RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 COL18A1P39060 1754 aa15.85■□□□□ 0.13
C9orf135-207ENST00000529446 FBLN1P23142 703 aa15.84■□□□□ 0.13
C9orf135-207ENST00000529446 HOXC9P31274 260 aa15.84■□□□□ 0.13
C9orf135-207ENST00000529446 MTHFSP49914 203 aa15.84■□□□□ 0.13
C9orf135-207ENST00000529446 FNBP4Q8N3X1 1017 aaPredicted RBP15.84■□□□□ 0.13
C9orf135-207ENST00000529446 NGLY1Q96IV0 654 aa15.84■□□□□ 0.13
C9orf135-207ENST00000529446 CFAP53Q96M91 514 aa15.84■□□□□ 0.13
C9orf135-207ENST00000529446 NWD2Q9ULI1 1742 aa15.84■□□□□ 0.13
C9orf135-207ENST00000529446 SLIT2O94813 1529 aa15.84■□□□□ 0.13
C9orf135-207ENST00000529446 MAP2P11137 1827 aaKnown RBP15.83■□□□□ 0.12
C9orf135-207ENST00000529446 ZBTB7CA1YPR0 619 aa15.83■□□□□ 0.12
C9orf135-207ENST00000529446 CHRNA2Q15822 529 aa15.83■□□□□ 0.12
C9orf135-207ENST00000529446 C8orf37Q96NL8 207 aa15.83■□□□□ 0.12
C9orf135-207ENST00000529446 PEAK1Q9H792 1746 aa15.82■□□□□ 0.12
C9orf135-207ENST00000529446 PPM1GO15355 546 aaPredicted RBP15.82■□□□□ 0.12
C9orf135-207ENST00000529446 BTG4Q9NY30 223 aa15.82■□□□□ 0.12
C9orf135-207ENST00000529446 PLCH1Q4KWH8 1693 aa15.82■□□□□ 0.12
C9orf135-207ENST00000529446 CAMTA1Q9Y6Y1 1673 aa15.82■□□□□ 0.12
C9orf135-207ENST00000529446 COL5A2P05997 1499 aaPredicted RBP15.81■□□□□ 0.12
C9orf135-207ENST00000529446 ERBB3P21860 1342 aa15.8■□□□□ 0.12
C9orf135-207ENST00000529446 AXIN2Q9Y2T1 843 aa15.8■□□□□ 0.12
C9orf135-207ENST00000529446 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.8■□□□□ 0.12
C9orf135-207ENST00000529446 EVA1CP58658 441 aa15.79■□□□□ 0.12
C9orf135-207ENST00000529446 HSP90AB2PQ58FF8 381 aa15.79■□□□□ 0.12
C9orf135-207ENST00000529446 UNC5CLQ8IV45 518 aa15.79■□□□□ 0.12
C9orf135-207ENST00000529446 ANKRD24Q8TF21 1146 aa15.79■□□□□ 0.12
C9orf135-207ENST00000529446 FAM208AQ9UK61 1670 aaKnown RBP15.79■□□□□ 0.12
C9orf135-207ENST00000529446 AFF2P51816 1311 aa15.78■□□□□ 0.12
C9orf135-207ENST00000529446 WDR17Q8IZU2 1322 aa15.78■□□□□ 0.12
C9orf135-207ENST00000529446 NRAPQ86VF7 1730 aa15.78■□□□□ 0.12
C9orf135-207ENST00000529446 USP21Q9UK80 565 aa15.78■□□□□ 0.12
C9orf135-207ENST00000529446 COL3A1P02461 1466 aaPredicted RBP15.78■□□□□ 0.12
C9orf135-207ENST00000529446 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
C9orf135-207ENST00000529446 DIAPH1O60610 1272 aaKnown RBP15.77■□□□□ 0.12
C9orf135-207ENST00000529446 ZNF772Q68DY9 489 aaPredicted RBP15.77■□□□□ 0.12
C9orf135-207ENST00000529446 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
C9orf135-207ENST00000529446 EIF4A2Q14240 407 aaKnown RBP15.76■□□□□ 0.11
C9orf135-207ENST00000529446 VPS72Q15906 364 aa15.76■□□□□ 0.11
C9orf135-207ENST00000529446 NUDCQ9Y266 331 aa15.76■□□□□ 0.11
C9orf135-207ENST00000529446 CRB1P82279 1406 aa15.76■□□□□ 0.11
C9orf135-207ENST00000529446 CSB-PGBD3P0DP91 1061 aa15.75■□□□□ 0.11
C9orf135-207ENST00000529446 IL13P35225 146 aa15.75■□□□□ 0.11
C9orf135-207ENST00000529446 CARD10Q9BWT7 1032 aa15.74■□□□□ 0.11
C9orf135-207ENST00000529446 STRN4Q9NRL3 753 aa15.74■□□□□ 0.11
C9orf135-207ENST00000529446 TRPC5Q9UL62 973 aaPredicted RBP15.74■□□□□ 0.11
C9orf135-207ENST00000529446 RGPD5Q99666 1765 aa15.74■□□□□ 0.11
C9orf135-207ENST00000529446 TOM1L2Q6ZVM7 507 aa15.73■□□□□ 0.11
C9orf135-207ENST00000529446 LTV1Q96GA3 475 aaPredicted RBP15.73■□□□□ 0.11
C9orf135-207ENST00000529446 THRAP3Q9Y2W1 955 aaKnown RBP15.73■□□□□ 0.11
C9orf135-207ENST00000529446 ATRNO75882 1429 aa15.73■□□□□ 0.11
C9orf135-207ENST00000529446 NCAPD2Q15021 1401 aa15.73■□□□□ 0.11
C9orf135-207ENST00000529446 LARP1Q6PKG0 1096 aaKnown RBP15.72■□□□□ 0.11
C9orf135-207ENST00000529446 PLEKHG2Q9H7P9 1386 aa15.72■□□□□ 0.11
C9orf135-207ENST00000529446 SPATA31A5Q5VU36 1347 aa15.71■□□□□ 0.11
C9orf135-207ENST00000529446 SPATA31A7Q8IWB4 1347 aa15.71■□□□□ 0.11
C9orf135-207ENST00000529446 IGSF1Q8N6C5 1336 aa15.71■□□□□ 0.11
C9orf135-207ENST00000529446 NLRP2Q9NX02 1062 aa15.71■□□□□ 0.11
C9orf135-207ENST00000529446 RGPD1P0DJD0 1748 aa15.71■□□□□ 0.1
C9orf135-207ENST00000529446 SPATA31A1Q5TZJ5 1347 aa15.7■□□□□ 0.1
C9orf135-207ENST00000529446 MIER1Q8N108 512 aa15.7■□□□□ 0.1
C9orf135-207ENST00000529446 EYA1Q99502 592 aa15.7■□□□□ 0.1
C9orf135-207ENST00000529446 QTRT2Q9H974 415 aaKnown RBP15.7■□□□□ 0.1
C9orf135-207ENST00000529446 MRS2Q9HD23 443 aa15.7■□□□□ 0.1
C9orf135-207ENST00000529446 KDRP35968 1356 aa15.7■□□□□ 0.1
C9orf135-207ENST00000529446 U2SURPO15042 1029 aaKnown RBP15.69■□□□□ 0.1
C9orf135-207ENST00000529446 NBPF6Q5VWK0 638 aa15.69■□□□□ 0.1
C9orf135-207ENST00000529446 NBPF4Q96M43 638 aa15.69■□□□□ 0.1
C9orf135-207ENST00000529446 CDCA7Q9BWT1 371 aaPredicted RBP15.69■□□□□ 0.1
C9orf135-207ENST00000529446 WDR43Q15061 677 aaKnown RBP eCLIP15.68■□□□□ 0.1
C9orf135-207ENST00000529446 BARGINQ6ZT62 677 aa15.68■□□□□ 0.1
C9orf135-207ENST00000529446 TCP11L2Q8N4U5 519 aa15.68■□□□□ 0.1
C9orf135-207ENST00000529446 GJD4Q96KN9 370 aaPredicted RBP15.68■□□□□ 0.1
C9orf135-207ENST00000529446 PNNQ9H307 717 aaKnown RBP15.68■□□□□ 0.1
C9orf135-207ENST00000529446 CCDC9Q9Y3X0 531 aaKnown RBP15.68■□□□□ 0.1
C9orf135-207ENST00000529446 FCHSD2O94868 740 aa15.66■□□□□ 0.1
C9orf135-207ENST00000529446 U2AF1L5P0DN76 240 aaPredicted RBP15.66■□□□□ 0.1
C9orf135-207ENST00000529446 RBM6P78332 1123 aaKnown RBP15.66■□□□□ 0.1
C9orf135-207ENST00000529446 U2AF1Q01081 240 aaKnown RBP eCLIP15.66■□□□□ 0.1
C9orf135-207ENST00000529446 SULT6B1Q6IMI4 303 aa15.66■□□□□ 0.1
C9orf135-207ENST00000529446 PNISRQ8TF01 805 aaKnown RBP15.65■□□□□ 0.1
C9orf135-207ENST00000529446 RAPGEF4Q8WZA2 1011 aa15.65■□□□□ 0.1
C9orf135-207ENST00000529446 GLI3P10071 1580 aa15.65■□□□□ 0.1
C9orf135-207ENST00000529446 DISP2A7MBM2 1401 aa15.64■□□□□ 0.09
C9orf135-207ENST00000529446 IL2RBP14784 551 aa15.64■□□□□ 0.09
C9orf135-207ENST00000529446 TATP17735 454 aaPredicted RBP15.64■□□□□ 0.09
C9orf135-207ENST00000529446 CCDC184Q52MB2 194 aa15.64■□□□□ 0.09
C9orf135-207ENST00000529446 RGS17Q9UGC6 210 aaPredicted RBP15.64■□□□□ 0.09
C9orf135-207ENST00000529446 RGPD2P0DJD1 1756 aa15.63■□□□□ 0.09
C9orf135-207ENST00000529446 ONECUT3O60422 494 aaPredicted RBP15.63■□□□□ 0.09
C9orf135-207ENST00000529446 RXRBP28702 533 aa15.63■□□□□ 0.09
C9orf135-207ENST00000529446 USHBP1Q8N6Y0 703 aa15.63■□□□□ 0.09
C9orf135-207ENST00000529446 USP35Q9P2H5 1018 aa15.63■□□□□ 0.09
C9orf135-207ENST00000529446 OVOS2A0A0G2JMS6 1433 aa15.62■□□□□ 0.09
C9orf135-207ENST00000529446 WNK3Q9BYP7 1800 aa15.62■□□□□ 0.09
C9orf135-207ENST00000529446 RSPH6AQ9H0K4 717 aa15.62■□□□□ 0.09
C9orf135-207ENST00000529446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.62■□□□□ 0.09
C9orf135-207ENST00000529446 PARP4Q9UKK3 1724 aaKnown RBP15.62■□□□□ 0.09
C9orf135-207ENST00000529446 NEFMP07197 916 aa15.61■□□□□ 0.09
C9orf135-207ENST00000529446 HMOX1P09601 288 aa15.61■□□□□ 0.09
C9orf135-207ENST00000529446 FAM98CQ17RN3 349 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms