RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 SLIT3O75094 1523 aa19.43■□□□□ 0.7
HIF3A-212ENST00000529205 EXOC5O00471 708 aa19.43■□□□□ 0.7
HIF3A-212ENST00000529205 STK32BQ9NY57 414 aa19.43■□□□□ 0.7
HIF3A-212ENST00000529205 PEAK1Q9H792 1746 aa19.42■□□□□ 0.7
HIF3A-212ENST00000529205 ANO8Q9HCE9 1232 aaPredicted RBP19.42■□□□□ 0.7
HIF3A-212ENST00000529205 LRRC37A3O60309 1634 aa19.42■□□□□ 0.7
HIF3A-212ENST00000529205 MARCH10Q8NA82 808 aaPredicted RBP19.41■□□□□ 0.7
HIF3A-212ENST00000529205 CARD10Q9BWT7 1032 aa19.41■□□□□ 0.7
HIF3A-212ENST00000529205 AXIN2Q9Y2T1 843 aa19.41■□□□□ 0.7
HIF3A-212ENST00000529205 BCL9O00512 1426 aa19.41■□□□□ 0.7
HIF3A-212ENST00000529205 ZBTB7AO95365 584 aa19.4■□□□□ 0.7
HIF3A-212ENST00000529205 ARHGEF25Q86VW2 580 aa19.4■□□□□ 0.7
HIF3A-212ENST00000529205 SOX12O15370 315 aa19.39■□□□□ 0.69
HIF3A-212ENST00000529205 TXNRD1Q16881 649 aa19.39■□□□□ 0.69
HIF3A-212ENST00000529205 CPSF1Q10570 1443 aaKnown RBP19.39■□□□□ 0.69
HIF3A-212ENST00000529205 QRICH2Q9H0J4 1663 aa19.39■□□□□ 0.69
HIF3A-212ENST00000529205 PTF1AQ7RTS3 328 aa19.38■□□□□ 0.69
HIF3A-212ENST00000529205 SBF2Q86WG5 1849 aa19.38■□□□□ 0.69
HIF3A-212ENST00000529205 PROM2Q8N271 834 aa19.38■□□□□ 0.69
HIF3A-212ENST00000529205 TTC21AQ8NDW8 1320 aa19.38■□□□□ 0.69
HIF3A-212ENST00000529205 ATF5Q9Y2D1 282 aaPredicted RBP19.38■□□□□ 0.69
HIF3A-212ENST00000529205 CCDC7Q96M83 1385 aa19.37■□□□□ 0.69
HIF3A-212ENST00000529205 TTC21BQ7Z4L5 1316 aa19.37■□□□□ 0.69
HIF3A-212ENST00000529205 SLC15A2Q16348 729 aa19.37■□□□□ 0.69
HIF3A-212ENST00000529205 PDGFDQ9GZP0 370 aaPredicted RBP19.35■□□□□ 0.69
HIF3A-212ENST00000529205 MTFR1LQ9H019 292 aa19.35■□□□□ 0.69
HIF3A-212ENST00000529205 COL18A1P39060 1754 aa19.34■□□□□ 0.69
HIF3A-212ENST00000529205 AKAP12Q02952 1782 aa19.34■□□□□ 0.69
HIF3A-212ENST00000529205 CASZ1Q86V15 1759 aa19.34■□□□□ 0.69
HIF3A-212ENST00000529205 PIK3C2AO00443 1686 aa19.34■□□□□ 0.69
HIF3A-212ENST00000529205 PTGER2P43116 358 aa19.34■□□□□ 0.69
HIF3A-212ENST00000529205 SYT17Q9BSW7 474 aa19.32■□□□□ 0.68
HIF3A-212ENST00000529205 FHDC1Q9C0D6 1143 aaPredicted RBP19.32■□□□□ 0.68
HIF3A-212ENST00000529205 TRPM1Q7Z4N2 1603 aa19.32■□□□□ 0.68
HIF3A-212ENST00000529205 WNK3Q9BYP7 1800 aa19.32■□□□□ 0.68
HIF3A-212ENST00000529205 KTN1Q86UP2 1357 aaKnown RBP19.32■□□□□ 0.68
HIF3A-212ENST00000529205 L3MBTL2Q969R5 705 aa19.31■□□□□ 0.68
HIF3A-212ENST00000529205 TNS2Q63HR2 1409 aa19.29■□□□□ 0.68
HIF3A-212ENST00000529205 ZNF784Q8NCA9 323 aaPredicted RBP19.29■□□□□ 0.68
HIF3A-212ENST00000529205 NLRP2Q9NX02 1062 aa19.29■□□□□ 0.68
HIF3A-212ENST00000529205 ROCK2O75116 1388 aaKnown RBP19.29■□□□□ 0.68
HIF3A-212ENST00000529205 MYOM1P52179 1685 aa19.28■□□□□ 0.68
HIF3A-212ENST00000529205 ACSBG1Q96GR2 724 aa19.28■□□□□ 0.68
HIF3A-212ENST00000529205 ABCC6O95255 1503 aa19.27■□□□□ 0.68
HIF3A-212ENST00000529205 IL2RBP14784 551 aa19.27■□□□□ 0.68
HIF3A-212ENST00000529205 ARXQ96QS3 562 aa19.27■□□□□ 0.68
HIF3A-212ENST00000529205 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.26■□□□□ 0.67
HIF3A-212ENST00000529205 RGPD5Q99666 1765 aa19.26■□□□□ 0.67
HIF3A-212ENST00000529205 NFAT5O94916 1531 aa19.24■□□□□ 0.67
HIF3A-212ENST00000529205 ERBB3P21860 1342 aa19.24■□□□□ 0.67
HIF3A-212ENST00000529205 HDGFL2Q7Z4V5 671 aaPredicted RBP19.23■□□□□ 0.67
HIF3A-212ENST00000529205 SGIP1Q9BQI5 828 aa19.23■□□□□ 0.67
HIF3A-212ENST00000529205 USP31Q70CQ4 1352 aa19.22■□□□□ 0.67
HIF3A-212ENST00000529205 NHSQ6T4R5 1651 aa19.22■□□□□ 0.67
HIF3A-212ENST00000529205 GPR162Q16538 588 aa19.21■□□□□ 0.67
HIF3A-212ENST00000529205 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
HIF3A-212ENST00000529205 ANKRD24Q8TF21 1146 aa19.21■□□□□ 0.67
HIF3A-212ENST00000529205 POLD1P28340 1107 aa19.2■□□□□ 0.66
HIF3A-212ENST00000529205 NEUROD1Q13562 356 aa19.2■□□□□ 0.66
HIF3A-212ENST00000529205 SLC16A10Q8TF71 515 aa19.2■□□□□ 0.66
HIF3A-212ENST00000529205 MAP3K5Q99683 1374 aa19.19■□□□□ 0.66
HIF3A-212ENST00000529205 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
HIF3A-212ENST00000529205 SLC27A3Q5K4L6 730 aa19.19■□□□□ 0.66
HIF3A-212ENST00000529205 NME9Q86XW9 330 aa19.19■□□□□ 0.66
HIF3A-212ENST00000529205 KLHL34Q8N239 644 aa19.18■□□□□ 0.66
HIF3A-212ENST00000529205 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
HIF3A-212ENST00000529205 C1QTNF8P60827 252 aa19.17■□□□□ 0.66
HIF3A-212ENST00000529205 TERF2IPQ9NYB0 399 aa19.17■□□□□ 0.66
HIF3A-212ENST00000529205 ZNF827Q17R98 1081 aa19.16■□□□□ 0.66
HIF3A-212ENST00000529205 DDX54Q8TDD1 881 aaKnown RBP19.16■□□□□ 0.66
HIF3A-212ENST00000529205 MON2Q7Z3U7 1717 aa19.16■□□□□ 0.66
HIF3A-212ENST00000529205 SBNO2Q9Y2G9 1366 aa19.16■□□□□ 0.66
HIF3A-212ENST00000529205 CARD11Q9BXL7 1154 aa19.15■□□□□ 0.66
HIF3A-212ENST00000529205 LRRC4BQ9NT99 713 aa19.15■□□□□ 0.66
HIF3A-212ENST00000529205 PELP1Q8IZL8 1130 aaKnown RBP19.14■□□□□ 0.65
HIF3A-212ENST00000529205 AKT1S1Q96B36 256 aa19.14■□□□□ 0.65
HIF3A-212ENST00000529205 SYTL4Q96C24 671 aaPredicted RBP19.14■□□□□ 0.65
HIF3A-212ENST00000529205 TFCP2L1Q9NZI6 479 aa19.14■□□□□ 0.65
HIF3A-212ENST00000529205 PAPPAQ13219 1627 aa19.14■□□□□ 0.65
HIF3A-212ENST00000529205 CHD4Q14839 1912 aa19.13■□□□□ 0.65
HIF3A-212ENST00000529205 EDC4Q6P2E9 1401 aaKnown RBP19.13■□□□□ 0.65
HIF3A-212ENST00000529205 BTAF1O14981 1849 aa19.13■□□□□ 0.65
HIF3A-212ENST00000529205 IP6K1Q92551 441 aa19.12■□□□□ 0.65
HIF3A-212ENST00000529205 SLC12A5Q9H2X9 1139 aa19.12■□□□□ 0.65
HIF3A-212ENST00000529205 LTN1O94822 1766 aa19.11■□□□□ 0.65
HIF3A-212ENST00000529205 USP54Q70EL1 1684 aa19.11■□□□□ 0.65
HIF3A-212ENST00000529205 LTV1Q96GA3 475 aaPredicted RBP19.11■□□□□ 0.65
HIF3A-212ENST00000529205 GIGYF1O75420 1035 aaPredicted RBP19.1■□□□□ 0.65
HIF3A-212ENST00000529205 CD163L1Q9NR16 1453 aa19.09■□□□□ 0.65
HIF3A-212ENST00000529205 PNPLA7Q6ZV29 1317 aa19.09■□□□□ 0.65
HIF3A-212ENST00000529205 PUS7Q96PZ0 661 aaKnown RBP19.09■□□□□ 0.65
HIF3A-212ENST00000529205 HMGB2P26583 209 aaKnown RBP19.08■□□□□ 0.64
HIF3A-212ENST00000529205 PRIM1P49642 420 aaKnown RBP19.08■□□□□ 0.64
HIF3A-212ENST00000529205 COG3Q96JB2 828 aa19.08■□□□□ 0.64
HIF3A-212ENST00000529205 ANKRD36BQ8N2N9 1353 aa19.07■□□□□ 0.64
HIF3A-212ENST00000529205 MSH5O43196 834 aa19.07■□□□□ 0.64
HIF3A-212ENST00000529205 GRIN3BO60391 1043 aa19.07■□□□□ 0.64
HIF3A-212ENST00000529205 AMPHP49418 695 aa19.07■□□□□ 0.64
HIF3A-212ENST00000529205 KAT6BQ8WYB5 2073 aa19.06■□□□□ 0.64
HIF3A-212ENST00000529205 SLC24A1O60721 1099 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms