RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 DISP2A7MBM2 1401 aa16.96■□□□□ 0.3
COPB1-206ENST00000529210 A0A0G2JS52 829 aa16.95■□□□□ 0.3
COPB1-206ENST00000529210 MYT1Q01538 1121 aa16.95■□□□□ 0.3
COPB1-206ENST00000529210 WDR17Q8IZU2 1322 aa16.95■□□□□ 0.3
COPB1-206ENST00000529210 ANKRD36BQ8N2N9 1353 aa16.94■□□□□ 0.3
COPB1-206ENST00000529210 TMF1P82094 1093 aa16.94■□□□□ 0.3
COPB1-206ENST00000529210 AXIN2Q9Y2T1 843 aa16.94■□□□□ 0.3
COPB1-206ENST00000529210 RGPD5Q99666 1765 aa16.94■□□□□ 0.3
COPB1-206ENST00000529210 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
COPB1-206ENST00000529210 TNS1Q9HBL0 1735 aaKnown RBP16.93■□□□□ 0.3
COPB1-206ENST00000529210 SF3B2Q13435 895 aaKnown RBP16.93■□□□□ 0.3
COPB1-206ENST00000529210 NME9Q86XW9 330 aa16.93■□□□□ 0.3
COPB1-206ENST00000529210 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.3
COPB1-206ENST00000529210 CDCA8Q53HL2 280 aa16.92■□□□□ 0.3
COPB1-206ENST00000529210 FAM196AQ6ZSG2 479 aa16.92■□□□□ 0.3
COPB1-206ENST00000529210 USP35Q9P2H5 1018 aa16.91■□□□□ 0.3
COPB1-206ENST00000529210 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
COPB1-206ENST00000529210 LTN1O94822 1766 aa16.91■□□□□ 0.3
COPB1-206ENST00000529210 LRRC37A3O60309 1634 aa16.9■□□□□ 0.3
COPB1-206ENST00000529210 C11orf95C9JLR9 678 aaPredicted RBP16.9■□□□□ 0.3
COPB1-206ENST00000529210 CARD10Q9BWT7 1032 aa16.9■□□□□ 0.3
COPB1-206ENST00000529210 BAG6P46379 1132 aa16.89■□□□□ 0.29
COPB1-206ENST00000529210 DEFB132Q7Z7B7 95 aa16.89■□□□□ 0.29
COPB1-206ENST00000529210 CDCA7Q9BWT1 371 aaPredicted RBP16.89■□□□□ 0.29
COPB1-206ENST00000529210 PEAK1Q9H792 1746 aa16.89■□□□□ 0.29
COPB1-206ENST00000529210 PDE3BQ13370 1112 aa16.88■□□□□ 0.29
COPB1-206ENST00000529210 TOM1L2Q6ZVM7 507 aa16.88■□□□□ 0.29
COPB1-206ENST00000529210 CCDC7Q96M83 1385 aa16.88■□□□□ 0.29
COPB1-206ENST00000529210 MYOM1P52179 1685 aa16.88■□□□□ 0.29
COPB1-206ENST00000529210 BCL9O00512 1426 aa16.87■□□□□ 0.29
COPB1-206ENST00000529210 ZBTB7CA1YPR0 619 aa16.87■□□□□ 0.29
COPB1-206ENST00000529210 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
COPB1-206ENST00000529210 ERBB3P21860 1342 aa16.87■□□□□ 0.29
COPB1-206ENST00000529210 SOX12O15370 315 aa16.86■□□□□ 0.29
COPB1-206ENST00000529210 CCER1Q8TC90 406 aaPredicted RBP16.85■□□□□ 0.29
COPB1-206ENST00000529210 PARD3Q8TEW0 1356 aa16.85■□□□□ 0.29
COPB1-206ENST00000529210 OVOS2A0A0G2JMS6 1433 aa16.85■□□□□ 0.29
COPB1-206ENST00000529210 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
COPB1-206ENST00000529210 DDB1Q16531 1140 aa16.83■□□□□ 0.28
COPB1-206ENST00000529210 SRCAPQ6ZRS2 3230 aa16.83■□□□□ 0.28
COPB1-206ENST00000529210 SBF2Q86WG5 1849 aa16.83■□□□□ 0.28
COPB1-206ENST00000529210 IP6K1Q92551 441 aa16.83■□□□□ 0.28
COPB1-206ENST00000529210 COG3Q96JB2 828 aa16.83■□□□□ 0.28
COPB1-206ENST00000529210 FYB1O15117 783 aa16.82■□□□□ 0.28
COPB1-206ENST00000529210 CSB-PGBD3P0DP91 1061 aa16.82■□□□□ 0.28
COPB1-206ENST00000529210 KIF20BQ96Q89 1820 aa16.82■□□□□ 0.28
COPB1-206ENST00000529210 RGPD3A6NKT7 1758 aaPredicted RBP16.82■□□□□ 0.28
COPB1-206ENST00000529210 RGPD4Q7Z3J3 1758 aa16.82■□□□□ 0.28
COPB1-206ENST00000529210 TRIM37O94972 964 aa16.81■□□□□ 0.28
COPB1-206ENST00000529210 EN1Q05925 392 aaPredicted RBP16.81■□□□□ 0.28
COPB1-206ENST00000529210 CAMKK2Q96RR4 588 aa16.81■□□□□ 0.28
COPB1-206ENST00000529210 RREB1Q92766 1687 aa16.81■□□□□ 0.28
COPB1-206ENST00000529210 TNS2Q63HR2 1409 aa16.8■□□□□ 0.28
COPB1-206ENST00000529210 RTL1A6NKG5 1358 aa16.8■□□□□ 0.28
COPB1-206ENST00000529210 MAP3K19Q56UN5 1328 aa16.79■□□□□ 0.28
COPB1-206ENST00000529210 EIF4G2P78344 907 aaKnown RBP eCLIP16.79■□□□□ 0.28
COPB1-206ENST00000529210 ANKRD24Q8TF21 1146 aa16.79■□□□□ 0.28
COPB1-206ENST00000529210 KIF24Q5T7B8 1368 aa16.78■□□□□ 0.28
COPB1-206ENST00000529210 MARCH10Q8NA82 808 aaPredicted RBP16.78■□□□□ 0.28
COPB1-206ENST00000529210 EXOC5O00471 708 aa16.77■□□□□ 0.28
COPB1-206ENST00000529210 CARD14Q9BXL6 1004 aa16.77■□□□□ 0.28
COPB1-206ENST00000529210 APBA3O96018 575 aa16.76■□□□□ 0.27
COPB1-206ENST00000529210 HOXC9P31274 260 aa16.76■□□□□ 0.27
COPB1-206ENST00000529210 EZH2Q15910 746 aaKnown RBP16.76■□□□□ 0.27
COPB1-206ENST00000529210 GGNBP2Q9H3C7 697 aa16.76■□□□□ 0.27
COPB1-206ENST00000529210 NSD3Q9BZ95 1437 aa16.76■□□□□ 0.27
COPB1-206ENST00000529210 PLSCR1O15162 318 aa16.75■□□□□ 0.27
COPB1-206ENST00000529210 IL2RBP14784 551 aa16.75■□□□□ 0.27
COPB1-206ENST00000529210 NLRP2Q9NX02 1062 aa16.75■□□□□ 0.27
COPB1-206ENST00000529210 NUP188Q5SRE5 1749 aa16.75■□□□□ 0.27
COPB1-206ENST00000529210 LRP5O75197 1615 aa16.74■□□□□ 0.27
COPB1-206ENST00000529210 HSPA5P11021 654 aaKnown RBP16.74■□□□□ 0.27
COPB1-206ENST00000529210 BCL11BQ9C0K0 894 aaPredicted RBP16.74■□□□□ 0.27
COPB1-206ENST00000529210 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
COPB1-206ENST00000529210 AMPHP49418 695 aa16.73■□□□□ 0.27
COPB1-206ENST00000529210 FBLN1P23142 703 aa16.72■□□□□ 0.27
COPB1-206ENST00000529210 INSRP06213 1382 aa16.72■□□□□ 0.27
COPB1-206ENST00000529210 NHSQ6T4R5 1651 aa16.72■□□□□ 0.27
COPB1-206ENST00000529210 FLT4P35916 1363 aa16.71■□□□□ 0.27
COPB1-206ENST00000529210 CGNL1Q0VF96 1302 aa16.7■□□□□ 0.26
COPB1-206ENST00000529210 RGPD2P0DJD1 1756 aa16.7■□□□□ 0.26
COPB1-206ENST00000529210 RRS1Q15050 365 aaKnown RBP16.7■□□□□ 0.26
COPB1-206ENST00000529210 SMG6Q86US8 1419 aaKnown RBP16.68■□□□□ 0.26
COPB1-206ENST00000529210 NCAPD2Q15021 1401 aa16.67■□□□□ 0.26
COPB1-206ENST00000529210 SHANK3Q9BYB0 1731 aa16.67■□□□□ 0.26
COPB1-206ENST00000529210 PTF1AQ7RTS3 328 aa16.66■□□□□ 0.26
COPB1-206ENST00000529210 LTV1Q96GA3 475 aaPredicted RBP16.66■□□□□ 0.26
COPB1-206ENST00000529210 MAP2P11137 1827 aaKnown RBP16.66■□□□□ 0.26
COPB1-206ENST00000529210 MEGF6O75095 1541 aa16.65■□□□□ 0.26
COPB1-206ENST00000529210 NSD2O96028 1365 aa16.65■□□□□ 0.26
COPB1-206ENST00000529210 PSDA5PKW4 1024 aaPredicted RBP16.65■□□□□ 0.26
COPB1-206ENST00000529210 R3HDM1Q15032 1099 aaKnown RBP16.65■□□□□ 0.26
COPB1-206ENST00000529210 NBPF14Q5TI25 921 aa16.65■□□□□ 0.26
COPB1-206ENST00000529210 NBPF6Q5VWK0 638 aa16.65■□□□□ 0.26
COPB1-206ENST00000529210 NBPF4Q96M43 638 aa16.65■□□□□ 0.26
COPB1-206ENST00000529210 HSP90AB2PQ58FF8 381 aa16.64■□□□□ 0.25
COPB1-206ENST00000529210 PROM2Q8N271 834 aa16.64■□□□□ 0.25
COPB1-206ENST00000529210 WASHC2AQ641Q2 1341 aa16.64■□□□□ 0.25
COPB1-206ENST00000529210 EMILIN1Q9Y6C2 1016 aa16.63■□□□□ 0.25
COPB1-206ENST00000529210 BTAF1O14981 1849 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms