■□□□□ 0.5
PSMC3-206ENST00000529500 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
PSMC3-206ENST00000529500 AXIN2Q9Y2T1 843 aa18.17■□□□□ 0.5
PSMC3-206ENST00000529500 NRAPQ86VF7 1730 aa18.16■□□□□ 0.5
PSMC3-206ENST00000529500 CCDC27Q2M243 656 aa18.16■□□□□ 0.5
PSMC3-206ENST00000529500 MON2Q7Z3U7 1717 aa18.15■□□□□ 0.5
PSMC3-206ENST00000529500 COL3A1P02461 1466 aaPredicted RBP18.15■□□□□ 0.5
PSMC3-206ENST00000529500 WDR17Q8IZU2 1322 aa18.15■□□□□ 0.5
PSMC3-206ENST00000529500 CRB1P82279 1406 aa18.15■□□□□ 0.5
PSMC3-206ENST00000529500 COL5A2P05997 1499 aaPredicted RBP18.14■□□□□ 0.49
PSMC3-206ENST00000529500 CDCA7Q9BWT1 371 aaPredicted RBP18.13■□□□□ 0.49
PSMC3-206ENST00000529500 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
PSMC3-206ENST00000529500 TSHZ2Q9NRE2 1034 aa18.13■□□□□ 0.49
PSMC3-206ENST00000529500 KIF20BQ96Q89 1820 aa18.13■□□□□ 0.49
PSMC3-206ENST00000529500 WDR63Q8IWG1 891 aa18.12■□□□□ 0.49
PSMC3-206ENST00000529500 CARD10Q9BWT7 1032 aa18.12■□□□□ 0.49
PSMC3-206ENST00000529500 AMPHP49418 695 aa18.11■□□□□ 0.49
PSMC3-206ENST00000529500 FAM196AQ6ZSG2 479 aa18.11■□□□□ 0.49
PSMC3-206ENST00000529500 WWC1Q8IX03 1113 aa18.11■□□□□ 0.49
PSMC3-206ENST00000529500 IP6K1Q92551 441 aa18.11■□□□□ 0.49
PSMC3-206ENST00000529500 LMO7Q8WWI1 1683 aa18.11■□□□□ 0.49
PSMC3-206ENST00000529500 OVOS2A0A0J9YW53 1432 aa18.1■□□□□ 0.49
PSMC3-206ENST00000529500 OVOS2Q6IE36 1432 aa18.1■□□□□ 0.49
PSMC3-206ENST00000529500 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.1■□□□□ 0.49
PSMC3-206ENST00000529500 NFAT5O94916 1531 aa18.09■□□□□ 0.49
PSMC3-206ENST00000529500 U2AF1L5P0DN76 240 aaPredicted RBP18.09■□□□□ 0.49
PSMC3-206ENST00000529500 U2AF1Q01081 240 aaKnown RBP eCLIP18.09■□□□□ 0.49
PSMC3-206ENST00000529500 NLRP2Q9NX02 1062 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms