RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 USP31Q70CQ4 1352 aa17.09■□□□□ 0.33
SORL1-208ENST00000529445 EDC4Q6P2E9 1401 aaKnown RBP17.09■□□□□ 0.33
SORL1-208ENST00000529445 LTN1O94822 1766 aa17.09■□□□□ 0.33
SORL1-208ENST00000529445 LRP5O75197 1615 aa17.08■□□□□ 0.32
SORL1-208ENST00000529445 NINLQ9Y2I6 1382 aa17.08■□□□□ 0.32
SORL1-208ENST00000529445 SOX12O15370 315 aa17.08■□□□□ 0.32
SORL1-208ENST00000529445 TRIM37O94972 964 aa17.08■□□□□ 0.32
SORL1-208ENST00000529445 EN1Q05925 392 aaPredicted RBP17.08■□□□□ 0.32
SORL1-208ENST00000529445 TOM1L2Q6ZVM7 507 aa17.08■□□□□ 0.32
SORL1-208ENST00000529445 PUS7Q96PZ0 661 aaKnown RBP17.08■□□□□ 0.32
SORL1-208ENST00000529445 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
SORL1-208ENST00000529445 RREB1Q92766 1687 aa17.07■□□□□ 0.32
SORL1-208ENST00000529445 PARD3Q8TEW0 1356 aa17.07■□□□□ 0.32
SORL1-208ENST00000529445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.32
SORL1-208ENST00000529445 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
SORL1-208ENST00000529445 OVOS2A0A0G2JMS6 1433 aa17.06■□□□□ 0.32
SORL1-208ENST00000529445 OVOS2A0A0J9YW53 1432 aa17.06■□□□□ 0.32
SORL1-208ENST00000529445 OVOS2Q6IE36 1432 aa17.06■□□□□ 0.32
SORL1-208ENST00000529445 A0A1W2PP64 1363 aa17.06■□□□□ 0.32
SORL1-208ENST00000529445 C11orf95C9JLR9 678 aaPredicted RBP17.06■□□□□ 0.32
SORL1-208ENST00000529445 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
SORL1-208ENST00000529445 AXIN2Q9Y2T1 843 aa17.06■□□□□ 0.32
SORL1-208ENST00000529445 SBF2Q86WG5 1849 aa17.05■□□□□ 0.32
SORL1-208ENST00000529445 SLC12A5Q9H2X9 1139 aa17.05■□□□□ 0.32
SORL1-208ENST00000529445 ST20-MTHFSA0A0A6YYL1 179 aa17.04■□□□□ 0.32
SORL1-208ENST00000529445 APBA3O96018 575 aa17.04■□□□□ 0.32
SORL1-208ENST00000529445 CSB-PGBD3P0DP91 1061 aa17.04■□□□□ 0.32
SORL1-208ENST00000529445 NME9Q86XW9 330 aa17.04■□□□□ 0.32
SORL1-208ENST00000529445 TESK2Q96S53 571 aa17.04■□□□□ 0.32
SORL1-208ENST00000529445 CDCA7Q9BWT1 371 aaPredicted RBP17.04■□□□□ 0.32
SORL1-208ENST00000529445 RGPD3A6NKT7 1758 aaPredicted RBP17.04■□□□□ 0.32
SORL1-208ENST00000529445 RGPD4Q7Z3J3 1758 aa17.04■□□□□ 0.32
SORL1-208ENST00000529445 NUP188Q5SRE5 1749 aa17.04■□□□□ 0.32
SORL1-208ENST00000529445 DDB1Q16531 1140 aa17.03■□□□□ 0.32
SORL1-208ENST00000529445 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
SORL1-208ENST00000529445 PSDA5PKW4 1024 aaPredicted RBP17.02■□□□□ 0.32
SORL1-208ENST00000529445 EZH2Q15910 746 aaKnown RBP17.02■□□□□ 0.32
SORL1-208ENST00000529445 CAMKK2Q96RR4 588 aa17.02■□□□□ 0.32
SORL1-208ENST00000529445 USP47Q96K76 1375 aa17.02■□□□□ 0.31
SORL1-208ENST00000529445 CCDC7Q96M83 1385 aa17.02■□□□□ 0.31
SORL1-208ENST00000529445 FAM208AQ9UK61 1670 aaKnown RBP17■□□□□ 0.31
SORL1-208ENST00000529445 ERBB3P21860 1342 aa16.98■□□□□ 0.31
SORL1-208ENST00000529445 BCL9O00512 1426 aa16.98■□□□□ 0.31
SORL1-208ENST00000529445 TNS2Q63HR2 1409 aa16.98■□□□□ 0.31
SORL1-208ENST00000529445 R3HDM1Q15032 1099 aaKnown RBP16.98■□□□□ 0.31
SORL1-208ENST00000529445 ANKRD36BQ8N2N9 1353 aa16.98■□□□□ 0.31
SORL1-208ENST00000529445 TMF1P82094 1093 aa16.97■□□□□ 0.31
SORL1-208ENST00000529445 CLSPNQ9HAW4 1339 aa16.96■□□□□ 0.31
SORL1-208ENST00000529445 TIMELESSQ9UNS1 1208 aa16.95■□□□□ 0.3
SORL1-208ENST00000529445 KIF20BQ96Q89 1820 aa16.95■□□□□ 0.3
SORL1-208ENST00000529445 MARCH10Q8NA82 808 aaPredicted RBP16.94■□□□□ 0.3
SORL1-208ENST00000529445 NLRP2Q9NX02 1062 aa16.94■□□□□ 0.3
SORL1-208ENST00000529445 EXOC5O00471 708 aa16.93■□□□□ 0.3
SORL1-208ENST00000529445 CDCA8Q53HL2 280 aa16.93■□□□□ 0.3
SORL1-208ENST00000529445 NBPF14Q5TI25 921 aa16.93■□□□□ 0.3
SORL1-208ENST00000529445 ANKRD24Q8TF21 1146 aa16.93■□□□□ 0.3
SORL1-208ENST00000529445 COG3Q96JB2 828 aa16.93■□□□□ 0.3
SORL1-208ENST00000529445 BCL11BQ9C0K0 894 aaPredicted RBP16.93■□□□□ 0.3
SORL1-208ENST00000529445 NHSQ6T4R5 1651 aa16.93■□□□□ 0.3
SORL1-208ENST00000529445 MYOM1P52179 1685 aa16.92■□□□□ 0.3
SORL1-208ENST00000529445 PLSCR1O15162 318 aa16.9■□□□□ 0.3
SORL1-208ENST00000529445 IL2RBP14784 551 aa16.9■□□□□ 0.3
SORL1-208ENST00000529445 IP6K1Q92551 441 aa16.9■□□□□ 0.3
SORL1-208ENST00000529445 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
SORL1-208ENST00000529445 RTL1A6NKG5 1358 aa16.89■□□□□ 0.29
SORL1-208ENST00000529445 KAT6BQ8WYB5 2073 aa16.88■□□□□ 0.29
SORL1-208ENST00000529445 MAP3K19Q56UN5 1328 aa16.88■□□□□ 0.29
SORL1-208ENST00000529445 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
SORL1-208ENST00000529445 PTF1AQ7RTS3 328 aa16.87■□□□□ 0.29
SORL1-208ENST00000529445 HOXC9P31274 260 aa16.86■□□□□ 0.29
SORL1-208ENST00000529445 AMPHP49418 695 aa16.86■□□□□ 0.29
SORL1-208ENST00000529445 LTV1Q96GA3 475 aaPredicted RBP16.86■□□□□ 0.29
SORL1-208ENST00000529445 BTAF1O14981 1849 aa16.86■□□□□ 0.29
SORL1-208ENST00000529445 FYB1O15117 783 aa16.84■□□□□ 0.29
SORL1-208ENST00000529445 GGNBP2Q9H3C7 697 aa16.84■□□□□ 0.29
SORL1-208ENST00000529445 SMG6Q86US8 1419 aaKnown RBP16.84■□□□□ 0.29
SORL1-208ENST00000529445 CASZ1Q86V15 1759 aa16.84■□□□□ 0.29
SORL1-208ENST00000529445 SHANK3Q9BYB0 1731 aa16.82■□□□□ 0.28
SORL1-208ENST00000529445 NSD3Q9BZ95 1437 aa16.82■□□□□ 0.28
SORL1-208ENST00000529445 KCNQ2O43526 872 aa16.81■□□□□ 0.28
SORL1-208ENST00000529445 FBLN1P23142 703 aa16.81■□□□□ 0.28
SORL1-208ENST00000529445 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
SORL1-208ENST00000529445 TXNRD1Q16881 649 aa16.81■□□□□ 0.28
SORL1-208ENST00000529445 ACSBG1Q96GR2 724 aa16.81■□□□□ 0.28
SORL1-208ENST00000529445 ANO8Q9HCE9 1232 aaPredicted RBP16.81■□□□□ 0.28
SORL1-208ENST00000529445 DOT1LQ8TEK3 1739 aa16.81■□□□□ 0.28
SORL1-208ENST00000529445 KIF24Q5T7B8 1368 aa16.8■□□□□ 0.28
SORL1-208ENST00000529445 ANKRD26Q9UPS8 1709 aa16.8■□□□□ 0.28
SORL1-208ENST00000529445 PROM2Q8N271 834 aa16.8■□□□□ 0.28
SORL1-208ENST00000529445 MEGF6O75095 1541 aa16.8■□□□□ 0.28
SORL1-208ENST00000529445 FLT4P35916 1363 aa16.79■□□□□ 0.28
SORL1-208ENST00000529445 PAPPAQ13219 1627 aa16.79■□□□□ 0.28
SORL1-208ENST00000529445 SPON1Q9HCB6 807 aa16.79■□□□□ 0.28
SORL1-208ENST00000529445 CCER1Q8TC90 406 aaPredicted RBP16.78■□□□□ 0.28
SORL1-208ENST00000529445 CARD14Q9BXL6 1004 aa16.78■□□□□ 0.28
SORL1-208ENST00000529445 INSRP06213 1382 aa16.77■□□□□ 0.28
SORL1-208ENST00000529445 DDX54Q8TDD1 881 aaKnown RBP16.77■□□□□ 0.28
SORL1-208ENST00000529445 STK32BQ9NY57 414 aa16.77■□□□□ 0.28
SORL1-208ENST00000529445 PPP1R1BQ9UD71 204 aaPredicted RBP16.76■□□□□ 0.27
SORL1-208ENST00000529445 CGNL1Q0VF96 1302 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms